prot_L-elsbetiae_contig10187.235.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10187.235.1
Unique Nameprot_L-elsbetiae_contig10187.235.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length408
Homology
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BLAST of mRNA_L-elsbetiae_contig10187.235.1 vs. uniprot
Match: D7G7D8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7D8_ECTSI)

HSP 1 Score: 390 bits (1002), Expect = 2.380e-131
Identity = 185/248 (74.60%), Postives = 215/248 (86.69%), Query Frame = 0 
Query:    4 NDHPQGRLVDQLRANMDYCAAWMLVRPNELVRVSAAFQQAFPAPSDGKDRCDFVAAVPIRVAYQDWKTYRGVSATGTPDGVPSSPQKIQLYPRTRKGERLLQEAENRVGMRWSPTPTLPWRMLERMATHDVHWEENVEMFVLCAGYEATPPGSGICIELSVTGMVRAEDGGDGQKAGARVAREVLGLPGANGQKWFVFHVSRPDESDDEAHSITVRTIVETSKMSAGPRRPEASGGAPQPTQPVATPP 251
            NDHP GR++DQLRA++DYC++WMLVRP+ELVRVSAAFQ AFPAP+DGKDRCDFVAAVP+R+AY DW+ YRG+S TGTPDGVPS+PQ+IQLYPRTRKGERLLQ+ +NRVGMRWSPTP  PW+ LERMATHD +WE N + ++LCAGYEA PPGSG+ IELSVT M++AED GDGQ+AGARVAREVLGLPGANGQKWFVFHVSRPDE+ +EA +IT+R IV+TSKM   PR P   G APQ  QP   PP
Sbjct:   55 NDHPNGRIMDQLRASIDYCSSWMLVRPHELVRVSAAFQAAFPAPNDGKDRCDFVAAVPVRLAYNDWQRYRGISTTGTPDGVPSNPQQIQLYPRTRKGERLLQDPQNRVGMRWSPTPYRPWKTLERMATHDQYWESNQDHYLLCAGYEAFPPGSGVYIELSVTDMMKAEDAGDGQRAGARVAREVLGLPGANGQKWFVFHVSRPDEAHEEAFNITIRAIVDTSKMPGVPR-PHEPGRAPQLAQPPVLPP 301
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10187.235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7D8_ECTSI2.380e-13174.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 267..302
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 357..408
e-value: 4.2E-7
score: 31.6
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 363..406
e-value: 6.4E-5
score: 23.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10187contigL-elsbetiae_contig10187:192..4267 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10187.235.1mRNA_L-elsbetiae_contig10187.235.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10187 192..4268 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10187.235.1 ID=prot_L-elsbetiae_contig10187.235.1|Name=mRNA_L-elsbetiae_contig10187.235.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=408bp
VCLNDHPQGRLVDQLRANMDYCAAWMLVRPNELVRVSAAFQQAFPAPSDG
KDRCDFVAAVPIRVAYQDWKTYRGVSATGTPDGVPSSPQKIQLYPRTRKG
ERLLQEAENRVGMRWSPTPTLPWRMLERMATHDVHWEENVEMFVLCAGYE
ATPPGSGICIELSVTGMVRAEDGGDGQKAGARVAREVLGLPGANGQKWFV
FHVSRPDESDDEAHSITVRTIVETSKMSAGPRRPEASGGAPQPTQPVATP
PNRSGTPPAATPADPALQQHNLQQRQQQQKRNQQQQQQLKKQQRRQLQQQ
QLSSSSAYAFSNSTAPDQPGIVSFGSFTADESAAAATTGPPPPQPSPPPP
PPPQPQQPENPGVDELTELLASLNMTKYRPKFDDQNVDFKALKTMTVEDQ
LSGIGIPL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013761SAM/pointed_sf
IPR001660SAM