prot_L-elsbetiae_contig10327.367.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10327.367.1
Unique Nameprot_L-elsbetiae_contig10327.367.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length358
Homology
BLAST of mRNA_L-elsbetiae_contig10327.367.1 vs. uniprot
Match: A0A6H5JZR4_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZR4_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 1.530e-109
Identity = 188/257 (73.15%), Postives = 207/257 (80.54%), Query Frame = 0
Query:  113 LPSADNAFMPLCQFFGFPASAEAVLAEPGLVDAARRWLACVADTTASHMARASPLPAAAEQI---STGDWVLLGRREAVSRRLFDFPSPLKIELVRLPHAYTELHAQVSTSTSXXXXXXXXXXXXXXGPGVDR---------VGHPAVCLVCGKVLDASGRGACTRHARDCGCGLGLLFLLQECAVLLIHGRRASYFPSPYVDAYGERQRHTFRGRPLFLDQRRYDVVRGLWAKHLVAHEVVQNRSTSRQVIITNHY 357
            LPSAD+AF PLC+FFGFP SAEA+LAEPGL+DAARRWLACV+ +    +     LPA    +   + G  +L  RRE V RRLFDFPSP+KI+LVRLPHAYTELHAQVS+S  XXXXXXXXXXXXXX                GHPAVCLVCG+VLDASGRG CTRHA +CGCG GL FLLQECAVLLIHGRRA+YFPSPYVDAYGERQRH+FRGRPL+LDQRRYDVVRGLW KHLVAHEVVQNRSTSRQVII +HY
Sbjct:   89 LPSADDAFSPLCRFFGFPTSAEALLAEPGLLDAARRWLACVSGS--ETVLGPGALPADGGPVVGNTVGSLLLRLRRENVCRRLFDFPSPVKIDLVRLPHAYTELHAQVSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGHPAVCLVCGEVLDASGRGECTRHAAECGCGTGLFFLLQECAVLLIHGRRAAYFPSPYVDAYGERQRHSFRGRPLYLDQRRYDVVRGLWVKHLVAHEVVQNRSTSRQVIINDHY 343          
BLAST of mRNA_L-elsbetiae_contig10327.367.1 vs. uniprot
Match: A0A7S2H0X4_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H0X4_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.400e-46
Identity = 88/166 (53.01%), Postives = 111/166 (66.87%), Query Frame = 0
Query:  192 LFDFPSPLKIELVRLPHAYTELHAQVSTSTSXXXXXXXXXXXXXXGPGVDRVGHPAVCLVCGKVLDASGRGACTRHARDCGCGLGLLFLLQECAVLLIHGRRASYFPSPYVDAYGERQRHTFRGRPLFLDQRRYDVVRGLWAKHLVAHEVVQNRSTSRQVIITNHY 357
            L D P+  ++++V LPHAYTELH+ +++ TS                      HPAVCL+CG VL   G+G CT+HA+ CG G+G+ FLLQEC+VLLIHG RA YF SPYVDA+GER    FRGRPLFLD  R +V+R L A H V  +VV +RSTSRQVII ++Y
Sbjct:  157 LSDLPAKCRVDMVDLPHAYTELHSDLTSQTSSE--------------------HPAVCLMCGAVLCGDGKGECTKHAKICGLGVGIFFLLQECSVLLIHGPRACYFASPYVDAHGERHAQ-FRGRPLFLDPNRLEVLRLLAASHEVPAKVVHSRSTSRQVIINSYY 301          
BLAST of mRNA_L-elsbetiae_contig10327.367.1 vs. uniprot
Match: A0A7S2SNG9_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNG9_9STRA)

HSP 1 Score: 158 bits (400), Expect = 3.160e-40
Identity = 86/189 (45.50%), Postives = 113/189 (59.79%), Query Frame = 0
Query:  169 AAAEQISTGDWVLLGRREAVSRRLFDFPSPLKIELVRLPHAYTELHAQVSTSTSXXXXXXXXXXXXXXGPGVDRVGHPAVCLVCGKVLDASGRGACTRHARDCGCGLGLLFLLQECAVLLIHGRRASYFPSPYVDAYGERQRHTFRGRPLFLDQRRYDVVRGLWAKHLVAHEVVQNRSTSRQVIITNHY 357
            AAA  +   +W L    +A+     D+P+   +ELV LP  YTELHAQV+  +                        PA+CLVCG+VL A G+G CT+HA+ C  G+G  FLLQEC+VL +HG R+ YF SPYVDA+GER  H FRGRPL+ D  R +V+R + A+H +  +VV  RS SRQVII  +Y
Sbjct:  377 AAAVALEQEEWELRSPSDALHYMWTDYPTFRPVELVSLPREYTELHAQVTAVSDSE--------------------RPALCLVCGQVLAADGKGLCTQHAQTCNVGVGAFFLLQECSVLFVHGPRSCYFASPYVDAHGERHGH-FRGRPLYTDPLRINVLRDIVARHEIPIKVVHTRSISRQVIIPEYY 544          
BLAST of mRNA_L-elsbetiae_contig10327.367.1 vs. uniprot
Match: A0A835YQN3_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQN3_9STRA)

HSP 1 Score: 159 bits (402), Expect = 2.270e-39
Identity = 102/251 (40.64%), Postives = 129/251 (51.39%), Query Frame = 0
Query:  107 DGAAVALPSADNAFMPLCQFFGFPASAEAVLAEPGLVDAARRWLACVADTTASHMARASPLPAAAEQISTGDWVLLGRREAVSRRLFDFPSPLKIELVRLPHAYTELHAQVSTSTSXXXXXXXXXXXXXXGPGVDRVGHPAVCLVCGKVLDASGRGACTRHARDCGCGLGLLFLLQECAVLLIHGRRASYFPSPYVDAYGERQRHTFRGRPLFLDQRRYDVVRGLWAKHLVAHEVVQNRSTSRQVIITNHY 357
            DGAA+    +D+    LC FFG P S  AVL +  +      WLA              PL  A E               V  R   +P    + LV LP +YT+LHA + TST                P       PAVCLVCG+ +   G G+C +HA  C    G+ FLLQEC VLL  G+RA+YF SPYVDAYGER R   RGRPLF+D+RRY V+R L+A+H VA EV + RS+ R+V+   +Y
Sbjct: 1564 DGAALPPEQSDDEMASLCGFFGMPTSLTAVLQDRDVRHLVSLWLA--------------PLTFALE--------------LVQLRYLSYPVGFSVRLVDLPKSYTDLHALL-TST----------------PRPPSDAFPAVCLVCGQAVSCGGDGSCWKHAAACSPNAGVFFLLQECTVLLTRGKRAAYFASPYVDAYGERHRQP-RGRPLFMDERRYSVLRDLYARHAVAAEVARIRSSGREVLHAGYY 1768          
BLAST of mRNA_L-elsbetiae_contig10327.367.1 vs. uniprot
Match: A0A6S9LH47_HETAK (E3 ubiquitin-protein ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LH47_HETAK)

HSP 1 Score: 137 bits (345), Expect = 1.070e-36
Identity = 68/100 (68.00%), Postives = 74/100 (74.00%), Query Frame = 0
Query:  258 ASGRGACTRHARDCGCGLGLLFLLQECAVLLIHGRRASYFPSPYVDAYGERQRHTFRGRPLFLDQRRYDVVRGLWAKHLVAHEVVQNRSTSRQVIITNHY 357
            A GRG CT HA  CG G+GL FLLQEC VLL+HGRRA+YFPSPYVDAYGER +  FRGRPL+LD RR  VV  LW  H V  EV Q R T RQVIIT +Y
Sbjct:    1 ADGRGECTAHAARCGRGVGLFFLLQECQVLLLHGRRAAYFPSPYVDAYGERHKQ-FRGRPLYLDARRLAVVAALWRAHGVPREVAQRRGTHRQVIITGYY 99          
BLAST of mRNA_L-elsbetiae_contig10327.367.1 vs. uniprot
Match: K8YUN0_NANGC (E3 ubiquitin-protein ligase n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YUN0_NANGC)

HSP 1 Score: 145 bits (366), Expect = 9.650e-35
Identity = 72/116 (62.07%), Postives = 89/116 (76.72%), Query Frame = 0
Query:  242 RVGHPAVCLVCGKVLDASGRGACTRHARDCGCGLGLLFLLQECAVLLIHGRRASYFPSPYVDAYGERQRHTFRGRPLFLDQRRYDVVRGLWAKHLVAHEVVQNRSTSRQVIITNHY 357
            RV +P +CLVC   L+A GRG CT HAR CG G+G+ FLLQ+C+VLLI+  RA YFPSPYVD YGER +  FRGRPL LD+RR + +R +WAK  V +EVVQ RSTS+ VI+TN+Y
Sbjct:  725 RVENPVLCLVCNAALEA-GRGRCTAHARACGRGVGVFFLLQDCSVLLIYLDRACYFPSPYVDVYGERHKQ-FRGRPLHLDERRLEALRRVWAKQRVPYEVVQARSTSKHVILTNYY 838          
BLAST of mRNA_L-elsbetiae_contig10327.367.1 vs. uniprot
Match: A0A7S2ML06_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2ML06_9STRA)

HSP 1 Score: 132 bits (333), Expect = 2.220e-32
Identity = 61/111 (54.95%), Postives = 82/111 (73.87%), Query Frame = 0
Query:  247 AVCLVCGKVLDASGRGACTRHARDCGCGLGLLFLLQECAVLLIHGRRASYFPSPYVDAYGERQRHTFRGRPLFLDQRRYDVVRGLWAKHLVAHEVVQNRSTSRQVIITNHY 357
            A+CLVCG++L+A G+G CT HA +CG G G+ FLLQEC  L++HG +A+Y  SPYVD++GE  +  +RGRPL LD  RYD++  LW+ HLV  +V+  R +SRQVII N Y
Sbjct:  207 ALCLVCGEILNAGGKGECTNHAFECGAGAGIFFLLQECIGLIMHGTKAAYVHSPYVDSHGETPQ--YRGRPLNLDLDRYDILHELWSGHLVRQKVIAERGSSRQVIIANFY 315          
BLAST of mRNA_L-elsbetiae_contig10327.367.1 vs. uniprot
Match: A0A7S4MYL2_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MYL2_9STRA)

HSP 1 Score: 135 bits (339), Expect = 3.880e-31
Identity = 70/160 (43.75%), Postives = 97/160 (60.62%), Query Frame = 0
Query:  198 PLKIELVRLPHAYTELHAQVSTSTSXXXXXXXXXXXXXXGPGVDRVGHPAVCLVCGKVLDASGRGACTRHARDCGCGLGLLFLLQECAVLLIHGRRASYFPSPYVDAYGERQRHTFRGRPLFLDQRRYDVVRGLWAKHLVAHEVVQNRSTSRQVIITNHY 357
            P +  +  LP +YT+L+A++                             A+CLVCG+VL+A G+G CT+HA  CG G G+ FLLQEC  L++HG +A+Y  SPYVD++GE  +  +RGRPL LD  RYDV+R +W+ HLV   V+  R++SRQVII N Y
Sbjct:  851 PSRPRIKMLPTSYTDLYAELGALCPDSE-------------------QTALCLVCGQVLNAGGKGECTKHAYKCGGGCGVFFLLQECVSLIMHGVKAAYIHSPYVDSHGETPQ--YRGRPLNLDLDRYDVLREMWSGHLVRERVISERASSRQVIIANFY 989          
BLAST of mRNA_L-elsbetiae_contig10327.367.1 vs. uniprot
Match: A0A7S2UM39_9STRA (E3 ubiquitin-protein ligase n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UM39_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.160e-30
Identity = 71/158 (44.94%), Postives = 97/158 (61.39%), Query Frame = 0
Query:  200 KIELVRLPHAYTELHAQVSTSTSXXXXXXXXXXXXXXGPGVDRVGHPAVCLVCGKVLDASGRGACTRHARDCGCGLGLLFLLQECAVLLIHGRRASYFPSPYVDAYGERQRHTFRGRPLFLDQRRYDVVRGLWAKHLVAHEVVQNRSTSRQVIITNHY 357
            K  +  LP +YT+L+AQ+                   GP        A+CLVCG+VL+A G+G CT+HA  CG G G+ FLLQEC  L++H  +A+Y  SPYVD++GE  +  +RGRPL LD  RYD+++ LW++HLV  +VV  R  +RQVII N Y
Sbjct: 2002 KHRIAMLPTSYTDLYAQL-------------------GPIFPDSEQTALCLVCGEVLNAGGKGECTKHAAACGGGAGIFFLLQECVGLIMHVGKAAYVHSPYVDSHGETPQ--YRGRPLNLDLDRYDILKELWSEHLVREKVVAERGNARQVIIANFY 2138          
BLAST of mRNA_L-elsbetiae_contig10327.367.1 vs. uniprot
Match: A0A7S4S5A1_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S5A1_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.330e-30
Identity = 62/111 (55.86%), Postives = 83/111 (74.77%), Query Frame = 0
Query:  247 AVCLVCGKVLDASGRGACTRHARDCGCGLGLLFLLQECAVLLIHGRRASYFPSPYVDAYGERQRHTFRGRPLFLDQRRYDVVRGLWAKHLVAHEVVQNRSTSRQVIITNHY 357
            A+CLVCG+VL+A G+G CT HA +CG G G+ FLLQEC  L++HG +A+Y  SPYVD++GE  +  +RGRPL LD  RYD+++ LW+ HLV  +V+  R +SRQVII N Y
Sbjct:  951 ALCLVCGEVLNAGGKGECTNHAFECGAGAGIFFLLQECIGLIMHGTKAAYVHSPYVDSHGETPQ--YRGRPLNLDLDRYDILQELWSGHLVRQKVIAERGSSRQVIIANFY 1059          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10327.367.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZR4_9PHAE1.530e-10973.15E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp.... [more]
A0A7S2H0X4_9STRA1.400e-4653.01E3 ubiquitin-protein ligase n=1 Tax=Dictyocha spec... [more]
A0A7S2SNG9_9STRA3.160e-4045.50E3 ubiquitin-protein ligase n=1 Tax=Rhizochromulin... [more]
A0A835YQN3_9STRA2.270e-3940.64E3 ubiquitin-protein ligase n=1 Tax=Tribonema minu... [more]
A0A6S9LH47_HETAK1.070e-3668.00E3 ubiquitin-protein ligase n=1 Tax=Heterosigma ak... [more]
K8YUN0_NANGC9.650e-3562.07E3 ubiquitin-protein ligase n=2 Tax=Nannochloropsi... [more]
A0A7S2ML06_9STRA2.220e-3254.95E3 ubiquitin-protein ligase n=1 Tax=Helicotheca ta... [more]
A0A7S4MYL2_9STRA3.880e-3143.75E3 ubiquitin-protein ligase n=1 Tax=Odontella auri... [more]
A0A7S2UM39_9STRA1.160e-3044.94E3 ubiquitin-protein ligase n=2 Tax=Attheya septen... [more]
A0A7S4S5A1_9STRA1.330e-3055.86E3 ubiquitin-protein ligase n=1 Tax=Ditylum bright... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21497:SF24E3 UBIQUITIN-PROTEIN LIGASE UBR1coord: 119..350
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..357
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
IPR039164E3 ubiquitin-protein ligase UBR1-likePANTHERPTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDcoord: 119..350

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10327contigL-elsbetiae_contig10327:2926..6409 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10327.367.1mRNA_L-elsbetiae_contig10327.367.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10327 1114..6961 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10327.367.1 ID=prot_L-elsbetiae_contig10327.367.1|Name=mRNA_L-elsbetiae_contig10327.367.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=358bp
MVLHQAAAAAAAARAVVVAVATVAVQRWQQQRSVRPASGRPRDRLPAHGS
ADGPRLHGDAVALAPGDNTSTSKTAAAAVAPSPTGAGSADAVEGAGRESA
PGAVRADGAAVALPSADNAFMPLCQFFGFPASAEAVLAEPGLVDAARRWL
ACVADTTASHMARASPLPAAAEQISTGDWVLLGRREAVSRRLFDFPSPLK
IELVRLPHAYTELHAQVSTSTSSNSGANGGEGGAAGGPGVDRVGHPAVCL
VCGKVLDASGRGACTRHARDCGCGLGLLFLLQECAVLLIHGRRASYFPSP
YVDAYGERQRHTFRGRPLFLDQRRYDVVRGLWAKHLVAHEVVQNRSTSRQ
VIITNHY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039164UBR1-like