prot_L-elsbetiae_contig10142.195.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10142.195.1
Unique Nameprot_L-elsbetiae_contig10142.195.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length170
Homology
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BLAST of mRNA_L-elsbetiae_contig10142.195.1 vs. uniprot
Match: D7FQD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQD6_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 1.180e-52
Identity = 76/110 (69.09%), Postives = 93/110 (84.55%), Query Frame = 0 
Query:    1 DLYVDPTELDCKGRHLFCHSCIHDFLTSEACTNKCPVCTTDIGYKRRTDILHAGRKREASGQPVGSSRKYQSQAVGLVQDMIEWLIDKRMVDYDDESEWRRRSGLEPLPP 110
            DL+VDP ELDCKG+HL+CHSCI+D + + +C NKCP+C T I    R  IL AGRKR ASG PVG++++YQSQAVGLVQ++IEWLI+KRMV YDDE+EWR+RSGLEPLPP
Sbjct:    4 DLFVDPIELDCKGKHLYCHSCIYDLVKNGSCQNKCPICMTSISSSTRKKILQAGRKRGASGMPVGANKRYQSQAVGLVQEVIEWLIEKRMVKYDDETEWRKRSGLEPLPP 113
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BLAST of mRNA_L-elsbetiae_contig10142.195.1 vs. uniprot
Match: A0A6H5JHZ8_9PHAE (RING-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHZ8_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 2.380e-52
Identity = 77/110 (70.00%), Postives = 93/110 (84.55%), Query Frame = 0 
Query:    1 DLYVDPTELDCKGRHLFCHSCIHDFLTSEACTNKCPVCTTDIGYKRRTDILHAGRKREASGQPVGSSRKYQSQAVGLVQDMIEWLIDKRMVDYDDESEWRRRSGLEPLPP 110
            DL+VDP ELDCKG+HL+CHSCI+D + +E+C NKCP C T I    R  IL AGRKR ASG PVG++++YQSQAVGLVQ++IEWLI+KRMV YDDE+EWR+RSGLEPLPP
Sbjct:  141 DLFVDPIELDCKGKHLYCHSCIYDLVKNESCQNKCPTCMTSISSSTRKKILQAGRKRGASGMPVGANKRYQSQAVGLVQEVIEWLIEKRMVKYDDETEWRKRSGLEPLPP 250
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10142.195.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQD6_ECTSI1.180e-5269.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHZ8_9PHAE2.380e-5270.00RING-type domain-containing protein (Fragment) n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..70
e-value: 4.8E-8
score: 34.6
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10142contigL-elsbetiae_contig10142:623..1790 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10142.195.1mRNA_L-elsbetiae_contig10142.195.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10142 623..1790 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10142.195.1 ID=prot_L-elsbetiae_contig10142.195.1|Name=mRNA_L-elsbetiae_contig10142.195.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=170bp
DLYVDPTELDCKGRHLFCHSCIHDFLTSEACTNKCPVCTTDIGYKRRTDI
LHAGRKREASGQPVGSSRKYQSQAVGLVQDMIEWLIDKRMVDYDDESEWR
RRSGLEPLPPPPKAPGGSGSKAGPMYRGSVGSRSVHRGIFSAGGSAGGAA
EVINLLSDSMDEEDDDDDDD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD