prot_L-elsbetiae_contig1006.105.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1006.105.1
Unique Nameprot_L-elsbetiae_contig1006.105.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length203
Homology
BLAST of mRNA_L-elsbetiae_contig1006.105.1 vs. uniprot
Match: D7FTU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU6_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 4.670e-24
Identity = 54/85 (63.53%), Postives = 58/85 (68.24%), Query Frame = 0
Query:   75 IGGDEPLDRDEDGEADPVCDCELTDAQEEALANYDNGGKIVVCDPTCLDSDVDQLHCNYFGLGQICRGCGTCSDCRPCPGTTPTP 159
            +G D  +D DE      VC   LTD Q   LA+YDNGGK VVCDP+CLD   D LHCNYFGLGQICRGCG CS C PCPG TP P
Sbjct: 1303 LGADGAVDDDECS----VC-SNLTDEQVAVLASYDNGGKQVVCDPSCLDGVTDPLHCNYFGLGQICRGCGECSLCEPCPGATPAP 1382          
BLAST of mRNA_L-elsbetiae_contig1006.105.1 vs. uniprot
Match: A0A6H5KTW1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTW1_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.390e-20
Identity = 40/58 (68.97%), Postives = 49/58 (84.48%), Query Frame = 0
Query:   96 ELTDAQEEALANYDNGGKIVVCDPTCLDSDVDQLHCNYFGLGQICRGCGTCSDCRPCP 153
            +++ AQEEALA YD GGK++VCDPTCL  D+   HCNYFGLGQ+CRGCG+CS+C PCP
Sbjct:  322 DISPAQEEALAMYDGGGKVIVCDPTCLGGDIS--HCNYFGLGQLCRGCGSCSECVPCP 377          
BLAST of mRNA_L-elsbetiae_contig1006.105.1 vs. uniprot
Match: D7G4W7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4W7_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 2.650e-20
Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = 0
Query:   88 EADPVCDCELTDAQEEALANYDNGGKIVVCDPTCLDSDVDQLHCNYFGLGQICRGCGTCSDCRPCP 153
            EA+     +++ AQEEALA YD GGK++VCDPTCL  D+   HCNYFGLGQ+CRGCG+CS C PCP
Sbjct:  349 EAEIAMCADISPAQEEALAMYDGGGKVIVCDPTCLGEDIS--HCNYFGLGQLCRGCGSCSGCDPCP 412          
BLAST of mRNA_L-elsbetiae_contig1006.105.1 vs. uniprot
Match: A0A6H5L1V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V0_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 4.340e-19
Identity = 47/73 (64.38%), Postives = 50/73 (68.49%), Query Frame = 0
Query:   75 IGGDEPLDRDEDGEADPVCDCELTDAQEEALANYDNGGKIVVCDPTCLDSDVDQLHCNYFGLGQICRGCGTCS 147
            +G D  +D DE      VC   LTD Q   LA+YDNGGK VVCDPTCLD   D LHCNYFGLGQICRGCG CS
Sbjct:    4 LGADGAVDDDECS----VC-SNLTDEQVAILASYDNGGKQVVCDPTCLDGVTDPLHCNYFGLGQICRGCGDCS 71          
BLAST of mRNA_L-elsbetiae_contig1006.105.1 vs. uniprot
Match: A0A6H5L314_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L314_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 2.710e-18
Identity = 47/73 (64.38%), Postives = 50/73 (68.49%), Query Frame = 0
Query:   75 IGGDEPLDRDEDGEADPVCDCELTDAQEEALANYDNGGKIVVCDPTCLDSDVDQLHCNYFGLGQICRGCGTCS 147
            +G D  +D DE      VC   LTD Q   LA+YDNGGK VVCDPTCLD   D LHCNYFGLGQICRGCG CS
Sbjct:  420 LGADGAVDDDECS----VC-SNLTDEQVAILASYDNGGKQVVCDPTCLDGVTDPLHCNYFGLGQICRGCGDCS 487          
BLAST of mRNA_L-elsbetiae_contig1006.105.1 vs. uniprot
Match: D8LI25_ECTSI (Mucin 17-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI25_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 1.510e-11
Identity = 43/86 (50.00%), Postives = 49/86 (56.98%), Query Frame = 0
Query:   74 DIGGDEPLDRDEDGE---ADPVCDC----ELTDAQEEALANYDNGGKIVVCDPTCLDSDVDQLHCNYFGLGQICRGCGTCSDCRPC 152
            D G D  +D D  G+   AD   DC     L++ Q  ALA +  G K VVCD  CLD  VD L C+YFGLGQICRGCG C  C  C
Sbjct: 1156 DAGVDVEVDMDAYGDGADADTTSDCAACSNLSEVQMLALAAHPGGAKRVVCDSDCLDG-VDVLDCDYFGLGQICRGCGDCDGCEAC 1240          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1006.105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FTU6_ECTSI4.670e-2463.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTW1_9PHAE1.390e-2068.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4W7_ECTSI2.650e-2063.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1V0_9PHAE4.340e-1964.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L314_9PHAE2.710e-1864.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI25_ECTSI1.510e-1150.00Mucin 17-like protein n=1 Tax=Ectocarpus siliculos... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 45..61
score: 40.0
coord: 1..8
score: 30.77
coord: 63..80
score: 27.78
coord: 152..177
score: 33.85
coord: 11..32
score: 43.64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1006contigL-elsbetiae_contig1006:13602..15448 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1006.105.1mRNA_L-elsbetiae_contig1006.105.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1006 13602..15448 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1006.105.1 ID=prot_L-elsbetiae_contig1006.105.1|Name=mRNA_L-elsbetiae_contig1006.105.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=203bp
VTPVTPAPVTPETPAPTTAVTPAPVTPGPVTPVTPAPVTPKTPAPTTAVN
PAPVTPAPVIPVTPAPTTAFEEPDIGGDEPLDRDEDGEADPVCDCELTDA
QEEALANYDNGGKIVVCDPTCLDSDVDQLHCNYFGLGQICRGCGTCSDCR
PCPGTTPTPTPEPATPEPVTPEPPTPEPATPEPATPEPATPEPATPEPVT
AEP
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