prot_L-elsbetiae_contig10330.370.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10330.370.1
Unique Nameprot_L-elsbetiae_contig10330.370.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length195
Homology
BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Match: D7G127_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G127_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 1.460e-83
Identity = 136/194 (70.10%), Postives = 162/194 (83.51%), Query Frame = 0
Query:    1 MGLTMCLAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEKKKAEPVRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVFVMVVMFSVQKSFAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIFALCQAGVKGNIAKLVGVGQPKGMKEPSPFAELSAPADEGHAKDQ 194
            MG+ MC+ ++ALSAL AL  EA+SWY VYRKPEYQ+LKRHIE LV+D+EKKKAEPV    S ++K K+ + +SRLEKDLA+A+K+LQ L   +K++VAV +MVVM ++ KSFAGIVVAKLPFVP SL+Q ISHR L+GEDPTDCSVAFIFALCQAGVKGNI KLVGVG PKGMKE +PFAEL AP +E HAK Q
Sbjct:    1 MGVLMCVVIMALSALIALLTEAYSWYTVYRKPEYQRLKRHIENLVKDVEKKKAEPV--GGSVERKVKNLKALSRLEKDLAEATKDLQALTMSNKLVVAVTLMVVMIAINKSFAGIVVAKLPFVPISLVQKISHRALEGEDPTDCSVAFIFALCQAGVKGNIVKLVGVGHPKGMKEANPFAELGAPVEEDHAKVQ 192          
BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Match: A0A2J6LTV4_LACSA (Calcium load-activated calcium channel n=2 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6LTV4_LACSA)

HSP 1 Score: 112 bits (280), Expect = 8.820e-28
Identity = 67/174 (38.51%), Postives = 101/174 (58.05%), Query Frame = 0
Query:    7 LAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEKKKAEPVRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVFVMVVMFSVQKS-FAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIFALCQAGVKGNIAKLVGVGQPKGMKEPSPF 179
            L +  +S  TA+  EA SW ++YR+  Y+ LK  I+   + +E  K  P  +  S+ KK      +SR+E  L D+S++L      S  +VA+ V+ V+F V  S + G  V KLPFVP S++Q +SHR L G+DPTDCS+AF++ LC   ++ N+ K +G   P+G   P  F
Sbjct:   11 LTIAGISLFTAIVCEAISWLLIYRRTSYKSLKSTIDQASKKLETMKTTPTTLKKSKAKK------ISRVETSLKDSSRDLSLSKFKSGAVVAL-VLAVVFGVMNSLYEGKAVGKLPFVPVSIVQKMSHRGLRGDDPTDCSMAFLYFLCSMSIRTNLQKFLGFSPPRGAAGPGLF 177          
BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Match: A0A0A0LGX0_CUCSA (Calcium load-activated calcium channel n=7 Tax=fabids TaxID=91835 RepID=A0A0A0LGX0_CUCSA)

HSP 1 Score: 111 bits (278), Expect = 1.950e-27
Identity = 62/166 (37.35%), Postives = 98/166 (59.04%), Query Frame = 0
Query:    7 LAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEKKKAEPVRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVFVMVVMFSVQKSFAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIFALCQAGVKGNIAKLVGVGQPKG 172
            L+V+ +S  TA+  EA SW ++YR   Y+ L+  I+   + +E  K +  +IT  + K KK    + R+E  L ++S++L      S  +VA+ + VV   +   F G VVAKLPF PF L+  +SHR L G+DPTDC++AF++ LC   ++ N+ K +G   P+G
Sbjct:   16 LSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKK----IDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRG 177          
BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Match: W9SNZ3_9ROSA (Calcium load-activated calcium channel n=7 Tax=fabids TaxID=91835 RepID=W9SNZ3_9ROSA)

HSP 1 Score: 110 bits (276), Expect = 3.880e-27
Identity = 63/166 (37.95%), Postives = 95/166 (57.23%), Query Frame = 0
Query:    7 LAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEKKKAEPVRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVFVMVVMFSVQKSFAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIFALCQAGVKGNIAKLVGVGQPKG 172
            L V+ +S  TA+  EA SW ++YR   Y+ L+  I+   + +E  K E  +I   + K KK    + R+E  L ++S++L      S  +VA+ + VV   +   F G VVAKLPF PF L+  +SHR L G DPTDCS+AF++ LC   ++ N+ K +G   P+G
Sbjct:   16 LRVVGISICTAVVCEAISWLLIYRTNSYKSLRSSIDKAAKKLETMKTESAKIAAKKSKTKK----IDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRG 177          
BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Match: A0A1S4CK71_TOBAC (Calcium load-activated calcium channel n=4 Tax=Nicotiana TaxID=4085 RepID=A0A1S4CK71_TOBAC)

HSP 1 Score: 109 bits (272), Expect = 1.420e-26
Identity = 63/166 (37.95%), Postives = 94/166 (56.63%), Query Frame = 0
Query:    7 LAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEKKKAEPVRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVFVMVVMFSVQKSFAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIFALCQAGVKGNIAKLVGVGQPKG 172
            L ++ +S  TA+  EA SW ++YR   Y  LK +I     D   KK E ++  +S  KK    + + R E  L D+S++L      S  +VA+ + +V   +   F G VVAKLPFVPF ++Q +SHR L G D TDCS+AF++ LC   ++ N+ K +G   P+G
Sbjct:   15 LTIVGISICTAVICEAISWVLIYRTTSYNSLKSNI-----DKASKKLETMKTLES--KKPNKSKKIDRFETSLKDSSRDLSLFKFKSGFVVAIVLFMVFAFLNSLFEGKVVAKLPFVPFRIIQKMSHRGLSGNDMTDCSMAFLYLLCSMSIRTNLQKFLGFSPPRG 173          
BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Match: A0A834YYW8_9MAGN (Calcium load-activated calcium channel n=2 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834YYW8_9MAGN)

HSP 1 Score: 109 bits (272), Expect = 1.460e-26
Identity = 67/179 (37.43%), Postives = 101/179 (56.42%), Query Frame = 0
Query:    7 LAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEKKKAEPVRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVFVMVVMFSVQKSFAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIFALCQAGVKGNIAKLVGVGQPKGMKEPSPFAELSAP 185
            LAV+ +S  TA   EA SW ++YR   Y+ L+  I     D   KK E ++  D   KK K++++  R+E  L ++S++L      S  +VA+ + VV   +   F G  VAKLPFVP S++Q +SHR L G+DPTDCS+AF++ LC   ++ N+ K +G   P+G    +    L  P
Sbjct:   14 LAVVGISICTAFLCEAISWLLIYRTSSYKSLRSSI-----DKASKKLESMKTLDKPSKKSKTKKM-DRVETSLKESSRDLSFSKFKSGAVVALVLFVVFGLLNSLFEGKPVAKLPFVPASIVQKMSHRGLQGDDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAANAAGLFPLPDP 186          
BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Match: A0A2C9V7M7_MANES (Calcium load-activated calcium channel n=3 Tax=rosids TaxID=71275 RepID=A0A2C9V7M7_MANES)

HSP 1 Score: 108 bits (270), Expect = 3.130e-26
Identity = 61/166 (36.75%), Postives = 96/166 (57.83%), Query Frame = 0
Query:    7 LAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEKKKAEPVRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVFVMVVMFSVQKSFAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIFALCQAGVKGNIAKLVGVGQPKG 172
            L V+A+S  TA+  EA SW ++YR   Y+ LK  I+   + +E  K E  ++T  + K KK    + R+E  L ++S++L      S  +VA+ + +V   +   F G VVAKLPF P  ++  +SHR L G+D TDCS+AF++ LC   ++ N+ K +G   P+G
Sbjct:   16 LTVVAISICTAVVCEAISWILIYRTNSYKSLKSSIDKASKKLETMKTETAKVTIKKSKTKK----IDRVETSLKESSRDLSLFKFKSGAVVALVLFIVFGLLNSLFEGKVVAKLPFKPIGIVMKMSHRGLQGDDATDCSMAFLYFLCSISIRTNLQKFLGFSPPRG 177          
BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Match: A0A6P4BNF6_ARADU (Calcium load-activated calcium channel n=8 Tax=Fabaceae TaxID=3803 RepID=A0A6P4BNF6_ARADU)

HSP 1 Score: 108 bits (269), Expect = 4.080e-26
Identity = 63/166 (37.95%), Postives = 95/166 (57.23%), Query Frame = 0
Query:    7 LAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEKKKAEPVRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVFVMVVMFSVQKSFAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIFALCQAGVKGNIAKLVGVGQPKG 172
            L V+ +S  TA+  EA SW ++YR   Y+ L+  I+   + +E  K E  +I   + K KK    + R+E  L ++S++L      S  +VA+ + VV   +   F G VVAKLPF PF L+  +SHR L G DPTDCS+AF++ LC   ++ N+ K +G   P+G
Sbjct:   14 LTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTESNKINIKKSKTKK----IDRVETSLKESSRDLSLFKFKSGGVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGSDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRG 175          
BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Match: A0A118JTC9_CYNCS (Calcium load-activated calcium channel n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A118JTC9_CYNCS)

HSP 1 Score: 108 bits (269), Expect = 4.190e-26
Identity = 59/173 (34.10%), Postives = 96/173 (55.49%), Query Frame = 0
Query:    7 LAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEKKKAEPVRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVFVMVVMFSVQKSFAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIFALCQAGVKGNIAKLVGVGQPKGMKEPSPF 179
            L +  +S  TA+  EA SW ++YR+  Y+ LK  I+   + +E  K +   +  S+ KK      + R+E  L ++S++L      S  +VA+ +  V   +   + G  VAKLPF+P  ++Q +SHR L G+DPTDCS+AF++ LC   ++ N+ K +G   P+G     PF
Sbjct:   15 LTIAGISFFTAIVCEAISWLLIYRRTSYKSLKSTIDKASKKLETMKTDSTALRKSKTKK------IDRVETSLKESSRDLSLFKFKSGAVVALILFAVFGFLNSLYEGKAVAKLPFIPLRIVQKMSHRGLQGDDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAAGAGPF 181          
BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Match: A0A2P5C5L7_TREOI (Calcium load-activated calcium channel n=1 Tax=Trema orientale TaxID=63057 RepID=A0A2P5C5L7_TREOI)

HSP 1 Score: 107 bits (268), Expect = 6.220e-26
Identity = 63/167 (37.72%), Postives = 96/167 (57.49%), Query Frame = 0
Query:    7 LAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEKKKAEP-VRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVFVMVVMFSVQKSFAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIFALCQAGVKGNIAKLVGVGQPKG 172
            L V+ +S  TA+  EA SW ++YR   Y+ L+  I+   + +E  K E   +I   + K KK    + R+E  L ++S++L      S  +VA+ + VV   +   F G VVAKLPF PF L+  +SHR L G+DPTDCS+AF++ LC   ++ N+ K +G   P+G
Sbjct:   16 LRVVGISICTAVVCEAISWILIYRTNSYKSLRSSIDKAAKKLENMKTETSAKIAAKKSKTKK----IDRVESSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRG 178          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10330.370.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G127_ECTSI1.460e-8370.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2J6LTV4_LACSA8.820e-2838.51Calcium load-activated calcium channel n=2 Tax=Lac... [more]
A0A0A0LGX0_CUCSA1.950e-2737.35Calcium load-activated calcium channel n=7 Tax=fab... [more]
W9SNZ3_9ROSA3.880e-2737.95Calcium load-activated calcium channel n=7 Tax=fab... [more]
A0A1S4CK71_TOBAC1.420e-2637.95Calcium load-activated calcium channel n=4 Tax=Nic... [more]
A0A834YYW8_9MAGN1.460e-2637.43Calcium load-activated calcium channel n=2 Tax=Tet... [more]
A0A2C9V7M7_MANES3.130e-2636.75Calcium load-activated calcium channel n=3 Tax=ros... [more]
A0A6P4BNF6_ARADU4.080e-2637.95Calcium load-activated calcium channel n=8 Tax=Fab... [more]
A0A118JTC9_CYNCS4.190e-2634.10Calcium load-activated calcium channel n=1 Tax=Cyn... [more]
A0A2P5C5L7_TREOI6.220e-2637.72Calcium load-activated calcium channel n=1 Tax=Tre... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 34..54
NoneNo IPR availableCOILSCoilCoilcoord: 58..85
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..94
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..118
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 119..194
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..22
score: 0.582
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 96..118
IPR002809Integral membrane protein EMC3/TMCO1-likeSMARTSM01415DUF106_2coord: 5..169
e-value: 1.4E-12
score: 57.8
IPR002809Integral membrane protein EMC3/TMCO1-likePFAMPF01956EMC3_TMCO1coord: 6..168
e-value: 7.7E-25
score: 87.6
IPR008559Calcium load-activated calcium channelPANTHERPTHR20917PNAS-RELATEDcoord: 8..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10330contigL-elsbetiae_contig10330:1235..6024 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10330.370.1mRNA_L-elsbetiae_contig10330.370.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10330 1235..6045 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10330.370.1 ID=prot_L-elsbetiae_contig10330.370.1|Name=mRNA_L-elsbetiae_contig10330.370.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=195bp
MGLTMCLAVIALSALTALFAEAFSWYMVYRKPEYQKLKRHIEMLVRDIEK
KKAEPVRITDSEDKKKKSQRVVSRLEKDLADASKELQTLATPSKMMVAVF
VMVVMFSVQKSFAGIVVAKLPFVPFSLLQNISHRKLDGEDPTDCSVAFIF
ALCQAGVKGNIAKLVGVGQPKGMKEPSPFAELSAPADEGHAKDQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002809EMC3/TMCO1
IPR008559TMCO1