prot_L-elsbetiae_contig10207.253.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10207.253.1
Unique Nameprot_L-elsbetiae_contig10207.253.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length201
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig10207.253.1 vs. uniprot
Match: A0A6H5JRF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF0_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 3.690e-32
Identity = 92/159 (57.86%), Postives = 103/159 (64.78%), Query Frame = 0 
Query:   13 LSDARKAEASREI-----SSDGESSGRAGTQEEVWRLRRDCDRLRDQLGEFENGDVPPPGAKRMKSLEDQVERLSEENMRQIENARFLALRVEREKEELSQELISAKLQVAQLYMEVDGLKLQHRQAT-VAAEAAHALEMESASASPANSKSDPPSPAS 165
            L+D R+A   RE      S+D  +SG AG++EEV RLRRDCD+LRDQL EFE G+VPPPGAKR+KSLE QVERLSEENMRQ + A                             MEVDGLKLQHRQAT VAA  AHAL M+SAS SPA  KS PPSPAS
Sbjct:  658 LNDLRRAGGVREAARRGGSADDLTSGEAGSEEEVLRLRRDCDKLRDQLSEFEGGEVPPPGAKRIKSLEAQVERLSEENMRQSDKANXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVDGLKLQHRQATAVAAREAHALGMDSASGSPATPKSAPPSPAS 816
[Close]
BLAST of mRNA_L-elsbetiae_contig10207.253.1 vs. uniprot
Match: D8LMU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU0_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 2.410e-23
Identity = 63/81 (77.78%), Postives = 69/81 (85.19%), Query Frame = 0 
Query:   86 MRQIENARFLALRVEREKEELSQELISAKLQVAQLYMEVDGLKLQHRQAT-VAAEAAHALEMESASASPANSKSDPPSPAS 165
            MRQ + A  LA++VEREKEEL+Q+LISAKLQVAQLYMEVDGLKLQHRQAT VAA  AHAL M+SAS SPA  KS PPSPAS
Sbjct:    1 MRQSDKANSLAVQVEREKEELNQQLISAKLQVAQLYMEVDGLKLQHRQATAVAAREAHALGMDSASGSPATPKSAPPSPAS 81
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10207.253.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JRF0_9PHAE3.690e-3257.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMU0_ECTSI2.410e-2377.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 34..54
NoneNo IPR availableCOILSCoilCoilcoord: 71..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10207contigL-elsbetiae_contig10207:4948..6737 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10207.253.1mRNA_L-elsbetiae_contig10207.253.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10207 4927..6737 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10207.253.1 ID=prot_L-elsbetiae_contig10207.253.1|Name=mRNA_L-elsbetiae_contig10207.253.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=201bp
MLKDVSAERDAALSDARKAEASREISSDGESSGRAGTQEEVWRLRRDCDR
LRDQLGEFENGDVPPPGAKRMKSLEDQVERLSEENMRQIENARFLALRVE
REKEELSQELISAKLQVAQLYMEVDGLKLQHRQATVAAEAAHALEMESAS
ASPANSKSDPPSPASHQYSQSPPSPASPPPASPPPISPSGSLASPNTMEL
*
back to top