prot_L-elsbetiae_contig1015.199.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1015.199.1
Unique Nameprot_L-elsbetiae_contig1015.199.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length107
Homology
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BLAST of mRNA_L-elsbetiae_contig1015.199.1 vs. uniprot
Match: D8LSF7_ECTSI (C2-C2_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF7_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 1.920e-12
Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 0 
Query:   74 MDGLTWEEKYLRLRDDHTSLTHKANEQDDTIRR 106
            M+GLTWEEKYLRLRDDHTSLTHKANEQDDTIRR
Sbjct:    1 MEGLTWEEKYLRLRDDHTSLTHKANEQDDTIRR 33
[Close]
BLAST of mRNA_L-elsbetiae_contig1015.199.1 vs. uniprot
Match: A0A836CCF4_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCF4_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.360e-6
Identity = 23/33 (69.70%), Postives = 29/33 (87.88%), Query Frame = 0 
Query:   74 MDGLTWEEKYLRLRDDHTSLTHKANEQDDTIRR 106
            M+ L++EE+YL LRD+H SLTHK NEQ+DTIRR
Sbjct:    1 MEALSYEERYLSLRDEHVSLTHKCNEQEDTIRR 33
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1015.199.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSF7_ECTSI1.920e-1296.97C2-C2_1 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CCF4_9STRA2.360e-669.70EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1015contigL-elsbetiae_contig1015:18339..18917 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1015.199.1mRNA_L-elsbetiae_contig1015.199.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1015 18339..18917 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1015.199.1 ID=prot_L-elsbetiae_contig1015.199.1|Name=mRNA_L-elsbetiae_contig1015.199.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=107bp
TTRTSKIHTTSEINRLRDVNRLRDDELFLCALLLQRPKTLLQGCLLKGSG
RLGFGSSEDGRWHRRTPVTSYGVMDGLTWEEKYLRLRDDHTSLTHKANEQ
DDTIRR*
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