prot_L-elsbetiae_contig101.137.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig101.137.1
Unique Nameprot_L-elsbetiae_contig101.137.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length297
Homology
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Match: D8LMR9_ECTSI (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR9_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 2.440e-74
Identity = 135/284 (47.54%), Postives = 178/284 (62.68%), Query Frame = 0
Query:    5 RLALVIAFGPPGTGKTSTILAMAKEYYQNDFRSMVMEINASDDRGLDVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVLVRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFEEGAVEVVLDLSNGDARRVINLVQSAFLSTQRPSTTSAISVEHVYQLSGSISPKDMDRIFRTLLEKSFKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAFSTDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIVSSF 288
            +L  ++ +GPPGTGKTSTILA AK+ Y  DF+ MV+E+NASDDRG+DVV+G+IK F  T  L    VKLVILDEADA+T +AQ ALR V+EK +   RFC  CNYVNKI   LQSRCTKFRF  +  + ++     + ++E +      VE V+ L  GD RRV+NL+QS  ++ Q+      +   H Y  + +   +DM+ I   LL  SFKD+FD I KL   KGY+L DIV  L  +V+         +  LLDE SN E  LA GGSE+L +G +V +F
Sbjct:   95 KLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPEQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQK------VDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDIVQELALKVME-IELPAAVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAF 371          
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Match: A0A7S2XZS5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZS5_9STRA)

HSP 1 Score: 234 bits (597), Expect = 4.050e-72
Identity = 129/284 (45.42%), Postives = 179/284 (63.03%), Query Frame = 0
Query:    5 RLALVIAFGPPGTGKTSTILAMAKEYYQNDFRSMVMEINASDDRGLDVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVLVRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFEEGAVEVVLDLSNGDARRVINLVQSAFLSTQRPSTTSAISVEHVYQLSGSISPKDMDRIFRTLLEKSFKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAFSTDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIVSSF 288
            RL  ++ +GPPGTGKTSTILA A+  Y  +F SM +E+NASDDRG+DVV+ +IK+F  T  L    +KLVILDEADA+T++AQ ALR V+E+ +   RFC  CNYV+KI   LQSRC +FRF  +  D ++   +E+ +KEG+       E +L   NGD RR++NL+QS  ++         +++E V+  SGS  P D++ +   LL  SFK+S+  I  L   KGYAL D++S L   V +        LC LL E SNIEY L+ G S+KL +G +V +F
Sbjct:   46 RLPHLLFYGPPGTGKTSTILACARRIYGKNFSSMTLEMNASDDRGIDVVREQIKNFASTRRLFSSGMKLVILDEADAMTSDAQFALRRVIEQYTRHTRFCMICNYVSKIIPALQSRCMRFRFGPLRSDQVQDRLNEVIDKEGVAITPEGKESILKHGNGDMRRILNLLQSTSMAYDE------VTLETVHLTSGSPLPDDVEAVLHQLLNSSFKESYQFILGLAVTKGYALADLLSELVVLV-SRVQLPPAVLCPLLSELSNIEYRLSSGASDKLQLGALVGAF 322          
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Match: M2Y763_GALSU (Replication factor C subunit n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y763_GALSU)

HSP 1 Score: 231 bits (590), Expect = 4.320e-71
Identity = 122/283 (43.11%), Postives = 184/283 (65.02%), Query Frame = 0
Query:    9 VIAFGPPGTGKTSTILAMAKEYYQNDFRSMVMEINASDDRGLDVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVLVRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFEEGAVEVVLDLSNGDARRVINLVQSAFLSTQRPSTTSAISVEHVYQLSGSISPKDMDRIFRTLLEKS-FKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAFSTDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIVSSFHL 290
            ++ +GPPGTGKTSTILA A+  Y  +F+SMV+E+NASDDRG+DVV+  IK F  T  +    VKLVILDEADA+T+ AQ ALR +MEK +   RFC  CNY NKI   LQSRCT+FRF  +  + ++    +I E+EG++FE+ A+E ++ LS GD R  IN++QS FLS+ +      ++   VY+ +G+ S ++M++I   L E+  F   +D + K+  ++G+AL DI+  +  R+L    +   +   LL++ ++IE+  A GGSE L +  ++ SF +
Sbjct:   44 MLFYGPPGTGKTSTILACAEHMYGTNFKSMVLELNASDDRGIDVVRNEIKDFCSTQRIFATGVKLVILDEADAMTSAAQMALRRIMEKYTTSTRFCLICNYANKIIPALQSRCTRFRFGPLKEEDIRLRLGQIAEREGVVFEKDALETIIQLSQGDMRSCINILQSTFLSSGK------VTCSTVYENTGNPSNEEMEQIMDWLNEEDDFSSCYDKVKKMKAERGFALIDILRQIHKRLLTRNMSRRAKAY-LLEKLADIEHQFAFGGSELLNLCSLIGSFQI 319          
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Match: A0A2P6NXL0_9EUKA (Replication factor C subunit 5-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NXL0_9EUKA)

HSP 1 Score: 230 bits (587), Expect = 2.130e-70
Identity = 120/279 (43.01%), Postives = 180/279 (64.52%), Query Frame = 0
Query:   12 FGPPGTGKTSTILAMAKEYYQNDFRSMVMEINASDDRGLDVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVLVRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFEEGAVEVVLDLSNGDARRVINLVQSAFLSTQRPSTTSAISVEHVYQLSGSISPKDMDRIFRTLLEKSFKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAFSTDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIVSSFHL 290
            +GPPGTGKTSTILA+A++ Y  ++  M++E+NASDDRG++VV+ +IK F  T S+    +KLV+LDEADA+T  AQ+ALR V+EK +   RFC  CNY+NK++  +QSRCT+FRF  +  D +    ++I + EG+   E  +  V+ L  GD R+ +N++QSA +   +      I  E +YQ +G   P D+  IF TL  K FK + D I+KL   KG AL DI++ L  ++L    ++  ++  L+D+ ++IE+ LA G SEKL +G +V +F L
Sbjct:   68 YGPPGTGKTSTILAVARKLYGKNYSQMILELNASDDRGINVVRDQIKDFANTRSMFTTGLKLVVLDEADAMTQPAQAALRRVIEKYTKTTRFCLICNYLNKLTPAIQSRCTRFRFGPLMTDDVIDRVTQISKLEGVKITEAGLSAVVRLGQGDMRKCLNVLQSAHMGYDK------IDEEEIYQCTGQPLPSDIQTIFDTLFNKGFKFAVDKISKLQSTKGLALQDIITELHRKILKVEFSEEVKMI-LIDKLADIEHRLAAGTSEKLNLGALVGAFQL 339          
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Match: A0A7S1BB71_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BB71_9STRA)

HSP 1 Score: 229 bits (584), Expect = 6.200e-70
Identity = 129/295 (43.73%), Postives = 183/295 (62.03%), Query Frame = 0
Query:    5 RLALVIAFGPPGTGKTSTILAMAKEYYQNDFRSMVMEINASDDRGLDVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVLVRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFEEGAVEVVLDLSNGDARRVINLVQSAFL---STQRPSTTSAISV--------EHVYQLSGSISPKDMDRIFRTLLEKSFKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAFSTDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIVSSF 288
            RL  ++ +GPPGTGKTSTI+A A++ Y + + SM +E+NASD RG+DVV+  IK F  T  L  +  K++ILDEADA+T++AQ ALR ++EK S   RFC  CNYV+KI   LQSRCTKFRF  +    +     E+ EKEG+  ++G V+ +L LS GD RRV+NL+QSA++   S  + ++ SA SV          VY  +G   P+D+++I   LL  SF D+F  I K+    GY LTD++  +T  V++    D   L ++L+  S  E+ LA G  EKL +G +V  F
Sbjct:   47 RLPHLLFYGPPGTGKTSTIVAAARKMYGDGYGSMTLELNASDARGIDVVRNEIKEFAGTRQLFSRGTKMIILDEADAMTSDAQFALRRIIEKFSRNARFCLICNYVSKIIPALQSRCTKFRFAPLAEKLIHGRLMEVVEKEGVEIDKGGVDAILSLSGGDMRRVMNLLQSAYMNSVSISKEASDSATSVLALTTVTSRAVYMTAGHPLPEDVEKICDNLLNSSFPDAFSRIWKICTTNGYGLTDVLIDVTTAVMSMDLPDGV-LAEILEGMSECEHRLAFGTDEKLQLGGLVGVF 340          
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Match: B7FY37_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FY37_PHATC)

HSP 1 Score: 228 bits (581), Expect = 1.230e-69
Identity = 123/282 (43.62%), Postives = 178/282 (63.12%), Query Frame = 0
Query:    9 VIAFGPPGTGKTSTILAMAKEYYQND--FRSMVMEINASDDRGLDVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVLVRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFEEGAVEVVLDLSNGDARRVINLVQSAFLSTQRPSTTSAISVEHVYQLSGSISPKDMDRIFRTLLEKSFKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAFSTDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIVSSF 288
            ++ +GPPGTGKTSTI+A AK  Y +   + SM +E+NASD RG+DVV+  IK F  T  L  K +KL+ILDEADA+T++AQ ALR ++EK +   RFC  CNYV+KI   LQSRCT+FRF  ++RD ++   +E+ E E     +  ++ +L LS GD RRV+NL+QS  +S +    TS      VY  SG+  P DMD+I   L+  +F+ + + I  +   KGYAL D+++ LT +++   + D+  L  LLD  SN+E+ LA G  EK+ +  +V  F
Sbjct:   53 LLLYGPPGTGKTSTIVAAAKRMYGSSSAYSSMTLELNASDARGIDVVRNEIKEFAGTKQLFNKGIKLIILDEADAMTSDAQFALRRIIEKYTKNARFCLVCNYVSKIIPALQSRCTRFRFAPLSRDQIEGRLTEVAEAEKCKTTQDGIDAILRLSGGDMRRVLNLLQSTAMSAEVVDETS------VYLTSGAPLPADMDQILDWLMNHNFQTACEQITAMCTMKGYALADVLAELTSKIMCLENLDSVPLGMLLDGMSNVEHRLAFGPDEKIQIASLVGVF 328          
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Match: S0F304_CHOCR (AAA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F304_CHOCR)

HSP 1 Score: 227 bits (579), Expect = 1.730e-69
Identity = 126/281 (44.84%), Postives = 178/281 (63.35%), Query Frame = 0
Query:    5 RLALVIAFGPPGTGKTSTILAMAKEYYQNDFRSMVMEINASDDRGLDVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVLVRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFEEGAVEVVLDLSNGDARRVINLVQSAFLSTQRPSTTSAISVEHVYQLSGSISPKDMDRIFRTLLEKSFKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAFSTDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIV 285
            RL  ++  GPPGTGKTSTILA AKE Y + F+SMV+E+NASDDRG+ VV+ +IKSF  T  +    VKL++LDEADA+TT AQ ALR V+EK +   RFC  CNYVNKI   LQSRCTKFRF  +  D +++   EI   E +      +E +L L  GD RR++N++QS  L++   +    I+ + VY  +G+  P D+   +  LLE++F DS   +  L+QDKG AL DI++ L P V  +  + N ++  + +  S+IEY +A G  EKL +  ++
Sbjct:   32 RLPHLLFCGPPGTGKTSTILACAKEMYGSSFKSMVLELNASDDRGIGVVRDQIKSFASTKRIFSSGVKLIVLDEADAMTTAAQMALRRVVEKYAANTRFCIICNYVNKIIPALQSRCTKFRFGPLPADDVRKRVLEIAAFESVSISSDGLEALLILGKGDMRRILNVLQSTHLASSG-ARGGEITADAVYSNTGAPHPGDVKAAWGWLLERTFPDSSAKLRTLMQDKGLALGDIITELFPLVSTSSLSKNAKMY-MFESLSDIEYRMATGSLEKLNMAALI 310          
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Match: A0A7S3UU54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU54_HETAK)

HSP 1 Score: 228 bits (580), Expect = 2.080e-69
Identity = 125/290 (43.10%), Postives = 178/290 (61.38%), Query Frame = 0
Query:    5 RLALVIAFGPPGTGKTSTILAMAKEYYQNDFRSMVMEINASDDRGLDVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVLVRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFEEGAVEVVLDLSNGDARRVINLVQSAFLSTQRPSTTSAISVEHVYQLSGSISPKDMDRIFRTLLEKSFKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAFSTDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIVSSFHLENRS 294
            RL  ++ +GPPGTGKTSTILA A+  Y   F SMV+E+NASDDRG+DVV+ ++K F  T  L    VKLV+LDEADA+T +AQ ALR V+EK +   RFC  CNYVN++   LQSRCT+FRF  +    +      + E+EG+   E   + +LDL  GD RRV+NL+Q+ F++         ++ ++VY  SG    +DMD I++ L  +  K ++D I  ++  KGYALTDI+  +   V AA       +C LL   S+IE+ LA G +E+L +G +  +F    R+
Sbjct:   52 RLPHLLFYGPPGTGKTSTILACARRLYGKSFASMVLELNASDDRGIDVVRNQVKEFAGTRRLFSSGVKLVVLDEADAMTADAQFALRRVIEKYTRHTRFCMICNYVNRVIPALQSRCTRFRFAPLQHGQVVGRLQHVVEQEGVPLTEDGRQALLDLGQGDMRRVLNLLQATFMAYGE------VTKQNVYLTSGHPLEEDMDLIYQKLNNEDLKPTYDCILHMMSSKGYALTDILHDVGILV-AATEYPPEVMCQLLIALSDIEHRLASGATERLQLGALAGAFQAARRA 334          
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Match: A0A6T8HB61_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8HB61_9STRA)

HSP 1 Score: 228 bits (581), Expect = 2.690e-69
Identity = 127/281 (45.20%), Postives = 169/281 (60.14%), Query Frame = 0
Query:    9 VIAFGPPGTGKTSTILAMAKEYY-QNDFRSMVMEINASDDRGLDVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVLVRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFEEGAVEVVLDLSNGDARRVINLVQSAFLSTQRPSTTSAISVEHVYQLSGSISPKDMDRIFRTLLEKSFKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAFSTDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIVSSF 288
            ++ +GPPGTGKTSTI+A AK  Y  N + SM +E+NASD RG+DVV+  IK F  T  L    VKL+ILDEADA+T +AQ ALR ++EK +   RFC  CNYV+KI   LQSRCTKFRF  ++RD +      +   E +   +  V+ +L LSNGD RRV+NL+Q+  +S +       +    VY  SGS  P+DM  I   LL  SF+ + D I+ +    GYAL D+++ LT  V  A       L DLLD  S+IEY L  G  E+L +G +V  F
Sbjct:   78 LLLYGPPGTGKTSTIVAAAKRMYGDNAYTSMALELNASDTRGIDVVRNEIKEFAGTRQLFRSGVKLIILDEADAMTNDAQFALRRIIEKYTKNARFCLICNYVSKIIPALQSRCTKFRFAPLSRDQMHGRLIHVANCENVNITDNGVDAILSLSNGDMRRVLNLLQTTSMSNK----VKEVDETAVYLTSGSPLPRDMTTILDFLLNHSFRSAIDSISTMCSTNGYALCDVLTDLTTMV-CAMELPGFVLADLLDGLSDIEYRLTFGADERLQIGSLVGVF 353          
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Match: A0A7S2W057_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W057_9STRA)

HSP 1 Score: 226 bits (575), Expect = 9.840e-69
Identity = 123/282 (43.62%), Postives = 172/282 (60.99%), Query Frame = 0
Query:    9 VIAFGPPGTGKTSTILAMAKEYYQND--FRSMVMEINASDDRGLDVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVLVRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFEEGAVEVVLDLSNGDARRVINLVQSAFLSTQRPSTTSAISVEHVYQLSGSISPKDMDRIFRTLLEKSFKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAFSTDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIVSSF 288
            ++ +GPPGTGKTSTI+A AK  Y     + SM +E+NASD RG+D V+ +IK F  T  L  K +KL+ILDEADA+T +AQ ALR ++EK +   RFC  CNYV+KI   LQSRCT+FRF  ++RD ++    ++  +E     EG +E +L LS GD RRV+NL+QS  +S +    TS      VY  SG+  P D+D I  +L    F  +++++  +   KGYA+ DI++ LT  ++      +  L DLLD  SNIEY LA G  EK+    +V  F
Sbjct:   54 LLFYGPPGTGKTSTIVAAAKRMYGGSAAYSSMALELNASDARGIDTVRNQIKEFAGTRQLFNKGIKLIILDEADAMTNDAQFALRRIIEKYTKNARFCLICNYVSKIIPALQSRCTRFRFSPLSRDQIRDRLCDVARQEDCNISEGGIEAILSLSGGDMRRVLNLLQSTAMSFETIDETS------VYLTSGAPLPSDIDTITNSLFNDDFVKAYENLITMCSTKGYAMADILTDLTT-IVTTMKLPSGVLADLLDGMSNIEYRLAYGTDEKIQGASLVGVF 328          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMR9_ECTSI2.440e-7447.54AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2XZS5_9STRA4.050e-7245.42Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
M2Y763_GALSU4.320e-7143.11Replication factor C subunit n=2 Tax=Galdieria sul... [more]
A0A2P6NXL0_9EUKA2.130e-7043.01Replication factor C subunit 5-like n=1 Tax=Planop... [more]
A0A7S1BB71_9STRA6.200e-7043.73Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
B7FY37_PHATC1.230e-6943.62Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
S0F304_CHOCR1.730e-6944.84AAA domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A7S3UU54_HETAK2.080e-6943.10Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6T8HB61_9STRA2.690e-6945.20Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2W057_9STRA9.840e-6943.62Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 5..130
e-value: 6.3E-8
score: 42.3
NoneNo IPR availableGENE3D1.10.8.60coord: 132..198
e-value: 3.3E-12
score: 47.8
NoneNo IPR availableGENE3D3.40.50.300coord: 3..128
e-value: 2.1E-34
score: 120.8
NoneNo IPR availableGENE3D1.20.272.10coord: 201..296
e-value: 1.4E-19
score: 71.9
NoneNo IPR availablePANTHERPTHR11669:SF9REPLICATION FACTOR C SUBUNIT 5coord: 5..292
NoneNo IPR availablePANTHERPTHR11669REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNITcoord: 5..292
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..296
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
IPR013748Replication factor C, C-terminalPFAMPF08542Rep_fac_Ccoord: 201..286
e-value: 2.8E-11
score: 43.7
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 10..125
e-value: 1.7E-14
score: 54.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..178
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalSUPERFAMILY48019post-AAA+ oligomerization domain-likecoord: 202..290

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig101contigL-elsbetiae_contig101:13816..14706 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig101.137.1mRNA_L-elsbetiae_contig101.137.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig101 13804..14706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig101.137.1 ID=prot_L-elsbetiae_contig101.137.1|Name=mRNA_L-elsbetiae_contig101.137.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=297bp
MTLTRLALVIAFGPPGTGKTSTILAMAKEYYQNDFRSMVMEINASDDRGL
DVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVL
VRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFE
EGAVEVVLDLSNGDARRVINLVQSAFLSTQRPSTTSAISVEHVYQLSGSI
SPKDMDRIFRTLLEKSFKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAF
STDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIVSSFHLENRSKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR013748Rep_factorC_C
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase
IPR008921DNA_pol3_clamp-load_cplx_C