prot_L-elsbetiae_contig10346.379.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10346.379.1
Unique Nameprot_L-elsbetiae_contig10346.379.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length159
Homology
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BLAST of mRNA_L-elsbetiae_contig10346.379.1 vs. uniprot
Match: D8LJI6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJI6_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 8.650e-15
Identity = 34/43 (79.07%), Postives = 39/43 (90.70%), Query Frame = 0 
Query:  105 SMEKGCREDGCNRRPIYAYKGSTRAAFCARHRLAGMIDTRHPL 147
            S  +GC+EDGC+RRPIYAYKGS +AA+CARHRL GMIDTRHPL
Sbjct:  461 SSGRGCKEDGCDRRPIYAYKGSKKAAYCARHRLTGMIDTRHPL 503
[Close]
BLAST of mRNA_L-elsbetiae_contig10346.379.1 vs. uniprot
Match: D8LBU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBU9_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 3.290e-13
Identity = 35/66 (53.03%), Postives = 44/66 (66.67%), Query Frame = 0 
Query:   94 RERSDPVPPGGSMEKGCREDGCNRRPIYAYKGSTRAAFCARHRLAGMIDTRHPLCKDEQCTRQPSF 159
            +E    V P G+    CR+ GC+RRPIYA+KG T+A  C  HR A M++ RHPLC+ E C RQPSF
Sbjct:  444 KETGTTVAPKGAQA--CRDVGCHRRPIYAFKGDTKALCCPIHRSAEMVNVRHPLCRHESCFRQPSF 507
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BLAST of mRNA_L-elsbetiae_contig10346.379.1 vs. uniprot
Match: A0A6H5K8Z0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z0_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 4.050e-8
Identity = 27/44 (61.36%), Postives = 33/44 (75.00%), Query Frame = 0 
Query:   93 RRERSDPVPPGGSMEKGCREDGCNRRPIYAYKGSTRAAFCARHR 136
            RR  +   P   S  +GC+EDGC+RRPIYAYKGS +AA+CARHR
Sbjct:  531 RRAANAATPSAPSSGRGCKEDGCDRRPIYAYKGSKKAAYCARHR 574
[Close]
BLAST of mRNA_L-elsbetiae_contig10346.379.1 vs. uniprot
Match: A0A6H5KXM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM5_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 1.710e-6
Identity = 27/54 (50.00%), Postives = 35/54 (64.81%), Query Frame = 0 
Query:   94 RERSDPVPPGGSMEKGCREDGCNRRPIYAYKGSTRAAFCARHRLAGMIDTRHPL 147
            +E    V P G+    CR+ GC+RRPIYA+KG T+A  C  HR A M++ RHPL
Sbjct:  602 KETGTTVAPKGAQA--CRDVGCHRRPIYAFKGDTKALCCPIHRSAEMVNVRHPL 653
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10346.379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJI6_ECTSI8.650e-1579.07EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LBU9_ECTSI3.290e-1353.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8Z0_9PHAE4.050e-861.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXM5_9PHAE1.710e-650.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10346contigL-elsbetiae_contig10346:2333..4168 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10346.379.1mRNA_L-elsbetiae_contig10346.379.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10346 2332..4168 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10346.379.1 ID=prot_L-elsbetiae_contig10346.379.1|Name=mRNA_L-elsbetiae_contig10346.379.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=159bp
SDPGLYSATVPPLRAGPSGSSARPPPYPLLGLAGEAADEPAGGEGGGGRN
VSLGELRAGSAGADASAGAGAGAGAGAVAGAGAGAGAVEGAGRRERSDPV
PPGGSMEKGCREDGCNRRPIYAYKGSTRAAFCARHRLAGMIDTRHPLCKD
EQCTRQPSF
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