prot_L-elsbetiae_contig10221.268.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10221.268.1
Unique Nameprot_L-elsbetiae_contig10221.268.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length208
Homology
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BLAST of mRNA_L-elsbetiae_contig10221.268.1 vs. uniprot
Match: A0A6H5JV35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV35_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 1.700e-33
Identity = 101/213 (47.42%), Postives = 112/213 (52.58%), Query Frame = 0 
Query:    1 VGSPLISKRVQKFIAEPAATLTASISVICSPLAEWHDPGRGFTTRVACSTGELAAAVDA----ASSGVXXXXXXXXXXXXVSNAVERAQTREIAAAAAA-PAAENEGEALSVSSLALASPPGIVAARSDGAVDCCAPCPPPSQRYRDGDGGTDGGGTRSRPRREGHNAAGVGDGXXXXXXXXXXXXXXXXXXXXXXXRKQPLTEPFVAWCVSR 208
            VGSPLISKRVQKFI+EPAATLTA +SVICSPLA WHDPGRGFTTR+ACST +LAAAVDA    +SSG             VSNAVERAQTR IA AA A P  +  G      S +L+ PP                 PP   +    DG            REG    G  DG                       ++QPLTEPFVAWCVSR
Sbjct:  951 VGSPLISKRVQKFISEPAATLTAPVSVICSPLAAWHDPGRGFTTRLACSTRDLAAAVDAGKGVSSSGGAIGGSELLALVDVSNAVERAQTRAIACAAVAGPVGDEAG------SSSLSRPPSS---------------PPRVAKRVAADG------------REGSEGRGCYDGVNDTSEGGRGPPAQQQ-------QQQPLTEPFVAWCVSR 1123
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BLAST of mRNA_L-elsbetiae_contig10221.268.1 vs. uniprot
Match: D8LMF2_ECTSI (Similar to Isochorismate Synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF2_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 6.150e-33
Identity = 116/216 (53.70%), Postives = 127/216 (58.80%), Query Frame = 0 
Query:    1 VGSPLISKRVQKFIAEPAATLTASISVICSPLAEWHDPGRGFTTRVACSTGELAAAVDA--ASSGVXXXXXXXXXXXXVSNAVERAQTREIAAAAAAPAAENEGEALSVSSLALASPP----GIVAARSDGAV--DCCAPCPPPSQRYRDGDGGTDGGGTRSRPRREGHNAAGVGDGXXXXXXXXXXXXXXXXXXXXXXXRKQPLTEPFVAWCVSR 208
            VGSPL SKRVQKFI+EPAATLTA +SVICSPL  WHDPGRGFTTR+A ST +LAAAVDA  +SSGV            VSNAVERAQTR IA AAA P  +  G   S  S   +SPP    G+ A   +G+   DC            DG   T  GG R  P  + H                  XXXXXXXXXXXXX  QPLTEPFVAWCVSR
Sbjct: 1223 VGSPLTSKRVQKFISEPAATLTAPVSVICSPLVAWHDPGRGFTTRLASSTRDLAAAVDAGVSSSGVAIGGSELLALVDVSNAVERAQTRAIACAAAGPIEDEAGS--SSLSRQPSSPPRVAKGVAAGGGEGSEGGDCY-----------DGVNDTSEGGRR--PPAQQH------------------XXXXXXXXXXXXXXPQPLTEPFVAWCVSR 1405
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10221.268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JV35_9PHAE1.700e-3347.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMF2_ECTSI6.150e-3353.70Similar to Isochorismate Synthase n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1220coord: 1..96
e-value: 1.9E-5
score: 26.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10221contigL-elsbetiae_contig10221:798..2105 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10221.268.1mRNA_L-elsbetiae_contig10221.268.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10221 797..2105 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10221.268.1 ID=prot_L-elsbetiae_contig10221.268.1|Name=mRNA_L-elsbetiae_contig10221.268.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=208bp
VGSPLISKRVQKFIAEPAATLTASISVICSPLAEWHDPGRGFTTRVACST
GELAAAVDAASSGVACAGSELLALVDVSNAVERAQTREIAAAAAAPAAEN
EGEALSVSSLALASPPGIVAARSDGAVDCCAPCPPPSQRYRDGDGGTDGG
GTRSRPRREGHNAAGVGDGGGGEECCGADNGASQQTTPQQQKRKQPLTEP
FVAWCVSR
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