prot_L-elsbetiae_contig1015.198.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1015.198.1
Unique Nameprot_L-elsbetiae_contig1015.198.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length112
Homology
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BLAST of mRNA_L-elsbetiae_contig1015.198.1 vs. uniprot
Match: D8LSF7_ECTSI (C2-C2_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF7_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 8.960e-42
Identity = 90/113 (79.65%), Postives = 97/113 (85.84%), Query Frame = 0 
Query:    1 MGATSQKEDRKLAELVDKLRQRVSNAEEQLKGVRAENNRLRQDKLDAGCAPEDAHEQAMAAXXXXXXXXXXXXX-NQEEVETLHRELREAQAKAQLIQARFDHLEARTLAQAD 112
            MGAT +++DRKL+ELVDKLRQRVS+AEEQLKGV+AEN RLRQDKLDAGCAPEDAHEQAMAA              +QEEVETLHRELREAQAKAQLIQARFDHLEARTLAQAD
Sbjct:  171 MGATRRRDDRKLSELVDKLRQRVSSAEEQLKGVKAENQRLRQDKLDAGCAPEDAHEQAMAAAAAAHREPPGGRGRSQEEVETLHRELREAQAKAQLIQARFDHLEARTLAQAD 283
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1015.198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSF7_ECTSI8.960e-4279.65C2-C2_1 domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 9..43
NoneNo IPR availableCOILSCoilCoilcoord: 72..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1015contigL-elsbetiae_contig1015:15292..16468 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1015.198.1mRNA_L-elsbetiae_contig1015.198.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1015 15292..16468 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1015.198.1 ID=prot_L-elsbetiae_contig1015.198.1|Name=mRNA_L-elsbetiae_contig1015.198.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=112bp
MGATSQKEDRKLAELVDKLRQRVSNAEEQLKGVRAENNRLRQDKLDAGCA
PEDAHEQAMAAAAAARREPAGGRRNQEEVETLHRELREAQAKAQLIQARF
DHLEARTLAQAD
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