prot_L-elsbetiae_contig1030.348.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1030.348.1
Unique Nameprot_L-elsbetiae_contig1030.348.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1273
Homology
BLAST of mRNA_L-elsbetiae_contig1030.348.1 vs. uniprot
Match: D7FYY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY5_ECTSI)

HSP 1 Score: 840 bits (2170), Expect = 1.210e-282
Identity = 693/1182 (58.63%), Postives = 753/1182 (63.71%), Query Frame = 0
Query:  128 VDGEASKPAASVVAP-----KQEQKGDAKENALREALILADGPNKILREVERIPALRRLSDSALRVTSATPADGRLAALALYRLGAEARAAESASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSXXXXXXXXXXXXXXXXAAEPAAVDHS--TKAGQLQARD-RVGHDAAASASAXXXXXXAGLAAPEGEQTHGSVPGSEETERPEEGDAGDSATAEAADDSTAALSSKERGVGKGGAEREXXXXXXXXXXXX-----AVPVAFDMEHVKSDQRFEQLVEIVECVAEELSVSDISKASHRRGRGEQRGVVWGLSILGHVPRNSLLESLAGLLTGRFRLESG-GAREGAAEXXXXXXXXXXXXXXXXXXXERGAD------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVVSKAVEAKADGIGTP-------ATSGTDLATAALSFAYAHARLDISTGELLEVIAACATPQLKSTPLRDLANLSWAFAVQRHLDPRMMKGVSREIVSDRAVGRMSAKDASIFAWAYGMLGLRPDRVIQALTREGLATVGEATPHDLSNLAWGLARAGLAEGGGDDFEDEGEGDGEAKPGGEEGRGVGEEARMQEEDDVRSRGRGRDAGGRXXXXXXEGL--WRLGWMRGKQRGRRWRRDHEHQAEGEEEEGXXXXXXXXEQEGGFLGVEVSTTSGGAADGGIGPAADLVDPAPPGRDAEVS-----FQPKQLSRLCWALGAWDAQGVASLLPEAGLFAARALSEAGQRPKEMQSPPVGQVLWAFATLVGNADSPAQELAGLVGALAEGFESEGAGGA--LGXXXXXXXXXXXXGLDAATACDVLWSFATMGHPAHSLCEAMARDLVDKVPKLHPSSVSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYTVSLKRQFYVTKEDLESLSPSASANLLWGLAKTEAAFAESFDRECLGAVAADMGPKLLSFSPRELCRTAWALGRLGLGGIFGPGSVVDGGXXXXXESEDGGYGSALDGG-EMSGLMDKLLRECSKWLEIFTPQDLETLLWAICRLEHRADELVAEMAKEGKRRQEELQSLLQQSGPSAARDAAFHLGAFRHLLAKYRSIDFDGLRAKGRYRRGKSMLSRMFRER 1272
             DG   KPAA+         KQE KGDAKE ALREAL+ ADGP+KILRE ERIPALRRLSDSALRVTSATP+DGRLAALALYRLGA ARAAESA                                   XXXXXXXXX     XXXXXXXXXXXX   AA   + D S  T    L A   R G +             AG  A  G  T   VPG +     E G AG+S   +   D   A S      G GG E E                 A   AFDME V+SDQRFEQLVEI+ECV+++LSVSD SK            VVWGLSILGHVPRNSLLESLA  LT R R E+   A      XXXXXXXXXXXXXXXXX  E GA+      A                                            XXXXXX    ++AV+    G  +P        TSGTDLATAALSFAYAHARLDISTGELLEVIAACATPQL + PLRDLANLSWAFAVQ  L P MM GV REIVS RA GRM+AKDASI AWAYGMLGLRP RVI+ALTREGLATV EATPHDLSNLAWGLA+AG                                                     XXXXXX     W LGW++      RW R    + +GEEE+          +EG   G E S+         +   ADLV     GR  + +     FQP+QLSRLCWALGAW  +G   LL    +FAAR+LSEAGQ PKE  +  + QVLWAFATLVG ADSPA ELAGLVGALAEGFE+EGA G     XXXX        GLDAATACDVLWSFATMGHPAHSLCEAMARDLV+KVP+L PSSVS LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYTVSLKRQF VTK+DL SLSPSASANLLWGL KTEAAFA+ FDRECL AVAADMGPKLLSFSPRELCRTAWALGRLGLGG+   G   DGG     +S+D G   A+DGG E+SGLMDKLL ECSKW+E+FTPQ+LETLLWA+CRLEHRAD+LVA+MA EGKRRQEEL SLL+QSGPSAARDAAFHLGAFRHLLAKYR +DFDG RA+GRYRRGKSM+SRMFRER
Sbjct:   59 TDGATVKPAAAXXXXXXXXVKQEPKGDAKEKALREALLSADGPSKILREAERIPALRRLSDSALRVTSATPSDGRLAALALYRLGAAARAAESAPSSGLASTAASAVEGSVAADGERSAVGPSKTGGEGXXXXXXXXXERPERXXXXXXXXXXXXERPAAATESGDQSSTTPTATLSAATARQGGE-----PFNNEQGQAGTGAATG--TGIEVPGVKGDTPEEAGAAGESVKTK---DPALAGSVPRSSEGGGGVEEEVGTPAAAASVGSSPNKGATTAAFDMEEVRSDQRFEQLVEIIECVSKDLSVSDTSK------------VVWGLSILGHVPRNSLLESLATFLTDRLRQEAATAAXXXXXXXXXXXXXXXXXXXXXXXEGEGGANGQKVTVAGGAEDGISSPSSSDSPQEGGLGSGSGKPAEGHDDGQLSGIEGGNXXXXXXXXXXAEAVDKATTGAASPKKRDAVACTSGTDLATAALSFAYAHARLDISTGELLEVIAACATPQLAAMPLRDLANLSWAFAVQHRLHPEMMAGVGREIVSSRASGRMAAKDASILAWAYGMLGLRPARVIEALTREGLATVQEATPHDLSNLAWGLAKAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGLGWVKS-----RWERGSGPEGDGEEEQ--EDCGEGLSEEGSGSG-EASSDPADIHATSVETLADLVSRREGGRGFDGAESFQHFQPRQLSRLCWALGAWHGRGSVKLLGS-DIFAARSLSEAGQHPKEYTAEELAQVLWAFATLVGKADSPAHELAGLVGALAEGFETEGARGMGXXXXXXXVSAAGREGGLDAATACDVLWSFATMGHPAHSLCEAMARDLVNKVPELPPSSVSQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYTVSLKRQFDVTKDDLTSLSPSASANLLWGLVKTEAAFADGFDRECLEAVAADMGPKLLSFSPRELCRTAWALGRLGLGGVLFGGPATDGGGG---DSDDDG--PAVDGGCELSGLMDKLLGECSKWIEMFTPQELETLLWAVCRLEHRADDLVADMAAEGKRRQEELPSLLKQSGPSAARDAAFHLGAFRHLLAKYRGVDFDGRRARGRYRRGKSMISRMFRER 1204          
BLAST of mRNA_L-elsbetiae_contig1030.348.1 vs. uniprot
Match: A0A6H5JR07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR07_9PHAE)

HSP 1 Score: 741 bits (1913), Expect = 6.530e-246
Identity = 574/1170 (49.06%), Postives = 636/1170 (54.36%), Query Frame = 0
Query:  167 KILREVERIPALRRLSDSALRVTSATPADGRLAALALYRLGAEARAAESASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSXXXXXXXXXXXXXXXXAAEPAAVDHSTKAGQLQARDRVGHDAAASASAXXXXXXAG-LAAPEGEQTHGS-------VPGSEETERPEEGDAGDSATAEAADDSTAALSSKERGVGKGGAER--EXXXXXXXXXXXXAVPVAFDMEHVKSDQRFEQLVEIVECVAEELSVSDISKASHRRGRGEQRGVVWGLSILGHVPRNSLLESLAGLLTGRFRLESGGAREGAAEXXXXXXXXXXXXXXXXXXXERGADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------EVVVSKAVEAKADGIGTPATSGTDLATAALSFAYAHARLDISTGELLEVIAACATPQLKSTPLRDLANLSWAFAVQRHLDPRMMKGVSREIVSDRAVGRMSAKDASIFAWAYGMLGLRPDRVIQALTREGLATVGEATPHDLSNLAWGLARAGLAEGGGDDFEDEGEGDGEAKPGGEEGRGVGEEARMQEEDDVRSRGRGRDAGGRXXXXXXEGLWRLGWMRGKQRGRRWRRDHEHQAEGEEEEGXXXXXXXXEQEGGFLGVEVSTTSGGAADGGIGPAADLVDPAPPGRDAEVS-------------------FQPKQLSRLCWALGAWDAQGVASLLPEAGLFAARALSEAGQRPKEMQSPPVGQ-------------VLWAFATLVGNADSPAQELAGLVGALAEGFESEGAGG--ALGXXXXXXXXXXXXGLDAATACDVLWSFATMGHPAHSLCEAMARDLVDKVPK-LHPSSVSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYTVSLKRQFYVTKEDLESLSPSASANLLWGLAKTEAAFAESFDRECLGAVAADMGPKLLSFSPRELCRTAWALGRLGLGGIFGPGSVVDGGXXXXXESEDGGYGSALDGG-EMSGLMDKLLRECSKWLEIFTPQDLETLLWAICRLEHRADELVAEMAKEGKRRQEELQSLLQQSGPSAARDAAFHLGAFRHLLAKYRSIDFDGLRAKGRYRRGKSMLSRMFRER 1272
            +ILREVERIPALRRLSDSALRVTSATP+DGRLAALALYRLGA ARAAESA                                               +                  E    +    A   ++RD+      A+ SA             +G+   G+       VPG    +  E G AG+S   +   D+  A        G GG E                    AFDME V+SDQRFEQLVEI+ECVA++LSV                  VWGLSILGHVPRNSLLESLA  LT R R E   A      XXXXXXXXXXXXXXXXXX E GAD                                                                     +     A   K D +    TSGTDLATAALSFAYAHARLDISTGELLEVIAACATPQL + PLRDLANLSWAFAVQR L P MM GV REIVS RA G M+AKDASI AWAYGMLGLRP RVI+ALTREGLATV EATPHDLSNLAWGLA+AG    GG         D  A    E+        +  +                XXXXXX                           GEE E         E+               A    +   ADLV   P G+  E S                   FQP+QLSRLCWALGAW+ +G   L P + +F AR+LSEAGQ PKE  +  + Q             VLWAFATLVG ADSPAQELAGLVGALAEGFE+EGA G    GXXXX        GLDAATACDVLWSFAT+GHPAHSLCEAMARDL+  V + L   +V                                               GYTVSLKRQF +TK+DL SLSPSASANLLWGL KTEAAFA+ FDRECL AVAADMGPKLLSFSPRELCRTAWALGRLGLGG+F  G   DGG     +S+D G   A+DGG E+SGLMDKLL ECSKW+E+FTPQ+LETLLWA+CRLEHRAD+LVA+MA EGKRRQEEL SLL+QSGPSAARDAAFHLGAFRHLLAKYR +DFDG RA+GRYRRGKSM+SRMFRER
Sbjct:    9 RILREVERIPALRRLSDSALRVTSATPSDGRLAALALYRLGAAARAAESAPSSGLASTAASAVEGSVAADGER-----------------------AAVGPSKAGGRGKRGAVERPESGGAEAEKPAAATESRDQSSTAPTATLSAATVRQGGDPFNNEQGQADTGATTGTGIEVPGVMGDDPQEPGAAGESVKTK---DAALAGGVPRSPEGAGGVEEFGAPAAAVGSSPHKGTTTAAFDMEEVRSDQRFEQLVEIIECVAKDLSV------------------VWGLSILGHVPRNSLLESLATFLTDRLRQE---AXXXXXXXXXXXXXXXXXXXXXXXXDEHGADGGKAAVGGSTEDGISSPSTGDSLQEGGLGSGSGKPAEGLNRGQLSGIEGDNAGGXXXXXXXXXXXEGVDKATTGAASAKKQDAVAC--TSGTDLATAALSFAYAHARLDISTGELLEVIAACATPQLAAMPLRDLANLSWAFAVQRRLHPEMMAGVGREIVSSRAFGHMAAKDASILAWAYGMLGLRPSRVIEALTREGLATVQEATPHDLSNLAWGLAKAGA---GGXXXXXXXVEDPVASAASEDSGSGXXAGKXAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEEVEQEDCGEGLSEEGXXXXXXXXXXXXXNATS--VETLADLV---PGGKKEEASMEQRLGEAVLARATDSFQHFQPRQLSRLCWALGAWNGRGSVKL-PGSDVFVARSLSEAGQHPKEYTAEELAQARRQRRRGGGVVRVLWAFATLVGKADSPAQELAGLVGALAEGFETEGARGMGGGGXXXXVSAAGREGGLDAATACDVLWSFATLGHPAHSLCEAMARDLLSVVERRLDEFTVEEAASALWALGAL----------------------------------GYTVSLKRQFDLTKDDLTSLSPSASANLLWGLVKTEAAFADGFDRECLEAVAADMGPKLLSFSPRELCRTAWALGRLGLGGVFFGGPATDGGGG---DSDDDG--PAVDGGCELSGLMDKLLGECSKWIEMFTPQELETLLWAVCRLEHRADDLVADMAAEGKRRQEELPSLLKQSGPSAARDAAFHLGAFRHLLAKYRGVDFDGRRARGRYRRGKSMISRMFRER 1081          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1030.348.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYY5_ECTSI1.210e-28258.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JR07_9PHAE6.530e-24649.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1015..1035
NoneNo IPR availablePANTHERPTHR21228FAST LEU-RICH DOMAIN-CONTAININGcoord: 561..684
coord: 756..1216
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..1272
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1030contigL-elsbetiae_contig1030:14657..27182 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1030.348.1mRNA_L-elsbetiae_contig1030.348.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1030 14657..27202 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1030.348.1 ID=prot_L-elsbetiae_contig1030.348.1|Name=mRNA_L-elsbetiae_contig1030.348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1273bp
MKPPVMIALICTSVRNVSSGARSTTTVEGLYWKSSTFAATAVAGRARTAT
RASAAAAAALSSSRSFAVRELRGGGSGGVGGGEADQLGTSRSRDGNPASQ
QRGGDVGGRMGSTGEKAAEHSSKGGLGVDGEASKPAASVVAPKQEQKGDA
KENALREALILADGPNKILREVERIPALRRLSDSALRVTSATPADGRLAA
LALYRLGAEARAAESASTTAAAAAAAAAAAAAAAAAAAEKTSSSSQVESG
GEPAGEPGGGGSVSPALADGGGGAAAPATTAAEPAAVDHSTKAGQLQARD
RVGHDAAASASAATTAAAAGLAAPEGEQTHGSVPGSEETERPEEGDAGDS
ATAEAADDSTAALSSKERGVGKGGAEREEAAAVEAAAAAAAVPVAFDMEH
VKSDQRFEQLVEIVECVAEELSVSDISKASHRRGRGEQRGVVWGLSILGH
VPRNSLLESLAGLLTGRFRLESGGAREGAAESGGGGGGGGGGGGGGGGGG
ERGADAGGAMAASSEAGGGGRGSADARAAGGDGVPGAGALAGGDRAGGAE
GGGGAGEVVVSKAVEAKADGIGTPATSGTDLATAALSFAYAHARLDISTG
ELLEVIAACATPQLKSTPLRDLANLSWAFAVQRHLDPRMMKGVSREIVSD
RAVGRMSAKDASIFAWAYGMLGLRPDRVIQALTREGLATVGEATPHDLSN
LAWGLARAGLAEGGGDDFEDEGEGDGEAKPGGEEGRGVGEEARMQEEDDV
RSRGRGRDAGGRGGRGGGEGLWRLGWMRGKQRGRRWRRDHEHQAEGEEEE
GAEGEEEEGEQEGGFLGVEVSTTSGGAADGGIGPAADLVDPAPPGRDAEV
SFQPKQLSRLCWALGAWDAQGVASLLPEAGLFAARALSEAGQRPKEMQSP
PVGQVLWAFATLVGNADSPAQELAGLVGALAEGFESEGAGGALGGGGSGG
GGGRGGGLDAATACDVLWSFATMGHPAHSLCEAMARDLVDKVPKLHPSSV
SSLVWAYAKMGHPSAELLERVLSVVERRLDEFSVEEASSALWALGALGYT
VSLKRQFYVTKEDLESLSPSASANLLWGLAKTEAAFAESFDRECLGAVAA
DMGPKLLSFSPRELCRTAWALGRLGLGGIFGPGSVVDGGGGGGGESEDGG
YGSALDGGEMSGLMDKLLRECSKWLEIFTPQDLETLLWAICRLEHRADEL
VAEMAKEGKRRQEELQSLLQQSGPSAARDAAFHLGAFRHLLAKYRSIDFD
GLRAKGRYRRGKSMLSRMFRER*
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