prot_L-elsbetiae_contig10.43.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10.43.1
Unique Nameprot_L-elsbetiae_contig10.43.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length361
Homology
BLAST of mRNA_L-elsbetiae_contig10.43.1 vs. uniprot
Match: PSBA_ECTSI (Photosystem II protein D1 n=1129 Tax=Eukaryota TaxID=2759 RepID=PSBA_ECTSI)

HSP 1 Score: 729 bits (1883), Expect = 4.800e-266
Identity = 357/360 (99.17%), Postives = 359/360 (99.72%), Query Frame = 0
Query:    1 MVATLERREEKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 360
            MVATLERREEKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAAS+EEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFL+YPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILM PFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG
Sbjct:    1 MVATLERREEKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASIEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMRPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 360          
BLAST of mRNA_L-elsbetiae_contig10.43.1 vs. uniprot
Match: A0A1N7TJI8_9PHAE (Photosystem II protein D1 n=412 Tax=Eukaryota TaxID=2759 RepID=A0A1N7TJI8_9PHAE)

HSP 1 Score: 725 bits (1871), Expect = 3.240e-264
Identity = 349/360 (96.94%), Postives = 358/360 (99.44%), Query Frame = 0
Query:    1 MVATLERREEKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 360
            MVATLERREEKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEA S+EEWLYNGGPYQL+VFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFL+YPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPV+ IWLT+LG+STMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNE+LPVA+SAPS+VG
Sbjct:    1 MVATLERREEKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEALSIEEWLYNGGPYQLVVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVIAIWLTSLGISTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEVLPVAVSAPSIVG 360          
BLAST of mRNA_L-elsbetiae_contig10.43.1 vs. uniprot
Match: PSBA_PHATC (Photosystem II protein D1 n=590 Tax=root TaxID=1 RepID=PSBA_PHATC)

HSP 1 Score: 676 bits (1743), Expect = 1.050e-244
Identity = 328/360 (91.11%), Postives = 342/360 (95.00%), Query Frame = 0
Query:    1 MVATLERREEKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 360
            M ATLERR+    W  F  WITSTENRLYIGWFGCLM PTLLTA SCYIIAFIAAPPVDIDGIREPVAGSLLYGNNII+GAVIPSSNAIGIHFYPIWEAASV+EWLYNGGPYQLIV HFL+GVA +MGREWELSYRLGMRPWIFVAFSAPVAAASAVFL+YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET+E ES NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPVVGIWLTA+GVSTMAFNLNGFNFNQSVVDS+GRVINTWADIINRADLGMEVMHERNAHNFPLDLAS E+LPVA++AP+V G
Sbjct:    1 MTATLERRQSVSLWERFCGWITSTENRLYIGWFGCLMFPTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIITGAVIPSSNAIGIHFYPIWEAASVDEWLYNGGPYQLIVLHFLLGVASYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTENESTNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVVGIWLTAMGVSTMAFNLNGFNFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLASGEVLPVALTAPAVNG 360          
BLAST of mRNA_L-elsbetiae_contig10.43.1 vs. uniprot
Match: A0A451FLR3_9STRA (Photosystem II protein D1 n=179 Tax=Eukaryota TaxID=2759 RepID=A0A451FLR3_9STRA)

HSP 1 Score: 665 bits (1717), Expect = 9.620e-241
Identity = 319/358 (89.11%), Postives = 339/358 (94.69%), Query Frame = 0
Query:    1 MVATLERREEKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSV 358
            M ATLERRE    W  F +WITSTENRLYIGWFG LMIP LLTA SC+II FIAAPPVDIDGIREPVAGSLLYGNNIISGA++PSSNAIGIHFYPIWEAAS++EWLYNGGPYQLIVFHFL+GVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFL+YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET +  S NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPVVGIWLTALG+STMAFNLNGFNFNQSVVDS+GRVINTWADI+NRA+LG+EVMHERNAHNFPLDLA + +LPVA++AP+V
Sbjct:    1 MTATLERREGTSLWERFCSWITSTENRLYIGWFGVLMIPLLLTATSCFIIGFIAAPPVDIDGIREPVAGSLLYGNNIISGAIVPSSNAIGIHFYPIWEAASLDEWLYNGGPYQLIVFHFLLGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETEDGVSANYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAIWPVVGIWLTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGIEVMHERNAHNFPLDLAVSNVLPVALNAPAV 358          
BLAST of mRNA_L-elsbetiae_contig10.43.1 vs. uniprot
Match: A0A023JEK8_9STRA (Photosystem II protein D1 n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A023JEK8_9STRA)

HSP 1 Score: 665 bits (1716), Expect = 1.370e-240
Identity = 321/360 (89.17%), Postives = 339/360 (94.17%), Query Frame = 0
Query:    1 MVATLERREEKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 360
            M ATLERRE    W  F  WITSTENRLYIGWFGC+M PTLLTA SCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAV+PSSNAIGIH YPIWEAAS++EWLYNGGPYQLIV HF IGV  +MGREWELSYRLGMRPWIFVAFSAPVAAA+AVF++YPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET+E ES ++GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPVVGIWLTA+G+STMAFNLNGFNFNQSVVDS+GRVINTWADIINRADLGMEVMHERNAHNFPLDLAS E+LPVA++AP+V G
Sbjct:    1 MTATLERRESVSLWERFCGWITSTENRLYIGWFGCVMFPTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGIHLYPIWEAASIDEWLYNGGPYQLIVLHFFIGVCTYMGREWELSYRLGMRPWIFVAFSAPVAAAAAVFVVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTENESPDFGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVVGIWLTAMGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLASGEVLPVALTAPAVNG 360          
BLAST of mRNA_L-elsbetiae_contig10.43.1 vs. uniprot
Match: A0A7S2RD40_9STRA (Photosystem II protein D1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RD40_9STRA)

HSP 1 Score: 662 bits (1708), Expect = 3.540e-239
Identity = 318/360 (88.33%), Postives = 340/360 (94.44%), Query Frame = 0
Query:    1 MVATLERREEKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 360
            M ATLERRE    W  F +WITSTENRLYIGWFG +MIPTLLTA SC+II FIAAPPVDIDGIREPVAGSL+YGNNIISGAVIPSSNAIG+HFYPIWEAASV+EWLYNGGPYQLIV HFL+GVA +MGREWELSYRLGMRPWIFVAFSAPVAAASAVFL+YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET++ ES N GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPV+GIW+TA+G+STMAFNLNGFNFNQSVVDSEGRVINTWADI+NRADLG+EVMHERNAHNFPLDLA+ E+ PVA+SAP+V G
Sbjct:   13 MTATLERRESISLWERFCSWITSTENRLYIGWFGVVMIPTLLTATSCFIIGFIAAPPVDIDGIREPVAGSLMYGNNIISGAVIPSSNAIGVHFYPIWEAASVDEWLYNGGPYQLIVLHFLLGVASYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTDSESTNNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVLGIWITAMGISTMAFNLNGFNFNQSVVDSEGRVINTWADILNRADLGIEVMHERNAHNFPLDLAAGEVFPVAVSAPAVNG 372          
BLAST of mRNA_L-elsbetiae_contig10.43.1 vs. uniprot
Match: PSBA_TRIAZ (Photosystem II protein D1 n=457 Tax=root TaxID=1 RepID=PSBA_TRIAZ)

HSP 1 Score: 650 bits (1678), Expect = 8.440e-235
Identity = 305/360 (84.72%), Postives = 337/360 (93.61%), Query Frame = 0
Query:    1 MVATLERREEKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 360
            M  TL++R     W  F  WITSTENR+YIGWFG LMIPTL++A +C++IAFIAAPPVDIDGIREPVAGSLLYGNNIISGAV+PSSNAIG+HFYPIWEAAS++EWLYNGGPYQL++FHFLIGVAC++GREWELSYRLGMRPWI VAFSAPVAAA+AVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHM GVAGVFGGSLFSAMHGSLVTSSL+RET+E ES NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLAAWPV+GIW TALGVSTMAFNLNGFNFNQS++DS+GRVI TWAD+INRA+LGMEVMHERNAHNFPLDLA+ ++ PVA++AP + G
Sbjct:    1 MTTTLQQRSTANVWDRFCEWITSTENRIYIGWFGVLMIPTLVSAIACFVIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFLIGVACYLGREWELSYRLGMRPWICVAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTETESQNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGVSTMAFNLNGFNFNQSIIDSQGRVIGTWADVINRANLGMEVMHERNAHNFPLDLAAGDVAPVALTAPPING 360          
BLAST of mRNA_L-elsbetiae_contig10.43.1 vs. uniprot
Match: A0A5P8VR66_9NOSO (Photosystem II protein D1 n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A5P8VR66_9NOSO)

HSP 1 Score: 647 bits (1669), Expect = 1.980e-233
Identity = 301/360 (83.61%), Postives = 335/360 (93.06%), Query Frame = 0
Query:    1 MVATLERREEKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 360
            M  TL+RRE    W  F  WITST NR+YIGWFG +MIPTLL A +C++IAFIAAPPVDIDGIREPVAGSL+YGNNIISGAV+PSSNAIG+HFYPIWEAAS++EWLYNGGPYQL++FHFLIGV C++GREWELSYRLGMRPWI +A+SAPVAAASAVFL+YPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFH  GVAGVFGGSLFSAMHGSLVTSSL+RET+E ES NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLAAWPV+GIW TALGVSTMAFNLNGFNFNQS++DS GRVI+TWAD+INRA+LGMEVMHERNAHNFPLDLA+ ++ PVA++AP++ G
Sbjct:    1 MTTTLQRRESANVWDRFCEWITSTNNRIYIGWFGVVMIPTLLAATACFVIAFIAAPPVDIDGIREPVAGSLIYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFLIGVFCYLGREWELSYRLGMRPWIAIAYSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLVRETTETESQNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGVSTMAFNLNGFNFNQSIIDSSGRVISTWADVINRANLGMEVMHERNAHNFPLDLAAGDVAPVALTAPAING 360          
BLAST of mRNA_L-elsbetiae_contig10.43.1 vs. uniprot
Match: A0A1E2WTZ6_9NOSO (Photosystem II protein D1 n=33 Tax=cellular organisms TaxID=131567 RepID=A0A1E2WTZ6_9NOSO)

HSP 1 Score: 646 bits (1667), Expect = 4.000e-233
Identity = 303/360 (84.17%), Postives = 334/360 (92.78%), Query Frame = 0
Query:    1 MVATLERREEKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 360
            M  TL+RRE    W  F  WITST NR+YIGWFG +MIPTLL A +C++IAFIAAPPVDIDGIREPVAGSL+YGNNIISGAV+PSSNAIG+HFYPIWEAAS++EWLYNGGPYQL+VFHFLIGV C+MGREWELSYRLGMRPWI +A+SAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFH  GVAGVFGGSLFSAMHGSLVTSSL+RET+E ES NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLAAWPV+GIW TALGVSTMAFNLNGFNFNQS++DSEGRVI TWAD+INRA+LGMEVMHERNAHNFPLDLA+ +  PVA++AP++ G
Sbjct:    1 MTTTLQRRESANVWDRFCEWITSTNNRIYIGWFGVVMIPTLLAATACFVIAFIAAPPVDIDGIREPVAGSLIYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVVFHFLIGVFCYMGREWELSYRLGMRPWIAIAYSAPVAAATAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLVRETTETESQNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGVSTMAFNLNGFNFNQSIIDSEGRVIATWADVINRANLGMEVMHERNAHNFPLDLAAGDSAPVALTAPAING 360          
BLAST of mRNA_L-elsbetiae_contig10.43.1 vs. uniprot
Match: PSBA_CYAM1 (Photosystem II protein D1 n=18 Tax=Eukaryota TaxID=2759 RepID=PSBA_CYAM1)

HSP 1 Score: 646 bits (1667), Expect = 4.000e-233
Identity = 311/358 (86.87%), Postives = 335/358 (93.58%), Query Frame = 0
Query:    1 MVATLERREEKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSV 358
            M ATL+RR     W  F  WITSTENRLYIGWFG LMIP LLTA   +IIAF+AAPPVDIDGIREPV+GSL YGNNII+GAV+P+SNAIG+HFYPIWEAASV+EWLYNGGPYQLIV HFLIGVA +MGREWELSYRLGMRPWI VAFSAPVAAA+AVFLIYPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGG+LFSAMHGSLVTSSLIRETSE ES+N GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFL AWPVVGIWLTA+G+STMAFNLNGFNFNQSVVDSEGRVINTWADI+NRA+LG+EVMHERNAHNFPLDLASN ++PVA++APSV
Sbjct:    1 MTATLQRRASANLWERFCAWITSTENRLYIGWFGVLMIPCLLTATCVFIIAFVAAPPVDIDGIREPVSGSLFYGNNIITGAVVPTSNAIGLHFYPIWEAASVDEWLYNGGPYQLIVLHFLIGVASYMGREWELSYRLGMRPWICVAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGALFSAMHGSLVTSSLIRETSENESLNNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVVGIWLTAIGISTMAFNLNGFNFNQSVVDSEGRVINTWADILNRANLGIEVMHERNAHNFPLDLASNSVVPVALTAPSV 358          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10.43.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
PSBA_ECTSI4.800e-26699.17Photosystem II protein D1 n=1129 Tax=Eukaryota Tax... [more]
A0A1N7TJI8_9PHAE3.240e-26496.94Photosystem II protein D1 n=412 Tax=Eukaryota TaxI... [more]
PSBA_PHATC1.050e-24491.11Photosystem II protein D1 n=590 Tax=root TaxID=1 R... [more]
A0A451FLR3_9STRA9.620e-24189.11Photosystem II protein D1 n=179 Tax=Eukaryota TaxI... [more]
A0A023JEK8_9STRA1.370e-24089.17Photosystem II protein D1 n=4 Tax=Bacillariophyta ... [more]
A0A7S2RD40_9STRA3.540e-23988.33Photosystem II protein D1 n=1 Tax=Rhizochromulina ... [more]
PSBA_TRIAZ8.440e-23584.72Photosystem II protein D1 n=457 Tax=root TaxID=1 R... [more]
A0A5P8VR66_9NOSO1.980e-23383.61Photosystem II protein D1 n=6 Tax=Cyanobacteria Ta... [more]
A0A1E2WTZ6_9NOSO4.000e-23384.17Photosystem II protein D1 n=33 Tax=cellular organi... [more]
PSBA_CYAM14.000e-23386.87Photosystem II protein D1 n=18 Tax=Eukaryota TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000484Photosynthetic reaction centre, L/MPRINTSPR00256REACTNCENTREcoord: 109..137
score: 27.75
coord: 197..223
score: 35.45
IPR000484Photosynthetic reaction centre, L/MPFAMPF00124Photo_RCcoord: 28..319
e-value: 3.3E-94
score: 314.9
IPR000484Photosynthetic reaction centre, L/MPANTHERPTHR33149FAMILY NOT NAMEDcoord: 1..353
IPR000484Photosynthetic reaction centre, L/MPROSITEPS00244REACTION_CENTERcoord: 191..217
IPR036854Photosystem II protein D1/D2 superfamilyGENE3D1.20.85.10coord: 142..296
e-value: 2.3E-24
score: 88.0
IPR036854Photosystem II protein D1/D2 superfamilySUPERFAMILY81483Bacterial photosystem II reaction centre, L and M subunitscoord: 14..343
IPR005867Photosystem II protein D1TIGRFAMTIGR01151TIGR01151coord: 1..360
e-value: 2.0E-234
score: 774.7
IPR005867Photosystem II protein D1HAMAPMF_01379PSII_PsbA_D1coord: 1..347
score: 58.306
NoneNo IPR availablePANTHERPTHR33149:SF11coord: 1..353
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..55
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..129
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..224
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 130..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 270..295
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 225..269
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 296..360
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 189..199
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..97
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 170..188
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 165..169
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 98..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..28
NoneNo IPR availableTMHMMTMhelixcoord: 141..163
NoneNo IPR availableTMHMMTMhelixcoord: 197..219
NoneNo IPR availableTMHMMTMhelixcoord: 270..292
NoneNo IPR availableTMHMMTMhelixcoord: 30..52
NoneNo IPR availableTMHMMTMhelixcoord: 109..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10contigL-elsbetiae_contig10:78064..79146 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10.43.1mRNA_L-elsbetiae_contig10.43.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10 77983..79220 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10.43.1 ID=prot_L-elsbetiae_contig10.43.1|Name=mRNA_L-elsbetiae_contig10.43.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=361bp
MVATLERREEKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYII
AFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAA
SVEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAP
VAAASAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMA
GVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVA
AHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGF
NFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILP
VAISAPSVVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000484Photo_RC_L/M
IPR036854Photo_II_D1/D2_sf
IPR005867PSII_D1