prot_L-elsbetiae_contig10352.384.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10352.384.1
Unique Nameprot_L-elsbetiae_contig10352.384.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length236
Homology
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BLAST of mRNA_L-elsbetiae_contig10352.384.1 vs. uniprot
Match: A0A6H5KCT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT0_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 3.720e-47
Identity = 129/257 (50.19%), Postives = 153/257 (59.53%), Query Frame = 0 
Query:    1 QLLQPIFRQERTLIAAVRPQSLRAMAVGGGPSRPIMVFASTRPSDGSPVLTVLDTDTAIAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGSLS---------RDGLG------------EVELSTRCCSKSVFAASPHAVFINPANVKAFVCGGGGXXXXXXXXXXXXXXGLPAASQGPQRTPSPSPGGGGRVHLKFSMVVAEASLTEAGRLTLRAWEQTHVGDAHRVAAEAERLGLLAFCDPYSE 236
            Q L P+  ++R LI  VRPQSLRAMAVGGG S P+M+ AS RPSDGSPVL VLDTD A+AA XXXXXXXXXXXXXXXXX                     G++          +DG G            EVEL+TRCCSKSVF A PHAVF++PA VKAFVC                   +P +S       +PSP    ++HLKF +++AEASL E GR  LRAWEQ+H G AH+VA +AE LGLL +CDP  E
Sbjct:  516 QALPPLVTRQRPLIPGVRPQSLRAMAVGGGRSLPVMILASFRPSDGSPVLIVLDTDAALAAAXXXXXXXXXXXXXXXXXGFATKGESGKNPEPLWSSSTGGAVDGRGGRGGGLQDGGGGVVISGERGDEHEVELATRCCSKSVFPARPHAVFVDPAEVKAFVCR---RRRRRWRCGDDCVVVVPGSSALAPPLSAPSPPDKDKLHLKFPVILAEASLDETGRPRLRAWEQSHAGLAHKVAVDAEVLGLLGYCDPSEE 769
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BLAST of mRNA_L-elsbetiae_contig10352.384.1 vs. uniprot
Match: D7FN13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN13_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 3.060e-29
Identity = 67/127 (52.76%), Postives = 83/127 (65.35%), Query Frame = 0 
Query:  110 EVELSTRCCSKSVFAASPHAVFINPANVKAFVCGGGGXXXXXXXXXXXXXXGLPAASQGPQRTPSPSPGGGGRVHLKFSMVVAEASLTEAGRLTLRAWEQTHVGDAHRVAAEAERLGLLAFCDPYSE 236
            EVEL+TRCCSKSVF A PHAVF++PA +KAFVC                   +P +S      P+PSP    ++HLKF +++AEASL E GR  LRAWEQ+H G AH+VA +AE LGLLA+CDP  E
Sbjct:  500 EVELATRCCSKSVFPARPHAVFVDPAELKAFVCR---RRRRRWGYGDDGVVVVPGSSALAPPFPAPSPPDKDKLHLKFPVILAEASLDETGRPRLRAWEQSHAGFAHKVAVDAEVLGLLAYCDPSEE 623
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10352.384.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KCT0_9PHAE3.720e-4750.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN13_ECTSI3.060e-2952.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10352contigL-elsbetiae_contig10352:468..3218 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10352.384.1mRNA_L-elsbetiae_contig10352.384.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10352 468..3218 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10352.384.1 ID=prot_L-elsbetiae_contig10352.384.1|Name=mRNA_L-elsbetiae_contig10352.384.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=236bp
QLLQPIFRQERTLIAAVRPQSLRAMAVGGGPSRPIMVFASTRPSDGSPVL
TVLDTDTAIAAAAAAAAAAAAAVTGTGSAGAGGASGAPYSGFSGGGGGED
GSLSRDGLGEVELSTRCCSKSVFAASPHAVFINPANVKAFVCGGGGGGGG
RGGGRGGEGGGLPAASQGPQRTPSPSPGGGGRVHLKFSMVVAEASLTEAG
RLTLRAWEQTHVGDAHRVAAEAERLGLLAFCDPYSE
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