prot_L-elsbetiae_contig10065.110.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10065.110.1
Unique Nameprot_L-elsbetiae_contig10065.110.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length113
Homology
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BLAST of mRNA_L-elsbetiae_contig10065.110.1 vs. uniprot
Match: D7FH98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH98_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 1.600e-12
Identity = 50/111 (45.05%), Postives = 59/111 (53.15%), Query Frame = 0 
Query:    3 DEWQEAVAGGDAEKLSGLVLLATGSKPETAMSLLRSCLRLLEGKTGTTPSQPDAATATTSANGHAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVLFTVENAQLLQPKG 113
            DEW  AVAGGDAEKLS LVL + GS  E A+S+L+SC+ +LE K         AAT TT ANG                    XXX        +P L T+EN QLLQP+G
Sbjct:    2 DEWNSAVAGGDAEKLSDLVLSSAGSSTEAALSILKSCVTILEKKQA-------AATGTTPANG----GPADGSPKSDVTGTTTXXXDSNGSAPSSPPLLTLENVQLLQPRG 101
[Close]
BLAST of mRNA_L-elsbetiae_contig10065.110.1 vs. uniprot
Match: A0A6H5KI43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI43_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 5.270e-7
Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 0 
Query:    3 DEWQEAVAGGDAEKLSGLVLLATGSKPETAMSLLRSCLRLLEGKTG 48
            DEW+ AVAGGDA KLS LVLL+ GS  + A+S+L+SC+ +LE   G
Sbjct:    2 DEWKSAVAGGDAAKLSDLVLLSAGSSTDAALSILKSCVTMLEKTQG 47
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10065.110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FH98_ECTSI1.600e-1245.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KI43_9PHAE5.270e-758.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10065contigL-elsbetiae_contig10065:1219..5008 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10065.110.1mRNA_L-elsbetiae_contig10065.110.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10065 1219..5021 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10065.110.1 ID=prot_L-elsbetiae_contig10065.110.1|Name=mRNA_L-elsbetiae_contig10065.110.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=113bp
MADEWQEAVAGGDAEKLSGLVLLATGSKPETAMSLLRSCLRLLEGKTGTT
PSQPDAATATTSANGHAPAPGSTSSPGRDNSSGSASSSSSSSSSSSAPVL
FTVENAQLLQPKG
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