prot_L-elsbetiae_contig10313.359.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10313.359.1
Unique Nameprot_L-elsbetiae_contig10313.359.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length189
Homology
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Match: D7FXR7_ECTSI (S-adenosyl-methyltransferase MraW n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR7_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 1.590e-33
Identity = 95/196 (48.47%), Postives = 103/196 (52.55%), Query Frame = 0
Query:    1 QAEAGRFQAVRSNFADVGRAVRDCGLLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDDPSPGSLLSADGMVDGILVDLGVSSRQIDDGARGFSFSADGPLDMRMEGGGGGPDVEGRN------PGPKDEEDRAPWNGGVG-GMRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEKR 189
            +AE GRFQAVRSNFA VGRAVR+C L+L                                               P    SA  +VDGILVDLGVSS QIDD ARGFSFSADGPLDMRMEG G G  V  R+         ++ EDRA   GG G G            +SA DVVNFADE EIREMVWRYGDEKR
Sbjct:   62 EAEVGRFQAVRSNFAAVGRAVRECELMLQQPPLAPEASTAPAPAAGV----------------------------PPRTTSAGPLVDGILVDLGVSSHQIDDEARGFSFSADGPLDMRMEGTGDGDSVGERSGFGGVASTSREHEDRAVEKGGRGEGXXXXXXXXXXXXVSAADVVNFADESEIREMVWRYGDEKR 229          
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Match: A0A6H5J8S8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8S8_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 7.020e-33
Identity = 128/221 (57.92%), Postives = 135/221 (61.09%), Query Frame = 0
Query:    1 QAEAGRFQAVRSNFADVGRAVRDCGLLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDDPS-------------------------PGSLLSADGMVDGILVDLGVSSRQIDDGARGFSFSADGPLDMRMEGGGGGPDVEGRN------PGPKDEEDRAPWNGG-VGGMRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEKR 189
            +AEAGRFQAVRSNFADVG+AVR+C LLL              XXXXXXXXXXXXXXXXXXXXXXXXXXXX                              P    SA  +VDGILVDLGVSS QIDDGARGFSFSADGPLDMRMEG G G     R+      P     EDRA   GG  GG       G GG +SA DVVN+ADE EIREMVWRYGDEKR
Sbjct:  438 EAEAGRFQAVRSNFADVGKAVRECELLLQQPPLVPEAESPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRTTSAGPLVDGILVDLGVSSHQIDDGARGFSFSADGPLDMRMEGTGDGDSAGERSWFGGVAPTSTKHEDRAVEKGGRAGGGDXXXXRGSGGGISAADVVNYADESEIREMVWRYGDEKR 658          
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Match: A0A1F3AE72_9PROT (Ribosomal RNA small subunit methyltransferase H n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F3AE72_9PROT)

HSP 1 Score: 69.7 bits (169), Expect = 8.600e-11
Identity = 47/113 (41.59%), Postives = 57/113 (50.44%), Query Frame = 0
Query:   79 LLSADGM--VDGILVDLGVSSRQIDDGARGFSFSADGPLDMRMEGGGGGPDVEGRNPGPKDEEDRAPWNGGVGGMRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEKR 189
            LLSA+G+  VDG+ +DLGVSS Q D   RGFSF  DGPLDMRME                    R P                    SA D+VN ADE E+ ++ WRYG+E+R
Sbjct:   86 LLSAEGVKDVDGVALDLGVSSMQFDRAERGFSFRGDGPLDMRME-------------------KRGP--------------------SAADLVNEADEAELADIFWRYGEERR 159          
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Match: A0A4R3J9J7_9PROT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Varunaivibrio sulfuroxidans TaxID=1773489 RepID=A0A4R3J9J7_9PROT)

HSP 1 Score: 69.7 bits (169), Expect = 9.460e-11
Identity = 44/104 (42.31%), Postives = 57/104 (54.81%), Query Frame = 0
Query:   86 VDGILVDLGVSSRQIDDGARGFSFSADGPLDMRMEGGGGGPDVEGRNPGPKDEEDRAPWNGGVGGMRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEKR 189
            +DG+ +D GVSS Q+D   RGFSF ADGPLDMRM GG  G    G      D  ++AP                    SA DVVN A E E+ +++WRYG+E++
Sbjct:   94 IDGVAMDFGVSSMQLDSPERGFSFRADGPLDMRM-GGASGDVAHG-----DDAHNKAP--------------------SAADVVNTAGEKELADIIWRYGEERQ 171          
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Match: A0A6M2BUK4_9GAMM (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Solimonas terrae TaxID=1396819 RepID=A0A6M2BUK4_9GAMM)

HSP 1 Score: 68.2 bits (165), Expect = 2.600e-10
Identity = 41/105 (39.05%), Postives = 52/105 (49.52%), Query Frame = 0
Query:   84 GMVDGILVDLGVSSRQIDDGARGFSFSADGPLDMRMEGGGGGPDVEGRNPGPKDEEDRAPWNGGVGGMRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEK 188
            G +DG+L+DLGVSS Q+DD  RGFSFS DGPLDMRM               P+  E  A W                        +  A+E EI +++WRYGDE+
Sbjct:   92 GQIDGVLMDLGVSSPQLDDAGRGFSFSKDGPLDMRMN--------------PQAGESAADW------------------------LARAEEAEIADVIWRYGDER 158          
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Match: A0A3M2I4N9_9GAMM (Ribosomal RNA small subunit methyltransferase H n=2 Tax=Lysobacter pythonis TaxID=2483112 RepID=A0A3M2I4N9_9GAMM)

HSP 1 Score: 67.4 bits (163), Expect = 5.770e-10
Identity = 44/112 (39.29%), Postives = 56/112 (50.00%), Query Frame = 0
Query:   77 GSLLSADGMVDGILVDLGVSSRQIDDGARGFSFSADGPLDMRMEGGGGGPDVEGRNPGPKDEEDRAPWNGGVGGMRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEK 188
            G   +ADG+ DG+L DLGVSS Q+D+  RGFSF+ DGPLDMRM+   G              E  A W                        +N ADE EI E++WRYG+E+
Sbjct:   95 GEWAAADGL-DGVLFDLGVSSPQLDEAGRGFSFNKDGPLDMRMDASAG--------------ESAAGW------------------------INRADEREIAEVLWRYGEER 167          
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Match: RSMH_MARN8 (Ribosomal RNA small subunit methyltransferase H n=21 Tax=Marinobacter TaxID=2742 RepID=RSMH_MARN8)

HSP 1 Score: 66.2 bits (160), Expect = 1.480e-9
Identity = 40/103 (38.83%), Postives = 51/103 (49.51%), Query Frame = 0
Query:   86 VDGILVDLGVSSRQIDDGARGFSFSADGPLDMRMEGGGGGPDVEGRNPGPKDEEDRAPWNGGVGGMRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEK 188
            VDG+L+DLGVSS Q+DD +RGFSF  DGPLDMRM               P+ E   A W                        +  ADE EI +++WRYG+E+
Sbjct:  104 VDGVLMDLGVSSPQLDDASRGFSFMRDGPLDMRMN--------------PQQEPSAAQW------------------------LAEADEREIADVIWRYGEER 168          
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Match: A0A512NJZ6_9HYPH (Ribosomal RNA small subunit methyltransferase H n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A512NJZ6_9HYPH)

HSP 1 Score: 65.9 bits (159), Expect = 1.950e-9
Identity = 45/113 (39.82%), Postives = 57/113 (50.44%), Query Frame = 0
Query:   79 LLSADGM--VDGILVDLGVSSRQIDDGARGFSFSADGPLDMRMEGGGGGPDVEGRNPGPKDEEDRAPWNGGVGGMRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEKR 189
            LLSA+G+  VDG+ +DLGVSS Q D   RGFSF A GPLDMRME  G                                        SA D+VN ADE E+ ++++RYG+E+R
Sbjct:   84 LLSAEGVEDVDGVALDLGVSSMQFDQAERGFSFRAFGPLDMRMEKNGS---------------------------------------SAADLVNEADEAELADIIFRYGEERR 157          
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Match: A0A2D5DH54_9SPHN (Ribosomal RNA small subunit methyltransferase H n=3 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A2D5DH54_9SPHN)

HSP 1 Score: 65.1 bits (157), Expect = 3.730e-9
Identity = 44/114 (38.60%), Postives = 61/114 (53.51%), Query Frame = 0
Query:   78 SLLSADGM--VDGILVDLGVSSRQIDDGARGFSFSADGPLDMRMEGGGGGPDVEGRNPGPKDEEDRAPWNGGVGGMRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEKR 189
            S+L+A+G+  VD +++D+GVSS Q+D+ ARGFSF ADGPLDMRM                                     G DG   SA D +N ADE EI ++++ YG+E+R
Sbjct:   85 SILAAEGIEAVDAVVLDIGVSSMQLDEAARGFSFRADGPLDMRM-------------------------------------GQDG--PSAADFLNEADEEEIADVIYLYGEERR 159          
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Match: UPI000E6AE035 (16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH n=1 Tax=Indioceanicola profundi TaxID=2220096 RepID=UPI000E6AE035)

HSP 1 Score: 65.1 bits (157), Expect = 3.820e-9
Identity = 42/103 (40.78%), Postives = 52/103 (50.49%), Query Frame = 0
Query:   86 VDGILVDLGVSSRQIDDGARGFSFSADGPLDMRMEGGGGGPDVEGRNPGPKDEEDRAPWNGGVGGMRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEK 188
            VDG+ +DLGVSS QID+  RGFSF  DGPLDMRM                                     G DG   SA DVVN A+E E+ +++WRYG+E+
Sbjct:   95 VDGVALDLGVSSPQIDEPERGFSFRFDGPLDMRM-------------------------------------GQDG--PSAADVVNTAEEAELADIIWRYGEER 158          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10313.359.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXR7_ECTSI1.590e-3348.47S-adenosyl-methyltransferase MraW n=1 Tax=Ectocarp... [more]
A0A6H5J8S8_9PHAE7.020e-3357.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1F3AE72_9PROT8.600e-1141.59Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A4R3J9J7_9PROT9.460e-1142.31Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A6M2BUK4_9GAMM2.600e-1039.05Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A3M2I4N9_9GAMM5.770e-1039.29Ribosomal RNA small subunit methyltransferase H n=... [more]
RSMH_MARN81.480e-938.83Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A512NJZ6_9HYPH1.950e-939.82Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A2D5DH54_9SPHN3.730e-938.60Ribosomal RNA small subunit methyltransferase H n=... [more]
UPI000E6AE0353.820e-940.7816S rRNA (cytosine(1402)-N(4))-methyltransferase R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002903Ribosomal RNA small subunit methyltransferase HPFAMPF01795Methyltransf_5coord: 85..120
e-value: 1.5E-13
score: 51.0
IPR002903Ribosomal RNA small subunit methyltransferase HPANTHERPTHR11265S-ADENOSYL-METHYLTRANSFERASE MRAWcoord: 83..188
IPR023397S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamilySUPERFAMILY81799Putative methyltransferase TM0872, insert domaincoord: 105..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10313contigL-elsbetiae_contig10313:3931..6523 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10313.359.1mRNA_L-elsbetiae_contig10313.359.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10313 3931..6523 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10313.359.1 ID=prot_L-elsbetiae_contig10313.359.1|Name=mRNA_L-elsbetiae_contig10313.359.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=189bp
QAEAGRFQAVRSNFADVGRAVRDCGLLLPPKTSPPPPPPPPPLGAAAAPA
AVAAVAAAAPAAAAAATSSSPDDPSPGSLLSADGMVDGILVDLGVSSRQI
DDGARGFSFSADGPLDMRMEGGGGGPDVEGRNPGPKDEEDRAPWNGGVGG
MRGRESGGDGGALSAFDVVNFADEMEIREMVWRYGDEKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002903RsmH
IPR023397SAM-dep_MeTrfase_MraW_recog