prot_L-elsbetiae_contig10151.203.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10151.203.1
Unique Nameprot_L-elsbetiae_contig10151.203.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length221
Homology
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BLAST of mRNA_L-elsbetiae_contig10151.203.1 vs. uniprot
Match: A0A6H5JB41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB41_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 4.450e-62
Identity = 119/220 (54.09%), Postives = 145/220 (65.91%), Query Frame = 0 
Query:    4 TIPGKVGAAAIQKQIDSIRTRRTRG-GDSSP--GGRIHWATSKASGDRAAAAAAISALPRAVWVLIFGQGSSQF-SSGCAQRGLYCLWSKGLNSAVAFQERDGALRYAFKLRARGLGVPGPTRVAMKDLQRFCSDNGFGVWVVPADVVPEAPQRTKNVMGFDPAAGDSRRSMQGXXXXXXXXXXXXXXXXXXXXXXERSVLTPEDVRKWRADFERLYAQD 219
            +IP  VG+AAI++QIDSI+  R+RG G  +P  G  I W  S  S  RA      + LPRAVWVL+F QGS  F SS   QRGLYCLWSKG NSA+AF+ER+GALRYAFKL+ +GLG+P PTRV+M DLQRFC D+ FG+ ++PADVVPEAP++TK  +GFDP    S  S  G                         VLTP+D+RKWRA FERLYAQ+
Sbjct:   70 SIPDSVGSAAIRRQIDSIK--RSRGAGKRTPRQGESIRWVASTESEHRARP----TLLPRAVWVLLFSQGSGSFGSSSEPQRGLYCLWSKGTNSALAFEEREGALRYAFKLKEKGLGIPTPTRVSMTDLQRFCLDHSFGIRMIPADVVPEAPRKTKKDLGFDPLNLTS--SPHGRRDAGEDAGP---------------VLTPDDIRKWRAKFERLYAQE 266
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BLAST of mRNA_L-elsbetiae_contig10151.203.1 vs. uniprot
Match: D8LLX3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX3_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 2.610e-34
Identity = 74/132 (56.06%), Postives = 92/132 (69.70%), Query Frame = 0 
Query:    4 TIPGKVGAAAIQKQIDSIRT-----RRTRGGDSSPGGRIHWATSKASGDRAAAAAAISALPRAVWVLIFGQGSSQFSSGCA-QRGLYCLWSKGLNSAVAFQERDGALRYAFKLRARGLGVPGPTRVAMKDLQ 129
            +IP +VG+AAI+++IDSI+      +RT   D S    I W  S  SG RA +    + LPRAVWVLIF QGS  FSS    QRGLYCLWSKG NSA+AF+ER+GALRYAFKL+ +GLG+P PTRV+M   +
Sbjct:   22 SIPDRVGSAAIRRRIDSIKRSRGAGKRTPRQDES----IRWVASTESGHRARS----TLLPRAVWVLIFNQGSGSFSSSSEPQRGLYCLWSKGTNSALAFEEREGALRYAFKLKEKGLGIPRPTRVSMTSFE 145
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10151.203.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JB41_9PHAE4.450e-6254.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLX3_ECTSI2.610e-3456.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021503Protein of unknown function DUF3110PFAMPF11360DUF3110coord: 62..146
e-value: 2.0E-11
score: 43.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10151contigL-elsbetiae_contig10151:3760..5934 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10151.203.1mRNA_L-elsbetiae_contig10151.203.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10151 2699..7025 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10151.203.1 ID=prot_L-elsbetiae_contig10151.203.1|Name=mRNA_L-elsbetiae_contig10151.203.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=221bp
MDETIPGKVGAAAIQKQIDSIRTRRTRGGDSSPGGRIHWATSKASGDRAA
AAAAISALPRAVWVLIFGQGSSQFSSGCAQRGLYCLWSKGLNSAVAFQER
DGALRYAFKLRARGLGVPGPTRVAMKDLQRFCSDNGFGVWVVPADVVPEA
PQRTKNVMGFDPAAGDSRRSMQGGGGWGGRGDDMFPSSSSSEEEQERSVL
TPEDVRKWRADFERLYAQDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021503DUF3110