prot_L-elsbetiae_contig10323.365.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10323.365.1
Unique Nameprot_L-elsbetiae_contig10323.365.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length551
Homology
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BLAST of mRNA_L-elsbetiae_contig10323.365.1 vs. uniprot
Match: A0A6H5KZ31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ31_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 8.040e-13
Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 0 
Query:  307 QQQDMVRMCQHPGCRRAPCYAWEGNKKASFCASHRLPGQVNVVSKR 352
            Q Q++VR+CQH GCRR PCY WEG K+A+FCA+H LPGQVNVVS R
Sbjct:  415 QPQELVRVCQHLGCRRGPCYGWEGEKRATFCAAHGLPGQVNVVSPR 460
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10323.365.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KZ31_9PHAE8.040e-1371.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10323contigL-elsbetiae_contig10323:2549..5730 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10323.365.1mRNA_L-elsbetiae_contig10323.365.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10323 1613..5939 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10323.365.1 ID=prot_L-elsbetiae_contig10323.365.1|Name=mRNA_L-elsbetiae_contig10323.365.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=551bp
MEEGRGAMAATGLSFSSAGKQHVSHGTYGGNGSVSRGRDHQSSTPNPFVD
AEVGAGFVGDSGRRLAGGGAVSGVGGGSHNVRRHSSNRTDATAMASIRGA
GTDLSPRTEEIRSFPAGFAASDVSGMITGMTTARLVGVNASNPIDMFGRA
MNAAAGATAAAPGGKTSMGMVGLANGGAGGVRIGGALPPKGIATEAALRE
GGGGGSGGGGGGGSHVSRGVKAEAGQRGMRHTGGIGWGAKPANGRIDDIL
GDGGGGASKRRKITTAAPASAAPTLLPLPPPKSGGRGKDTPAAPASSTNG
LPSSFSQQQDMVRMCQHPGCRRAPCYAWEGNKKASFCASHRLPGQVNVVS
KRCNHEGCRLGPSYAEPGEKKPRYCAGHRLPGHVNVVSPRCQHEGCSRGP
SYGQGGDARKPIFCAGHRQYGMVNVVSPQCQDPSCSKGPSYGFEGERASF
CAKHKQDGQVNVVSRRCKMEHCRKGPSYGEEGDRRASYCAKHKQDGMVNI
VSRTRKCCTPGCNKYPNFGREGDRKASFCALHRREGDIDLANARFLTRAT
*
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