prot_L-elsbetiae_contig101.136.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig101.136.1
Unique Name	prot_L-elsbetiae_contig101.136.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	425

Homology

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BLAST of mRNA_L-elsbetiae_contig101.136.1 vs. uniprot
Match: Q6XM01_9PHYC (FirrV-1-B35 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM01_9PHYC)

HSP 1 Score: 207 bits (526), Expect = 1.710e-58
Identity = 145/439 (33.03%), Postives = 226/439 (51.48%), Query Frame = 0

Query:    5 LAPPLLALIFEYHRAYQVKLLRE---VCKSFRDVLDDGGNSY-WKDMLGKYSSPLVKT--RVIYGKSVGVTALILKESFLLKTCVSCGLW-----FNTKKNRLHDILLCGRCSKKQVFRIVNLRKACTNYFLDYNVQKENHILVKLKKGRAYEVLLNHVRNVALAKYPNGDLEKRMNKRFSRLFRTELRKQKEKKKRIVDIGYKFCDILWETPSRVDKVLRDQNVLKDLVQKFGSRHDVFGDTLENRVRALRKCEVAARHLYDFGAMLTYMRKIHLLDDCYEVTSG---HRCHPRNIFRHHVNEGLHFYELSRLHADSREELLRRSSDVQIYLVQKKQR----EEGRKQLAIAMCAEDSTTYQADFFNSFILQGEGNPVFLARQQREKEYLQHNNLAWETGNFLLSGHDQENAQRLATNNVLQYTKGYPPMMRTCIIDL 425
            L  P+L  IF +H+      LRE   VCKSFR  L  G  S  W D+  +Y +       R+ +GKSVG TAL+L+ S +  TCVSCG          +K+  + + LCG C +   FR+ +L   C  +FLD     +   +  +K GRA+ +L + ++  A   YPNG L+ +M+KR  +     +RK + ++KRI D    F  ++    SR+D VL+DQ  L++ V+ F +   + GD  +N++ +     + A+   DF  +LTYM+K+ LL+   +       H  +P+ IF+ +V  GLHFY+    +A + ++L  R  DV+ ++   +QR     E R+QL ++MC E+   Y   +F  F++   GNP   AR+ R  E+L  N         +  G     A R A+  VL  T G+P M R C+IDL
Sbjct:    5 LPDPILMHIFLHHQPKDYDTLRELKHVCKSFRSAL--GTRSVVWNDLYFRYCNECAPNTGRLRWGKSVGTTALMLRLSSMTATCVSCGFQGRGFKMKPEKHPFYGVRLCGACVRLSPFRMESLTAMCQLFFLDRQHVLQGDTVTTIKIGRAFMLLFDKMKAEAERTYPNGLLKDKMDKREQKRILQSIRKIESQRKRIEDATNHFNVLVSCYSSRIDPVLQDQERLQEAVRYFSAISLLSGDFYDNKITSKTTPTLYAKKQLDFAELLTYMKKMGLLNREMQYADEDPVHAINPKYIFKIYVQNGLHFYDQVHQYAMAEQQLRARIQDVRTFINVNRQRLRSSTELRRQLCVSMCVEEGVDYCPIYFKDFVIYVVGNPCIQARRLRCFEFLTRNGHQEVVQKKISYGFSMSAAIRSASKYVLDQTNGFPVMSRACVIDL 441

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig101.136.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig101.136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
Q6XM01_9PHYC	1.710e-58	33.03	FirrV-1-B35 n=1 Tax=Feldmannia irregularis virus a...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..425
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..19
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 1..47 score: 8.915

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig101	contig	L-elsbetiae_contig101:10944..12218 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig101.136.1	mRNA_L-elsbetiae_contig101.136.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig101 10944..12218 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig101.136.1 ID=prot_L-elsbetiae_contig101.136.1|Name=mRNA_L-elsbetiae_contig101.136.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=425bp
MYAQLAPPLLALIFEYHRAYQVKLLREVCKSFRDVLDDGGNSYWKDMLGK
YSSPLVKTRVIYGKSVGVTALILKESFLLKTCVSCGLWFNTKKNRLHDIL
LCGRCSKKQVFRIVNLRKACTNYFLDYNVQKENHILVKLKKGRAYEVLLN
HVRNVALAKYPNGDLEKRMNKRFSRLFRTELRKQKEKKKRIVDIGYKFCD
ILWETPSRVDKVLRDQNVLKDLVQKFGSRHDVFGDTLENRVRALRKCEVA
ARHLYDFGAMLTYMRKIHLLDDCYEVTSGHRCHPRNIFRHHVNEGLHFYE
LSRLHADSREELLRRSSDVQIYLVQKKQREEGRKQLAIAMCAEDSTTYQA
DFFNSFILQGEGNPVFLARQQREKEYLQHNNLAWETGNFLLSGHDQENAQ
RLATNNVLQYTKGYPPMMRTCIIDL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom