prot_L-elsbetiae_contig10200.248.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10200.248.1
Unique Nameprot_L-elsbetiae_contig10200.248.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length100
Homology
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BLAST of mRNA_L-elsbetiae_contig10200.248.1 vs. uniprot
Match: A0A6H5KTV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV5_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 4.500e-14
Identity = 54/99 (54.55%), Postives = 70/99 (70.71%), Query Frame = 0 
Query:    6 GSVLVELYCAMVACMPLAALAQ-----------GVRLLTAGSAGRSILGL-PAAGGGDAGAGLVGPSAQGAARFALATAATGHAIVALALKLLQGRTGG 92
            GSV++ELY A+VA MP A +AQ           G++LL  G  GR+++GL P  G  + G+G  G +AQGAARFALATAATGHA++A+ALKLL+ RTGG
Sbjct:  174 GSVVIELYVAVVAFMPAAGIAQASQGAGWKEIKGLQLLILGPVGRNLMGLAPPTGHNNDGSGG-GTNAQGAARFALATAATGHAVIAVALKLLEERTGG 271
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BLAST of mRNA_L-elsbetiae_contig10200.248.1 vs. uniprot
Match: D8LKN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKN2_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 6.320e-7
Identity = 42/90 (46.67%), Postives = 54/90 (60.00%), Query Frame = 0 
Query:    6 GSVLVELYCAMVACMPLAALAQGVRLLTAGSAGRSILGL-PAAGGGDAGAGLVGPSAQGAARFALAT--AATGHAIVALALKLLQGRTGG 92
            GSV+VELY A+VA MP A +AQG++LL  G  GR+++GL P  G  D G                    AATGHA++ +ALKLL+ RTGG
Sbjct:  221 GSVVVELYVAVVAFMPAAGIAQGLQLLILGPVGRNLMGLAPPTGHNDGGXXXXXXXXXXXXXXXXXXXXAATGHAVITVALKLLEERTGG 310
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10200.248.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KTV5_9PHAE4.500e-1454.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKN2_ECTSI6.320e-746.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10200contigL-elsbetiae_contig10200:1717..2864 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10200.248.1mRNA_L-elsbetiae_contig10200.248.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10200 1717..2864 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10200.248.1 ID=prot_L-elsbetiae_contig10200.248.1|Name=mRNA_L-elsbetiae_contig10200.248.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=100bp
GTVAAGSVLVELYCAMVACMPLAALAQGVRLLTAGSAGRSILGLPAAGGG
DAGAGLVGPSAQGAARFALATAATGHAIVALALKLLQGRTGGGGGGGRGG
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