prot_L-elsbetiae_contig103.343.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig103.343.1
Unique Nameprot_L-elsbetiae_contig103.343.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length92
Homology
BLAST of mRNA_L-elsbetiae_contig103.343.1 vs. uniprot
Match: D8LBJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBJ4_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 7.070e-49
Identity = 75/85 (88.24%), Postives = 79/85 (92.94%), Query Frame = 0
Query:    1 MGITAMAVGGTFGVLAKGTVNRLMKVGLRRAPWEYVLGAGIGAYVGNKIPQWEAAMVEDINEMRADRNMPPATRVGGYVFGSSIT 85
            MGITAM VGG FG++AKGTVNRLMKV LRRAPWEYVLGAGIGAYVGNKIPQWEA ++ DINEMRADRNMPPATRVGGY FGSSIT
Sbjct:    1 MGITAMTVGGAFGIVAKGTVNRLMKVSLRRAPWEYVLGAGIGAYVGNKIPQWEATLISDINEMRADRNMPPATRVGGYEFGSSIT 85          
BLAST of mRNA_L-elsbetiae_contig103.343.1 vs. uniprot
Match: A0A6H5JVS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS4_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 2.210e-26
Identity = 49/58 (84.48%), Postives = 53/58 (91.38%), Query Frame = 0
Query:   28 LRRAPWEYVLGAGIGAYVGNKIPQWEAAMVEDINEMRADRNMPPATRVGGYVFGSSIT 85
            L  APWEYVLGAG+GAY+GNKIPQWEA ++ DINEMRADRNMPPATRVGGY FGSSIT
Sbjct:  587 LSPAPWEYVLGAGVGAYIGNKIPQWEATLISDINEMRADRNMPPATRVGGYEFGSSIT 644          
BLAST of mRNA_L-elsbetiae_contig103.343.1 vs. uniprot
Match: A0A7S2V622_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V622_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.150e-15
Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = 0
Query:    1 MGITAMAVGGTF-----GVLAKGTVNRLMKVGLRRAPWEYVLGAGIGAYVGNKIPQWEAAMVEDINEMRADRNMPPATRVGGYVFGSSI 84
            M IT+     TF     GV  K   N +MKV LRR PWEY++   +GAYVG K+P+W+  ++++INEM  +R +PP    G +  GS  
Sbjct:    1 MAITSSVAISTFYHFGWGVALKAMTNSVMKVPLRREPWEYLMFGALGAYVGYKMPEWQQNLIDNINEMHEERGLPPLDVDGQFSLGSKF 89          
BLAST of mRNA_L-elsbetiae_contig103.343.1 vs. uniprot
Match: A0A7R9ZF43_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZF43_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.300e-11
Identity = 34/78 (43.59%), Postives = 43/78 (55.13%), Query Frame = 0
Query:    1 MGITAMAVGGTFGVLAKGTVNRLMKVGLRRAPWEYVLGAGIGAYVGNKIPQWEAAMVEDINEMRADRNMPPATRVGGY 78
            MG+TAM VGG  G       N   KV L R+PW +V    +G Y G K    EA ++ DINE+RAD+ +PP     GY
Sbjct:   28 MGLTAMLVGGVSGTSMHLLANAARKVPLSRSPWFHVAYFFVGMYAGQKYVTVEAKLLNDINELRADKGLPPMVGTPGY 105          
BLAST of mRNA_L-elsbetiae_contig103.343.1 vs. uniprot
Match: A0A6V1ZZJ3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V1ZZJ3_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 9.700e-10
Identity = 30/71 (42.25%), Postives = 43/71 (60.56%), Query Frame = 0
Query:    1 MGITAMAVGGTFGVLAKGTVNRLMKVGLRRAPWEYVLGAGIGAYVGNKIPQWEAAMVEDINEMRADRNMPP 71
            MG+ A  VGGT G   +   N +MK+   R PW +V    +GAY  +K  Q E  +V++INE+R+D+ MPP
Sbjct:   18 MGLVATLVGGTLGTSVQLVTNGVMKIPYSRKPWLHVTYFFLGAYGAHKYLQVEQRLVDEINEIRSDKGMPP 88          
BLAST of mRNA_L-elsbetiae_contig103.343.1 vs. uniprot
Match: A0A7S2BG82_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BG82_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.410e-7
Identity = 31/81 (38.27%), Postives = 48/81 (59.26%), Query Frame = 0
Query:    1 MGITAMAVGGTFGVLAKGTVNRLMKVGLRRAPWEYVLGAGIGAYVGNKIPQWEAAMVEDINEMRADRNMPPATRVGGYVFG 81
            MG+ +  VG  FG   +   N + ++ L R P+ +V  A +G YVG + P+ EAA+ +DI E+R ++N+    RVGG  FG
Sbjct:   27 MGLLSTMVGMGFGFGLQTYSNAIRRLPLAREPYLHVGFALMGGYVGYQYPKVEAALYQDIVEIRKEKNLSSPERVGGNTFG 107          
BLAST of mRNA_L-elsbetiae_contig103.343.1 vs. uniprot
Match: K0R0Q8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R0Q8_THAOC)

HSP 1 Score: 55.1 bits (131), Expect = 5.330e-7
Identity = 31/71 (43.66%), Postives = 40/71 (56.34%), Query Frame = 0
Query:    1 MGITAMAVGGTFGVLAKGTVNRLMKVGLRRAPWEYVLGAGIGAYVGNKIPQWEAAMVEDINEMRADRNMPP 71
            MG+TA  VG   G       N + KV L R PW +V    +G YVG +  + E  +V DINE+RAD+ MPP
Sbjct:  136 MGLTAFFVGAFSGTGMHMMSNAIQKVPLSRRPWMHVGCFFLGGYVGQRWVRLEKELVLDINEIRADKGMPP 206          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig103.343.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LBJ4_ECTSI7.070e-4988.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVS4_9PHAE2.210e-2684.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2V622_9STRA1.150e-1541.57Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9ZF43_9STRA2.300e-1143.59Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A6V1ZZJ3_9STRA9.700e-1042.25Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2BG82_9STRA1.410e-738.27Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
K0R0Q8_THAOC5.330e-743.66Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig103contigL-elsbetiae_contig103:9155..12623 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig103.343.1mRNA_L-elsbetiae_contig103.343.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig103 9155..12623 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig103.343.1 ID=prot_L-elsbetiae_contig103.343.1|Name=mRNA_L-elsbetiae_contig103.343.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=92bp
MGITAMAVGGTFGVLAKGTVNRLMKVGLRRAPWEYVLGAGIGAYVGNKIP
QWEAAMVEDINEMRADRNMPPATRVGGYVFGSSITGGSKTD*
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