prot_L-elsbetiae_contig1040.409.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1040.409.1
Unique Nameprot_L-elsbetiae_contig1040.409.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1283
Homology
BLAST of mRNA_L-elsbetiae_contig1040.409.1 vs. uniprot
Match: D7FMK4_ECTSI (Mediator of RNA polymerase II transcription subunit 14 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMK4_ECTSI)

HSP 1 Score: 1585 bits (4104), Expect = 0.000e+0
Identity = 876/1299 (67.44%), Postives = 976/1299 (75.13%), Query Frame = 0
Query:    1 MASAPSAEGLEGRKVTPLPILSASELSQRLTASAFHDIRRLANVLSRVNLDSRREDLLDYIRSNRARFLKAYAIISWLSGSHKELVVNASTALAEARSQREQIDTCQDQFFFMHGGLFGARQRLYDVPVAVDVLVGGRYPRLPKGIQYCGGDVNPRPIFELPANRDEIVTRMNRAIRLALLRKGGVPNHFTSHVVRNGVLTLTVDGEFELMVTLQGEREDAKWTLLGVMVKVQARQGESITAPTADFRQQRYLQEVVQKAMDVHADANADENPRLMNPLLAAYQVCHDMCCSMVLEILHAQAHRLATRVGGLWAAQLVVAFHKNSQVLDLCLWQREFSSGLGGTGQDVGVGGVRVSEAPLRRQQAATSPRFKEAGTAALPPPPVGCRYLRVHRPVDRHSKMVASLGPLGELLGGSELGRGDGNHTEAGVVMDKETATADAFLVSSVQVHPDKLSCARMLLAAARTFAAQKIKTLVADVEAVAGQLGTCLPRVTTVGGLTACICPWGRGSVAVSVDVKSGRYLVRDTLPSSSKAMTGCISRLREALNLLPRTDSQSLGESIAATLSAGRSVLHKPS-SFQTSRNGEQQDPRQQQVRRCIGESFGLLRRGEVERAFRCALGVVPHARWQALLGRTDTGVMDAGADFSRLDGSGILRSSVRLTQFREDGVRLSDEWRKRTRSYRIRRRGASAIELTRAERAATAGRATTAAPAGAGLNM-------GGIGSSRYWKQGGGAFPA-LAASLAEVSDGADDVLRPIGRSGR------PGTNGNVVSAPLPGSTLEETGEVLSFFLEVGITGSLDVEHTVISATLPTTGRNRGSLRPVVGETYTLFPCQPLSASPCGSLEAALLPSEPPPVLGAKRAASHLDVGDLEEASGIARGVDGGVCHDGLRSSKLHATVGSAVEAAQAQLHRAVQMYHHLVPFARLQHAFLRVGSGLSLDFRELTHFSGTPQQVPRCPVFLAGEHGWSSPEVAATSARVSFFAGHTQADTWEWDVALGPTSGMMDYAGAGGLVVKGEDEEAAATRKLVHQQLPLVQHLEIGGLAESGREGNA---VLGEKRVKFRFPPPFSLHAMCRSFALAGEGLTAMQTLAAQASKLRETGGGGAGYRVVSTSPVHVAMRDPGLDHVVLLTHSAFSERHISSGERPGLVLVSSHNVPTCPAAMRELEASVWKHRDLNALLHGLSRTVAVLAVVSRVVPGVGVASGVDGDRFATGGEFVLSAVSPARFMLSAPLMNQRQCDTRSQPKPTLTLVVETGLRVRISRVGEKDVVADAGALRDLLLEWIASTS 1281
            M   PS E +EGR + PL  L ASEL  R T  AFHDIRRLAN+LSRVN DSRREDLLDYIRSNRARFLKAYAIISWLSG+H ELV NAS ALAEARSQREQID CQDQFFFMHGGLFGARQRLYDVPVAVDVL+GGRYP LPKGI+YCGGD++PRPIFELPANR+EIV R++RAIRLALLR+GGVPN FTSH V+NGVLTLTV+GEFELMVTLQ EREDA+W LLGV + VQAR+GESITAP  DFRQQRYL EV+QKAMDVHAD +A+  P   N LLAAYQVCHD+CCSMVLEILHAQA +LATRVGGLWAAQL V FHK+SQ+                                                                          VA+LGP GE L G  LG   G+H+   V  D+ET+  D+ L SSVQ++PDKLSCARMLLAAAR FA+QK+ TL ADVE+ A QLG C+PRVTTVGGL+A ICPWG G V VSVDVKSGRYLV+DTLP   KAM  CISRLREALNLLP TDSQSLGESIA+TLSAGRSVL K S   Q +RNGEQ D RQQ VRRC+GESFGLLRRGE+E  FRCA GVVPH RWQALLGRTD   +DAG +F RLDGS  LRSSVRL QFRE+GV LS+ WRKRTR++RI RRG SAIELTRAERAAT G+  TAA AGAG  +       G +  S  W+QGGG  PA LAASLAEVSDG DD+     RS R       G+  N V A   G+ LEETGEVLSFFLEV ITG+LDVEHTV+SATLPT GR R SLRPVVGETY LFPCQPLS S CGSL+A LLPS+PPP +G KR+AS LD G  + A GI  GV     HDGL  + LHA VG+  EA+Q QL  AVQM +  VPFARLQHA LRVG+GLSLDFRELTHFSG  QQVP C VFLAGEHGWSSPEVAA+SARVSFF GHTQADTWEWDV LGPT+ +MD+  A  +  K ED+  A TR +VH+QLPL QH+EI G+ + G E ++   +   K V+FRFPPPFS+HAMCRSFALAGEGLT MQTLAAQASKLR+TG   AGY VVS SP+HVAMRD  LDHVVLLTHSAFS RHISS +RPGLVL+   + PTCPAAMRELEASV KHRDLNALLHGLSRTV VLA VSRV+PGVG A+G++GDR  + GEFVL+AV+PARF+LS   + +R    R Q KP LTL VE G +VR+S  G KDVVAD GALR LLLEWIASTS
Sbjct:    1 MEGTPSGEDVEGRLLAPLSTLLASELCLRQTDRAFHDIRRLANILSRVNHDSRREDLLDYIRSNRARFLKAYAIISWLSGNHGELVANASNALAEARSQREQIDACQDQFFFMHGGLFGARQRLYDVPVAVDVLIGGRYPHLPKGIEYCGGDIDPRPIFELPANREEIVLRVDRAIRLALLRRGGVPNQFTSHTVKNGVLTLTVNGEFELMVTLQAEREDARWALLGVTLLVQAREGESITAPVRDFRQQRYLHEVIQKAMDVHADGDANPRP---NALLAAYQVCHDLCCSMVLEILHAQAQKLATRVGGLWAAQLAVMFHKDSQI--------------------------------------------------------------------------VAALGPPGEFLEGRGLGSDVGDHS---VTTDEETSAVDSLLTSSVQIYPDKLSCARMLLAAARIFASQKVNTLAADVESYAAQLGACVPRVTTVGGLSAYICPWGGGGVEVSVDVKSGRYLVKDTLPGGGKAMASCISRLREALNLLPLTDSQSLGESIASTLSAGRSVLQKRSIPTQRARNGEQ-DLRQQHVRRCMGESFGLLRRGELEHTFRCAFGVVPHLRWQALLGRTDANAIDAGTEFPRLDGSDTLRSSVRLGQFRENGVLLSEAWRKRTRNFRILRRGTSAIELTRAERAATIGQVPTAASAGAGFRLNSAPPLDGDLSCSSGWQQGGGTLPAALAASLAEVSDGGDDMAS---RSTRWRTDRGVGSGANGVKASSEGNVLEETGEVLSFFLEVDITGNLDVEHTVVSATLPTAGRARKSLRPVVGETYKLFPCQPLSGSRCGSLDADLLPSKPPPAVGTKRSASCLDAGYSQGAIGITTGV-----HDGLCPTTLHAAVGTVGEASQTQLCTAVQMCNRFVPFARLQHALLRVGTGLSLDFRELTHFSGATQQVPHCAVFLAGEHGWSSPEVAASSARVSFFPGHTQADTWEWDVTLGPTTSLMDFIWA--VPAKDEDKGLAVTRGIVHEQLPLAQHIEILGVRQEGIESSSTTRMAQGKHVRFRFPPPFSVHAMCRSFALAGEGLTVMQTLAAQASKLRQTGCEAAGYSVVSCSPIHVAMRDSKLDHVVLLTHSAFSSRHISSADRPGLVLIPWPHAPTCPAAMRELEASVRKHRDLNALLHGLSRTVPVLAEVSRVLPGVGSAAGMNGDRSPSRGEFVLTAVTPARFVLSKSPLGER----RLQSKPALTLAVEAGGQVRVSTPGRKDVVADTGALRRLLLEWIASTS 1204          
BLAST of mRNA_L-elsbetiae_contig1040.409.1 vs. uniprot
Match: A0A836CA29_9STRA (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA29_9STRA)

HSP 1 Score: 254 bits (650), Expect = 7.840e-66
Identity = 210/687 (30.57%), Postives = 300/687 (43.67%), Query Frame = 0
Query:   17 PLPILSASELSQRLTASAFHDIRRLANVLSRVNLDSRREDLLDYIRSNRARFLKAYAIISWLSG-SHKELVVNASTALAEARSQREQIDTCQDQFFFMHGGLFGARQRLYDVPVAVDVLVGGRYPRLPKGIQYCGGDVNPRPIF--ELPANRDEIVTRMNRAIRLALLRKGGVPNHFTSHVVRNGVLTLTVDGEFELMVTLQGEREDAKWTLLGVMVKVQARQGESITAPTADFRQQRYLQEVVQKAMDVHAD---------------------------------------------------------ANADENPRLMN-PLLAAYQVCHDMCCSMVLEILHAQAHRLATRVGGLWAAQLVVAFHKNSQVLDLCLWQREFSSGLGGTGQDVGVGGVRVSEAPLRRQQAATSPRFKEAGTAALPPPPVGCRYLRVH--RP--VDRHSKMVASLGPLGELLGGSELGRGDGNHTEAGVVMDKETATADAFLVSSVQVHPDKLSCARMLLAAARTFAAQKIKTLVADVEAV------AGQLGTCLPRVTT-VGGLTACICPWGRGSVAVSVDVKSGRYLVRDTLPSSSKAMTGCISRLREALNLLPRTDSQSLGESIAATLSAGRSVLHKPSSFQTSRNGEQQDPRQQQVRRCIGESFGLLRRGEVERAFRCALGVVPHARWQALLGR 631
            P+P + AS L   L   A+ D++ L++ LS  NLD+RRE++L Y+RS RARFLKAYA + WL+   H+EL+ +A  ALA A                  GGLFGARQR +DVP A+DVL  G YPRLP GI +CG D +   +   + P  R  ++ R++RA+RLALL +   P  FTS  VR G L L V  EFEL +TL+GE  DA W L G+ ++V +R GE+I  P  D RQ+ YLQ ++Q+A+D  AD                                                         A AD +  +   PLL AY++ HD C    LE+L  QA  LA R G  W   L     + ++VLD+ +W++E+   L                        A  P  + A    +PPP  G R++RVH  RP   D  + +   LGP                              A+A   +++ +    LS +R++  A RTF  +K+  L  DV A        G       R     GG    +   G G++ ++ D+++GR +V      +    +G  + L EAL L P    ++  +        GR++L                      R  +  +  +      E A  C LG+ P  RW ALLGR
Sbjct:   17 PIPSIPASYLVHLLVEKAYDDLQSLSSALSMENLDTRREEVLAYVRSYRARFLKAYAAVRWLTEFGHRELIADAREALAVAHXXXXXXXXXXXXXXXXXGGLFGARQRPFDVPAALDVLGSGTYPRLPLGIPWCGMDQDESSLVPTDTPEQRASVLARVDRALRLALLVREPFPAGFTSRAVRRGCLYLEVAHEFELRLTLEGEGGDAPWVLRGLDIRVASRAGEAIAPPPVDLRQRVYLQNLLQRALDAAADSASPGGTAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMADASEVVPGRPLLTAYRLAHDFCMGAQLELLSVQAQALA-RPGAPWHGCLRAVLDRAARVLDIIVWEQEYGPAL----------------------PTAAPPPPRGAPVNGVPPPAQG-RFIRVHVQRPETADAEAHIRIQLGP----------------------------GAAEAATEAALHIDAAALSASRLVRDAVRTFTRRKLAVLAPDVAAALRGAPAGGXXXXSGVRARLHAGGRALRVAARGGGALDIAADLRTGRCVVLSERAEARPDASGAHAALLEALALPPGAAGRAHAQ--------GRAML----------------------RARLMAALRMAALDAAEAAAACGLGLEPQWRWGALLGR 621          
BLAST of mRNA_L-elsbetiae_contig1040.409.1 vs. uniprot
Match: A0A662YHC7_9STRA (Mediator of RNA polymerase II transcription subunit 14 (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YHC7_9STRA)

HSP 1 Score: 160 bits (405), Expect = 3.300e-36
Identity = 150/559 (26.83%), Postives = 253/559 (45.26%), Query Frame = 0
Query:   21 LSASELSQRLTASAFHDIRRLANVLSRVNLDSRREDLLDYIRSNRARFLKAYAIISWLSGSHKELVVNASTALAEARSQREQIDTCQDQFFFMHGGLFGARQRLYDVPVAVDVLVGGRYPRLPKGIQYCGGDVNPRPIFELPANRDEIVTRMNRAIRLALLRKGGVPNHFTSHVVRNGVLTLTVDGEFELMVTLQGEREDAKWTLLGV---MVKVQARQGESITAPTADFR----------QQRYLQEVVQKAMDVHADANADENPRLMNPLLAAYQVCHDMCCSMVLEILHAQAHRLATRVGGLWAAQLVVAFHKNSQVLDLCLWQREFSSGLGGTGQDVGVGGVRVSEAPLRRQQAATSPRFKEAGTAALPPPPVGCRYLRVHRPVDRHSKMVASLGPLGELLGGSELGRGDGNHTEAGVVMDKETATADAFLVSSVQVHPDK--LSCARMLLAAARTFAAQKI----KTLVAD-------VEAVAGQLGTCLPRVTT-------VGGLTACICPWGRGSVAVSVDVKSGRYLVRDTLPSSSKAMTGCISRLREALN 546
            + ASEL  R    ++ D R L + L  +  D RRE LL Y++S+R RF +  A++ W       L+    + L +A + R  ++   D+ FFMH  L  A++R YD+  AVDVL GG Y RLP  I+     + PR + E+  + ++  T +   IR  L+ +  +P  FT+ ++  G +T   +GEFE+++T+QG+ +DA W ++ V   +   QA Q  S  A T+  R             +L+ +VQ+AM+           +   P + A++V H+ C S+ L+IL +Q   L   + G W  +++V +H++  VLD+C W +        T ++      +V     R  Q  + P       + LP P      L V    D + K + S+  L   L  +  GR                    A L++++ V P+   LS   +L+ A R   A  +    + LV D        + V+G+  T +   T        +GGL        +  + V+ D++ GR++V     +   A+ G + +L   LN
Sbjct:   12 VKASELVHRAVDKSYEDFRTLMHQLPTMREDERREPLLAYLQSSRKRFAQLLAVMKW--SVQAPLLQQCDSLLQQADNYRNHVNETNDRLFFMHADLNRAKERRYDLSTAVDVLYGGSYLRLPTIIKNA---MFPRELPEV--DTEQASTEVADIIRFRLI-EAEIPAQFTNILLEGGCVTCQAEGEFEIVLTIQGKEKDALWRVISVNTALTDTQAFQDHSQGASTSSLRIINTNAPNAAHYNHLKNLVQRAMN-----------KSDTPFVDAFKVMHEFCSSLALQILFSQGKLL---MEGRWKNRVMVKYHRDQNVLDICYWPKAC------TRKE-----AQVMTEQQRLLQQLSDPAASSRKASQLPYPESS---LCVRLGFDPNQKNLLSVS-LSPSLPPNLPGR--------------------AALLAALAVPPNMFLLSAENLLIGAMRAHVAAALFCVGRLLVVDSPDDKAATQLVSGENVTLVCSATNLRIARSDIGGL--------QHFLEVTFDIREGRFIVNTVAAAKHSALHGTVKQLERILN 505          
BLAST of mRNA_L-elsbetiae_contig1040.409.1 vs. uniprot
Match: K3WKN9_GLOUD (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKN9_GLOUD)

HSP 1 Score: 152 bits (384), Expect = 1.520e-33
Identity = 137/543 (25.23%), Postives = 243/543 (44.75%), Query Frame = 0
Query:   21 LSASELSQRLTASAFHDIRRLANVLSRVNLDSRREDLLDYIRSNRARFLKAYAIISWLSGSHKELVVNASTALAEARSQREQIDTCQDQFFFMHGGLFGARQRLYDVPVAVDVLVGGRYPRLPKGIQYCGGDVNPRPIFELPANRDEIVTRMNRAIRLALLRKGGVPNHFTSHVVRNGVLTLTVDGEFELMVTLQGEREDAKWTLLGV---MVKVQARQGESITAPTADFR----------QQRYLQEVVQKAMDVHADANADENPRLMNPLLAAYQVCHDMCCSMVLEILHAQAHRLATRVGGLWAAQLVVAFHKNSQVLDLCLWQREFSSGLGGTGQDVGVGGVRVSEAPLRRQQAATSPRFKEAGTAALPPPPVGCRYLRVHRPVDRHSKMVASLGPL--GELLGGSELGRGDGNHTEAGVVMDKE-TATADAFLVSSVQVHPDK-LSCARMLLAAARTFAAQKIKTLVADVEAVAGQLGTCLPRVTTVGGLTACICPWGRGSVAVSVDVKSGRYLVRDTLPSSSKAMTGCISRLREALN 546
            + ASEL  R    ++ D R L   L  +  + RRE LL +++ +R RF +  A++ W   S   L+      L +A   R Q++   D+ FFMH  L  A++R YD+  AVDVL GG Y R P         + PR +   P + ++    ++  IR  L+ +  +P  FT+  +  G +T   DGEFE+++T+QG+  D+ W ++ V   +   +A +  S +A T+  R             +L+ +VQ+AM+               P + A++V  + C S+ L+IL +Q   L   + G W  +++V +H++  VLD+C W +        T  D         +    + + + +P  KEA T  LPP P     +R+    ++   +  SL PL    L G +EL        +A V+       +A+  L+++++ H    L C   LL           + +  +   + G   +     + +GGL   +         ++ D++ G+++      + S  ++G I +L   LN
Sbjct:   12 VKASELVHRAVDKSYEDFRSLLMQLPSMREEDRREPLLKHLQDSRKRFAQLLAVLKWSVQS--PLLQQCDNLLTQAEGFRNQVNETNDRLFFMHADLNRAKERKYDLSTAVDVLFGGSYLRFPT---IAKNAMFPRELP--PVDVEQASKEVDDIIRFRLI-EAEIPEQFTNIHLEGGFVTCEADGEFEIVLTIQGKESDSMWRVISVNTALTDPKAFEAHSKSASTSALRIIKTNAPNAVHYNHLKNLVQRAMNKSG-----------TPFVDAFKVMREFCSSLALQILFSQGKLL---MEGRWKNRVMVKYHRDHNVLDICYWPKACVKKEPDTSTD--------QQRLFLQMKESMAPSQKEAST--LPPYPESSLCVRLGFDANQKKLLSVSLNPLLPPNLPGKAEL-------LKALVIPSNMFLLSAENLLIAAMRAHVSAALFCVGRLLVVDPPDENGSTQLVSGESVKLVGSDSSLRISRSDIGGLQEFL--------ELTFDIREGQFMANCVAAAKSPMVSGTIKQLERILN 507          
BLAST of mRNA_L-elsbetiae_contig1040.409.1 vs. uniprot
Match: D0NFV5_PHYIT (Mediator of RNA polymerase II transcription subunit 14 n=21 Tax=Phytophthora TaxID=4783 RepID=D0NFV5_PHYIT)

HSP 1 Score: 149 bits (376), Expect = 1.360e-32
Identity = 102/329 (31.00%), Postives = 170/329 (51.67%), Query Frame = 0
Query:   21 LSASELSQRLTASAFHDIRRLANVLSRVNLDSRREDLLDYIRSNRARFLKAYAIISWLSGSHKELVVNASTALAEARSQREQIDTCQDQFFFMHGGLFGARQRLYDVPVAVDVLVGGRYPRLPKGIQYCGGDVNPRPIFELPA-NRDEIVTRMNRAIRLALLRKGGVPNHFTSHVVRNGVLTLTVDGEFELMVTLQGEREDAKWTLLGV---MVKVQARQGESITAPTADFRQQR----------YLQEVVQKAMDVHADANADENPRLMNPLLAAYQVCHDMCCSMVLEILHAQAHRLATRVGGLWAAQLVVAFHKNSQVLDLCLWQR 335
            + ASEL  R    ++ D R L + L  +  + RRE LL +++S+R RF +  A++ W   S   L+    T L +  + R  ++   D+ FFMH  L  A++R YD+  AVDVL GG Y RLP  I+     + PR   ELP  + ++  T++   IR  L+ +  +P  F++  +  G +T   +GEFE+++T+QG+ +DAKW ++ V   +   QA +  S  A T+  R  R          +L+ +VQ+AM      N  E P      + A+ V  + C S+ L+IL +Q   L   + G W  ++++   ++  +LD+C W +
Sbjct:   12 VKASELVHRAVDKSYEDFRTLMHQLPTMREEERREPLLSHLQSSRKRFAQLLAVLKWSVQS--PLLQQCDTLLQQTETYRNNVNETNDRLFFMHADLNRAKERQYDLSTAVDVLYGGSYLRLPTIIKNA---MFPR---ELPGVDTEQAATKVADIIRFRLI-EAEIPEQFSNIKLEGGFVTCQAEGEFEIVLTIQGKEKDAKWRVISVNTALTDAQAFENHSQAASTSALRIIRTNAPNAAHYNHLKNLVQRAM------NKSEKP-----FVDAFMVMREFCSSLALQILASQGKLL---MEGRWKNRIMIKHLRDQNILDICYWPK 317          
BLAST of mRNA_L-elsbetiae_contig1040.409.1 vs. uniprot
Match: A0A484DSG9_BRELC (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DSG9_BRELC)

HSP 1 Score: 146 bits (369), Expect = 9.140e-32
Identity = 101/327 (30.89%), Postives = 167/327 (51.07%), Query Frame = 0
Query:   23 ASELSQRLTASAFHDIRRLANVLSRVNLDSRREDLLDYIRSNRARFLKAYAIISWLSGSHKELVVNASTALAEARSQREQIDTCQDQFFFMHGGLFGARQRLYDVPVAVDVLVGGRYPRLPKGIQYCGGDVNPRPIFELP-ANRDEIVTRMNRAIRLALLRKGGVPNHFTSHVVRNGVLTLTVDGEFELMVTLQGEREDAKWTLLGVMVKV---QARQGESITAPTADFR----------QQRYLQEVVQKAMDVHADANADENPRLMNPLLAAYQVCHDMCCSMVLEILHAQAHRLATRVGGLWAAQLVVAFHKNSQVLDLCLWQR 335
            ASEL  R    ++ D R L + L  +  D RRE LL +++S+R RF +  A++ W   S   L+      L +  S R  ++   D+ FFMH  L  A++R YD+  AVD+L GG Y RLP  I+     + PR   ELP  N ++   ++   IR  L+    +P HF+   +  G +T   +GEFE+++T+QGE +DAKW ++ V   +   Q  +  S  A T+  R             +L+ +VQ+AM+     N+++      P + A+ V  + C S+ L+IL +Q   L   +   W  ++++  +++  VLD+C W +
Sbjct:   14 ASELVHRAVDKSYEDFRTLMHQLPMMREDERREPLLAHLQSSRKRFAQILAVLKWSVQS--PLMQQCDMLLQQTESYRNNVNETNDRLFFMHADLNRAKERRYDLSTAVDILFGGSYLRLPSIIKNA---MYPR---ELPDVNVEDAAMKVADIIRFRLIETE-IPKHFSKIKLDAGFVTCQAEGEFEIVLTIQGEEKDAKWRVISVNTAITDTQTFEKHSQAASTSALRIIQTNAPNAAHYNHLKNLVQRAMN-----NSEK------PFVDAFIVMREFCSSLALQILASQGKML---MENRWKDRIMIKHYRDQNVLDICYWPK 317          
BLAST of mRNA_L-elsbetiae_contig1040.409.1 vs. uniprot
Match: A0A8K1FHY9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHY9_PYTOL)

HSP 1 Score: 145 bits (367), Expect = 1.560e-31
Identity = 92/317 (29.02%), Postives = 158/317 (49.84%), Query Frame = 0
Query:   23 ASELSQRLTASAFHDIRRLANVLSRVNLDSRREDLLDYIRSNRARFLKAYAIISWLSGSHKELVVNASTALAEARSQREQIDTCQDQFFFMHGGLFGARQRLYDVPVAVDVLVGGRYPRLPKGIQYCGGDVNPRPIFELPANRDEIVTRMNRAIRLALLRKGGVPNHFTSHVVRNGVLTLTVDGEFELMVTLQGEREDAKWTLLGVMVKVQARQGESITAPTADFRQQRYLQEVVQKAMDVHADANADENPRLMN----PLLAAYQVCHDMCCSMVLEILHAQAHRLATRVGGLWAAQLVVAFHKNSQVLDLCLWQR 335
            ASEL  R    ++ D R L   L  +  D RRE LL ++   R RF +  A++ W   S   L++   + L +  + R Q++   D+ FFMH  L  A++R YD+  AVDVL  G Y R P   ++        P+     + DE    ++  IR  L+ +  +P  FT+  +  G +T   +GEFE+++T+QG+ +D+ W ++ V   +   +   + A +A     R ++ +   +   +   N  +  R MN    P + A++V  + C ++ L+IL AQ   L   + G W  +++V +H++  VLDLC W +
Sbjct:   14 ASELVHRAVDKSYEDFRALLLQLPTMREDERREPLLTHLLGARKRFAQLLAVLKWSVQS--PLLLQCESLLEQTETYRNQVNETNDRLFFMHADLNRAKERRYDLSTAVDVLSSGSYLRFPTIAKHAASHRQLPPV-----DTDEAAREVDDIIRFRLI-EAEIPEQFTNIHLEGGFVTCEAEGEFEIVLTIQGKEKDSMWRVISVNTALTDPRAHEVHARSASTSSLRIIKSIAPSSDHYNHLKNLVQ--RTMNKSEKPFVDAFKVMREFCSALALQILFAQGKLL---MDGRWKNRVLVKYHRDHNVLDLCYWPK 317          
BLAST of mRNA_L-elsbetiae_contig1040.409.1 vs. uniprot
Match: A0A2D4BX69_PYTIN (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BX69_PYTIN)

HSP 1 Score: 145 bits (366), Expect = 2.070e-31
Identity = 116/391 (29.67%), Postives = 184/391 (47.06%), Query Frame = 0
Query:   21 LSASELSQRLTASAFHDIRRLANVLSRVNLDSRREDLLDYIRSNRARFLKAYAIISWLSGSHKELVVNASTALAEARSQREQIDTCQDQFFFMHGGLFGARQRLYDVPVAVDVLVGGRYPRLPKGIQYCGGDVNPRPIFELPANRDEIVTRMNRAIRLALLRKGGVPNHFTSHVVRNGVLTLTVDGEFELMVTLQGEREDAKWTLLGVMVKVQARQGESITAPTADFRQQRYLQEVVQKAMDVHADANADENPRLMN----PLLAAYQVCHDMCCSMVLEILHAQAHRLATRVGGLWAAQLVVAFHKNSQVLDLCLWQREFSSGLGGTGQDVGVGGVRVSEAPLRRQQAATSPRFKEAGTAALPPPPVGCRYLRVHRPVDRHSKMVASLGP 407
            + ASEL  R    ++ D+R L   L  +  D RRE LL ++ + R RF +  A++ W   S   L+    + L  A + R Q++   D+ FF+H  L  A++R YD+  A+DVL GG Y R P  +Q+    + PR +   P + D     +   IR  L+ +  +P  FT+  +  G +T   +GEFE+++TLQG+ +D+ W ++ V   +         A  A     R +Q        VH +   +   R MN    P + A++V  + C ++ L+IL AQ   L   + G W  +++V +H++  VLDLC W R        T  D      +   A LR   AA+     +A T   PP P     LR+     + S + A+L P
Sbjct:   12 VKASELLHRAVDKSYEDLRTLLLQLPTLREDERREPLLTHLVAARQRFAQLLALLKWSVQS--PLLQQCESLLERAETYRNQVNETNDRLFFLHADLDRAKERRYDLSTAIDVLSGGSYLRFPTIVQHA---MFPREMP--PVDVDAAAREVEDLIRFRLI-EAEIPEQFTNLRLDGGFVTCEAEGEFEIVLTLQGKAKDSLWRVISVNTALTDTXALETHARHASTNALRIIQSSAPGP--VHYNHLKNLVQRTMNKSERPFVDAFKVMREFCSALALQILSAQGTLL---MDGRWKNRVMVKYHRDHNVLDLCYWPRACVRKEAQTLTD-----QQRMVAQLREAAAASKQTTGQATT--WPPFPDNALCLRLAYDGSKRSLLTATLSP 382          
BLAST of mRNA_L-elsbetiae_contig1040.409.1 vs. uniprot
Match: A0A3M6VE54_9STRA (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VE54_9STRA)

HSP 1 Score: 144 bits (364), Expect = 3.610e-31
Identity = 100/328 (30.49%), Postives = 166/328 (50.61%), Query Frame = 0
Query:   21 LSASELSQRLTASAFHDIRRLANVLSRVNLDSRREDLLDYIRSNRARFLKAYAIISWLSGSHKELVVNASTALAEARSQREQIDTCQDQFFFMHGGLFGARQRLYDVPVAVDVLVGGRYPRLPKGIQYCGGDVNPRPIFELPANRDEIVTRMNRAIRLALLRKGGVPNHFTSHVVRNGVLTLTVDGEFELMVTLQGEREDAKWTLLGVMVKV---QARQGESITAPTADFRQQR----------YLQEVVQKAMDVHADANADENPRLMNPLLAAYQVCHDMCCSMVLEILHAQAHRLATRVGGLWAAQLVVAFHKNSQVLDLCLWQR 335
            + ASEL  R    ++ D R L + L  +  + RRE LL +++++R RF +  A++ W   S   L+    + L +    R  ++   D+ FFMH  L  A++R YD+  AVDVL GG Y RLP  I+     + PR + E+  N DE    +   IR  L+ +  +P   ++  +  G +T  V+GEFE+++T+QG+  DAKW ++ V+  +   +A +  +  A T+  R  R          +L+ +VQ+AM      N  E P      + A+ V    C S+ L+IL +Q   L     G W  ++++  H++  VLD+C W +
Sbjct:   12 VKASELVHRAVDKSYEDFRTLMHQLPTMREEKRREPLLTHLQTSRKRFAQLLAVLKWSVQS--PLLQQCDSLLQQTERYRNNVNETNDRLFFMHADLNRAKERRYDLSTAVDVLYGGSYLRLPTIIKNV---MFPRELPEV--NTDEAAMEVADIIRFRLIGEE-IPEQVSNIKLEGGFVTCQVEGEFEIVLTIQGKENDAKWRVISVITALTEPKAFEDHAQAASTSALRIIRTNSPSAAHYNHLKNLVQRAM------NKSEKP-----FVDAFVVMRQFCSSLALQILASQGKLLTE---GRWKNRIMIKHHRDQNVLDICYWPK 317          
BLAST of mRNA_L-elsbetiae_contig1040.409.1 vs. uniprot
Match: A0A5D6XFC5_9STRA (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XFC5_9STRA)

HSP 1 Score: 144 bits (364), Expect = 3.640e-31
Identity = 115/404 (28.47%), Postives = 186/404 (46.04%), Query Frame = 0
Query:   17 PLPILSASELSQRLTASAFHDIRRLANVLSRVNLDSRREDLLDYIRSNRARFLKAYAIISWLSGSHKELVVNASTALAEARSQREQIDTCQDQFFFMHGGLFGARQRLYDVPVAVDVLVGGRYPRLPKGIQYCGGDVNPRPIFELPANRDEIVTRMNRAIRLALLRKGGVPNHFTSHVVRNGVLTLTVDGEFELMVTLQGEREDAKWTLLGV---MVKVQARQGESITAPTADFR----------QQRYLQEVVQKAMDVHADANADENPRLMNPLLAAYQVCHDMCCSMVLEILHAQAHRLATRVGGLWAAQLVVAFHKNSQVLDLCLWQREFSSGLGGTGQDVGVGGVRVSEAPLRRQQAATSPRFKEAGTAALPPPPVGCRYLRVHRPVDRHSKMVASLGP 407
            P   + ASEL  R    ++ D+R L   L  +  D RRE LL +++  R RF +  A++ W       L+      L  A   R Q++   D+ FF+H  L  A++R YD+  AVDVL GG Y R P   ++    + PR +   P +       ++  IR  L+ +  +P  FT+  +  G +T   +GEFEL++TLQG+  DA W ++ V   +   QA    +  A T+  R             +L+ +VQ+AM+  +DA          P + A++V  + C S+ L+IL +Q   L   + G W  +++V  H+   VLDLC W +        T  D            L+ +++ T+P  +E     LPP P     +R+    ++   +  SL P
Sbjct:    8 PQTSVKASELVHRAVDRSYEDVRALLLQLPSLRADERREPLLKHLQDARKRFAQLLAVLKW--SVQAPLLQQCDELLQHAEGFRNQVNETHDRLFFLHADLDRAKERRYDLSTAVDVLFGGSYLRFPTVAKHA---MYPRALP--PVDAAAAAKEVDDIIRFRLI-EAEIPEQFTNIHLAGGFVTCEAEGEFELVLTLQGKERDALWRVISVNTALTDAQAFAAHAQHASTSALRIIKTNAPSAAHYHHLKHLVQRAMN-KSDA----------PFVDAFRVLREFCSSLALQILLSQGKLL---MDGRWRGRVLVKHHREQNVLDLCYWPKACVKKAPDTATD-------QQRLFLQLKESMTAPARQEH--TPLPPFPESSVCVRLAFDPEKKQLLAVSLSP 380          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1040.409.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMK4_ECTSI0.000e+067.44Mediator of RNA polymerase II transcription subuni... [more]
A0A836CA29_9STRA7.840e-6630.57Mediator of RNA polymerase II transcription subuni... [more]
A0A662YHC7_9STRA3.300e-3626.83Mediator of RNA polymerase II transcription subuni... [more]
K3WKN9_GLOUD1.520e-3325.23Mediator of RNA polymerase II transcription subuni... [more]
D0NFV5_PHYIT1.360e-3231.00Mediator of RNA polymerase II transcription subuni... [more]
A0A484DSG9_BRELC9.140e-3230.89Mediator of RNA polymerase II transcription subuni... [more]
A0A8K1FHY9_PYTOL1.560e-3129.02Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BX69_PYTIN2.070e-3129.67Mediator of RNA polymerase II transcription subuni... [more]
A0A3M6VE54_9STRA3.610e-3130.49Mediator of RNA polymerase II transcription subuni... [more]
A0A5D6XFC5_9STRA3.640e-3128.47Mediator of RNA polymerase II transcription subuni... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013947Mediator complex, subunit Med14PFAMPF08638Med14coord: 23..215
e-value: 7.7E-37
score: 126.6
IPR013947Mediator complex, subunit Med14PANTHERPTHR12809MEDIATOR COMPLEX SUBUNITcoord: 21..335

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1040contigL-elsbetiae_contig1040:1046..7911 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1040.409.1mRNA_L-elsbetiae_contig1040.409.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1040 648..7988 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1040.409.1 ID=prot_L-elsbetiae_contig1040.409.1|Name=mRNA_L-elsbetiae_contig1040.409.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1283bp
MASAPSAEGLEGRKVTPLPILSASELSQRLTASAFHDIRRLANVLSRVNL
DSRREDLLDYIRSNRARFLKAYAIISWLSGSHKELVVNASTALAEARSQR
EQIDTCQDQFFFMHGGLFGARQRLYDVPVAVDVLVGGRYPRLPKGIQYCG
GDVNPRPIFELPANRDEIVTRMNRAIRLALLRKGGVPNHFTSHVVRNGVL
TLTVDGEFELMVTLQGEREDAKWTLLGVMVKVQARQGESITAPTADFRQQ
RYLQEVVQKAMDVHADANADENPRLMNPLLAAYQVCHDMCCSMVLEILHA
QAHRLATRVGGLWAAQLVVAFHKNSQVLDLCLWQREFSSGLGGTGQDVGV
GGVRVSEAPLRRQQAATSPRFKEAGTAALPPPPVGCRYLRVHRPVDRHSK
MVASLGPLGELLGGSELGRGDGNHTEAGVVMDKETATADAFLVSSVQVHP
DKLSCARMLLAAARTFAAQKIKTLVADVEAVAGQLGTCLPRVTTVGGLTA
CICPWGRGSVAVSVDVKSGRYLVRDTLPSSSKAMTGCISRLREALNLLPR
TDSQSLGESIAATLSAGRSVLHKPSSFQTSRNGEQQDPRQQQVRRCIGES
FGLLRRGEVERAFRCALGVVPHARWQALLGRTDTGVMDAGADFSRLDGSG
ILRSSVRLTQFREDGVRLSDEWRKRTRSYRIRRRGASAIELTRAERAATA
GRATTAAPAGAGLNMGGIGSSRYWKQGGGAFPALAASLAEVSDGADDVLR
PIGRSGRPGTNGNVVSAPLPGSTLEETGEVLSFFLEVGITGSLDVEHTVI
SATLPTTGRNRGSLRPVVGETYTLFPCQPLSASPCGSLEAALLPSEPPPV
LGAKRAASHLDVGDLEEASGIARGVDGGVCHDGLRSSKLHATVGSAVEAA
QAQLHRAVQMYHHLVPFARLQHAFLRVGSGLSLDFRELTHFSGTPQQVPR
CPVFLAGEHGWSSPEVAATSARVSFFAGHTQADTWEWDVALGPTSGMMDY
AGAGGLVVKGEDEEAAATRKLVHQQLPLVQHLEIGGLAESGREGNAVLGE
KRVKFRFPPPFSLHAMCRSFALAGEGLTAMQTLAAQASKLRETGGGGAGY
RVVSTSPVHVAMRDPGLDHVVLLTHSAFSERHISSGERPGLVLVSSHNVP
TCPAAMRELEASVWKHRDLNALLHGLSRTVAVLAVVSRVVPGVGVASGVD
GDRFATGGEFVLSAVSPARFMLSAPLMNQRQCDTRSQPKPTLTLVVETGL
RVRISRVGEKDVVADAGALRDLLLEWIASTSR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013947Mediator_Med14