prot_L-elsbetiae_contig1021.259.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1021.259.1
Unique Nameprot_L-elsbetiae_contig1021.259.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length524
Homology
BLAST of mRNA_L-elsbetiae_contig1021.259.1 vs. uniprot
Match: D7FM87_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM87_ECTSI)

HSP 1 Score: 379 bits (974), Expect = 2.250e-123
Identity = 305/528 (57.77%), Postives = 334/528 (63.26%), Query Frame = 0
Query:    6 DIDPLDAYMDSIAGEITQQAVEVPSPSPXXXXXTSSFPQLASPSPAQRAIADKVSASPFCDILTSVQRGAGDTSWEHRTGSVAASQPSRAGGSXXXXXXXGEANRPXXXXXXXEACLCLLLGHPAEFLSRFGHILSPGDLESLLPSQDPVVALHIARLRTLMASQXXXXXXXXXXXXXXXXXXXXXXXPASLSADEDVDMPSAPTTTAAVGRETGAXXXXXXXXXXXXXXXXXARVRNRRYRRLKQLAEGGTWFSDEAMKERDPWLWFEYVGKRAGEEKPAPKQAVEQVPGSTSVGTYLQESLGFLSQPQASGGWDTGAAQAGESRGGVG-------SSLGMAFLSGVCADAGIPHVRAGATVDLSHVPAAPSTGAVASPGPPNVSSSGVSAGHGRSPDAHDEMDTSTAAVTAAVGAFGIGDRENGIGSGARRVRFVDERGEDSDGGEGRGERVDDNSDLMQEXXXXXXVGA----GREEVARILSERFLAGLEEGVNYKNVDEDERLDDLEQLSRDEQDRWFRGEED 522
            DIDPLDAYMDS+A E+TQQA +     P         P    PSPAQ  +ADKV+ASPFC++L               T S A +                            EACL LLL  P EFLSRFGHIL+PGDLESLLPSQDP VALH+ARL+TLM SQXXXXXXXXXXXXXXXXXXXXXXX                            XXXXXXXXXXXXXXXXXARVRNRRYRRL+QLAEGG WFSDEAMKERDPWLWFEYVGK AGEEKPAPKQAVE+VPGSTSVGTYLQESLGFLSQ Q +GGW TG   +G   G          +SLGMAFLSGVCADAG   V AG TVD S VP A S+ A  +  P    +SG+  G  R     D++D   AAVTAAVGA G+ D         RRVRF DE G D  GG                XXXXXX       GREEVARILSERFLAGLE+GV+Y++VD DERLDDL+QLSRDEQDRWF GEE+
Sbjct:   13 DIDPLDAYMDSLADEVTQQAEDDTVQPPPWS------PSSQQPSPAQLEVADKVAASPFCNVLPPAT-----------TSSSAEAA---------------------------EACLKLLLHQPGEFLSRFGHILTPGDLESLLPSQDPAVALHVARLKTLMLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXARVRNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGKHAGEEKPAPKQAVEEVPGSTSVGTYLQESLGFLSQKQPNGGWPTGLPTSGAGAGXXXXXXXXXXTSLGMAFLSGVCADAGARDVAAGETVDSSDVPEAASSQAEVTAVP---IASGMPDGRERHA-CEDDVDARAAAVTAAVGAIGLQDDGKKADVDGRRVRFSDEMGSDGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGREEVARILSERFLAGLEQGVDYRSVDGDERLDDLDQLSRDEQDRWFLGEEE 485          
BLAST of mRNA_L-elsbetiae_contig1021.259.1 vs. uniprot
Match: F2TWH5_SALR5 (DUF2052 domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TWH5_SALR5)

HSP 1 Score: 58.2 bits (139), Expect = 1.250e-5
Identity = 25/38 (65.79%), Postives = 34/38 (89.47%), Query Frame = 0
Query:  241 VRNRRYRRLKQLAEGGTWFSDEAMKERDPWLWFEYVGK 278
            VRNRRYRR++QL + GT+FS+EAMKER PWL+ ++VG+
Sbjct:   91 VRNRRYRRMQQLLQEGTFFSEEAMKERCPWLYDQFVGR 128          
BLAST of mRNA_L-elsbetiae_contig1021.259.1 vs. uniprot
Match: UPI0010A83CD4 (coiled-coil domain-containing protein 97 isoform X2 n=4 Tax=Monotremata TaxID=9255 RepID=UPI0010A83CD4)

HSP 1 Score: 55.5 bits (132), Expect = 7.940e-5
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0
Query:  240 RVRNRRYRRLKQLAEGGTWFSDEAMKERDPWLWFEYVGKRAGEEKPAP 287
            R+RN+RY  L+QL +GG +FSDE M+ RDP L+ +Y+G+   EE  AP
Sbjct:   86 RLRNKRYAALRQLIQGGEYFSDEEMRARDPLLYEQYIGQYLSEEDQAP 133          
BLAST of mRNA_L-elsbetiae_contig1021.259.1 vs. uniprot
Match: A0A7L0H3Y7_HERCA (CCD97 protein (Fragment) n=1 Tax=Herpetotheres cachinnans TaxID=56343 RepID=A0A7L0H3Y7_HERCA)

HSP 1 Score: 52.8 bits (125), Expect = 9.230e-5
Identity = 29/75 (38.67%), Postives = 42/75 (56.00%), Query Frame = 0
Query:  240 RVRNRRYRRLKQLAEGGTWFSDEAMKERDPWLWFEYVGKRAGEEK------PAPKQAVEQVPGSTSVGTYLQESL 308
            R+RNRRY  L+QL +GG +FS+E M+ R+P L+  Y+G+  G E        AP   +   PG  S+   L  S+
Sbjct:   52 RLRNRRYAALRQLIQGGEYFSEEEMRAREPLLYQHYIGQYRGSEALPGDPPAAPPHLLGTPPGPQSLAGLLLRSV 126          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1021.259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FM87_ECTSI2.250e-12357.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F2TWH5_SALR51.250e-565.79DUF2052 domain-containing protein n=1 Tax=Salpingo... [more]
UPI0010A83CD47.940e-552.08coiled-coil domain-containing protein 97 isoform X... [more]
A0A7L0H3Y7_HERCA9.230e-538.67CCD97 protein (Fragment) n=1 Tax=Herpetotheres cac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 160..187
NoneNo IPR availableCOILSCoilCoilcoord: 495..515
IPR040233Domain of unknown function DUF2052PFAMPF09747DUF2052coord: 442..518
e-value: 3.2E-14
score: 53.5
coord: 243..286
e-value: 2.5E-9
score: 37.5
IPR018613Ccdc97-likePANTHERPTHR31840FAMILY NOT NAMEDcoord: 124..302
coord: 440..522

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1021contigL-elsbetiae_contig1021:24846..28956 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1021.259.1mRNA_L-elsbetiae_contig1021.259.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1021 24671..28956 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1021.259.1 ID=prot_L-elsbetiae_contig1021.259.1|Name=mRNA_L-elsbetiae_contig1021.259.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=524bp
MSSGIDIDPLDAYMDSIAGEITQQAVEVPSPSPPSPPPTSSFPQLASPSP
AQRAIADKVSASPFCDILTSVQRGAGDTSWEHRTGSVAASQPSRAGGSGG
GGGGSGEANRPGGSGGAGEACLCLLLGHPAEFLSRFGHILSPGDLESLLP
SQDPVVALHIARLRTLMASQQQRQQQQQQQGEEQQQRQHQQERPASLSAD
EDVDMPSAPTTTAAVGRETGAAAGPGGTSGGGDSSGGGARVRNRRYRRLK
QLAEGGTWFSDEAMKERDPWLWFEYVGKRAGEEKPAPKQAVEQVPGSTSV
GTYLQESLGFLSQPQASGGWDTGAAQAGESRGGVGSSLGMAFLSGVCADA
GIPHVRAGATVDLSHVPAAPSTGAVASPGPPNVSSSGVSAGHGRSPDAHD
EMDTSTAAVTAAVGAFGIGDRENGIGSGARRVRFVDERGEDSDGGEGRGE
RVDDNSDLMQEEEEEEEVGAGREEVARILSERFLAGLEEGVNYKNVDEDE
RLDDLEQLSRDEQDRWFRGEEDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040233DUF2052
IPR018613Ccdc97-like