prot_L-elsbetiae_contig10.21.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig10.21.1
Unique Name	prot_L-elsbetiae_contig10.21.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	158

Homology

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BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Match: D1J794_ECTSI (ATP synthase subunit b, chloroplastic n=8 Tax=Ectocarpales TaxID=2877 RepID=D1J794_ECTSI)

HSP 1 Score: 266 bits (681), Expect = 1.380e-89
Identity = 142/157 (90.45%), Postives = 152/157 (96.82%), Query Frame = 0

Query:    1 MFDNYSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDTIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQKLYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQIMKKIMSS 157
            MFDNY+S+LIIGTEKTGGLFDFDGTLPVIALQF+IFMF+LNFILYTPLLDTIDERNIYISKSLSEAT IL KSNELNLKYEKKTSKARKAVALDLLTYQ+LYK+ILEEKMKSSE FIDKFLTETTKNFE+NKE ILKSFDTEIDSLSN+IMKK++ S
Sbjct:    1 MFDNYNSILIIGTEKTGGLFDFDGTLPVIALQFIIFMFLLNFILYTPLLDTIDERNIYISKSLSEATRILTKSNELNLKYEKKTSKARKAVALDLLTYQQLYKNILEEKMKSSEDFIDKFLTETTKNFEENKENILKSFDTEIDSLSNEIMKKMIKS 157

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BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Match: A0A1I9LVV6_9PHAE (ATP synthase subunit b, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVV6_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 2.860e-82
Identity = 132/156 (84.62%), Postives = 145/156 (92.95%), Query Frame = 0

Query:    1 MFDNYSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDTIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQKLYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQIMKKIMS 156
            MFDNY+ +LII TEKTGGLFDFDGTLPVIA+QF+IFMF+LNFILYTPLLDTIDERNIYISKSLSEAT+IL K+N+LN+KYEKKTSKARKAVALDLL YQKLYKDILEEKMKSSE  IDKFL ETTKNFE+NK  ILKSFDTEI SLS QIMKK+++
Sbjct:    1 MFDNYNYILIISTEKTGGLFDFDGTLPVIAIQFIIFMFILNFILYTPLLDTIDERNIYISKSLSEATNILTKANKLNIKYEKKTSKARKAVALDLLIYQKLYKDILEEKMKSSESVIDKFLIETTKNFEENKGNILKSFDTEIYSLSKQIMKKLIT 156

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BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Match: A0A0S0GJT6_COSCS (ATP synthase CF0 B' chain subunit II n=27 Tax=Laminariales TaxID=2886 RepID=A0A0S0GJT6_COSCS)

HSP 1 Score: 245 bits (625), Expect = 4.570e-81
Identity = 127/156 (81.41%), Postives = 145/156 (92.95%), Query Frame = 0

Query:    1 MFDNYSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDTIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQKLYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQIMKKIMS 156
            MF NY+S+LIIGTEKTGGLFDFDGTLP+IALQFVIFMF+LNFILYTPLLDTIDERN+YI KSL EATS+L KSN+LN+KYE KTSKARKA  LDLLTYQKLYKDILEEKMKSS++FIDKFL ETT+NFE+NK++IL SFD EIDSLS+QIM K+++
Sbjct:    1 MFYNYNSILIIGTEKTGGLFDFDGTLPIIALQFVIFMFILNFILYTPLLDTIDERNLYIKKSLDEATSVLTKSNQLNVKYEAKTSKARKAAKLDLLTYQKLYKDILEEKMKSSQLFIDKFLIETTENFENNKDSILTSFDNEIDSLSSQIMTKLLT 156

[Close]

BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Match: A0A8F0F9X4_9PHAE (CF0 subunit II n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9X4_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 4.370e-79
Identity = 124/156 (79.49%), Postives = 140/156 (89.74%), Query Frame = 0

Query:    1 MFDNYSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDTIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQKLYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQIMKKIMS 156
            MF NY+S+LIIGTEKTGGLFDFDGTLPVI  QFV+FMF+LNF+LYTPLLDTIDERN YI KSL +ATS+L KSNELN KYEKKTSKARKA  +D+L YQKLYKDILEEKMKSS++FIDKFL ETT+NFE+NK+ IL SFD EIDSLSNQIM KI++
Sbjct:    1 MFHNYNSILIIGTEKTGGLFDFDGTLPVIVFQFVLFMFILNFVLYTPLLDTIDERNSYIKKSLDKATSVLIKSNELNKKYEKKTSKARKAAKMDILIYQKLYKDILEEKMKSSQIFIDKFLVETTENFENNKDNILTSFDNEIDSLSNQIMTKIVT 156

[Close]

BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Match: A0A8F0FAP4_9PHAE (CF0 subunit II n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAP4_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 6.210e-79
Identity = 124/156 (79.49%), Postives = 143/156 (91.67%), Query Frame = 0

Query:    1 MFDNYSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDTIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQKLYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQIMKKIMS 156
            MF NY+S+LIIGTEKTGGLFDFDGTLPVIA+QFV+FMF+LNFILYTPLLDTIDERNIYI  SL EAT++LAKSN+LN KYEKK SKARKA  LDL+TYQKLYKDIL+EKMKSS++FID FL ETTKNFE+NK+ IL SFD+EIDSLS+QI+ KI++
Sbjct:    1 MFYNYNSILIIGTEKTGGLFDFDGTLPVIAIQFVLFMFILNFILYTPLLDTIDERNIYIKTSLEEATNVLAKSNQLNTKYEKKASKARKAAKLDLITYQKLYKDILDEKMKSSQIFIDDFLVETTKNFENNKDNILVSFDSEIDSLSSQIITKILT 156

[Close]

BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Match: D1GJH9_FUCVE (ATP synthase CF0 B' chain subunit II n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJH9_FUCVE)

HSP 1 Score: 219 bits (558), Expect = 7.340e-71
Identity = 114/156 (73.08%), Postives = 133/156 (85.26%), Query Frame = 0

Query:    1 MFDNYSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDTIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQKLYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQIMKKIMS 156
            MF +Y+S+ I+ TEKTGGLFDFDGTLPVI LQF+ FMF+LNFILY PLLDTIDERNIYI KSL EAT++L  +N+LN+KYE K SKARKA  LDLLTYQ LYKDILEEKMKSS++F D+FL ETT NFE NK+ IL SFD EIDSL++QIM KI++
Sbjct:    1 MFYHYNSIFILVTEKTGGLFDFDGTLPVIGLQFIFFMFILNFILYNPLLDTIDERNIYIKKSLDEATNVLTNANQLNVKYENKASKARKAAKLDLLTYQNLYKDILEEKMKSSQIFTDEFLNETTANFEINKDEILGSFDKEIDSLTSQIMNKILT 156

[Close]

BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Match: A0A1L2F1S8_9PHAE (AtpG n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A1L2F1S8_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 2.440e-69
Identity = 115/156 (73.72%), Postives = 131/156 (83.97%), Query Frame = 0

Query:    1 MFDNYSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDTIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQKLYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQIMKKIMS 156
            MF NYSS+LII TEKTGGLFDFDGTLPVI+LQF+IFMF+LN ILY PLLDTID RN YI KSL EA  IL  +N+LN K+E+K SKARKA  LDL+ YQ LYKDILEEKMKSS++FID FLTETT+NFE NK+ IL  FD EIDSL++QIM KI+S
Sbjct:    1 MFYNYSSILIIVTEKTGGLFDFDGTLPVISLQFIIFMFILNSILYNPLLDTIDARNTYIKKSLDEAAKILTNANQLNEKFEEKASKARKAAKLDLVIYQNLYKDILEEKMKSSQIFIDDFLTETTENFESNKDEILIGFDNEIDSLTSQIMTKILS 156

[Close]

BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Match: A0A8F0F723_9PHAE (CF0 subunit II n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F723_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 1.150e-60
Identity = 103/152 (67.76%), Postives = 124/152 (81.58%), Query Frame = 0

Query:    4 NYSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDTIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQKLYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQIMKKIM 155
            N++S+L+IGTEK GGLFDFDGTLP+IALQFVI MF+LNFILYTPLLD ID RNIY+ + L  A+ +L  S  LN +YEKKTS+ARKA  LDL+ YQKL K+ILEEK+K+S+  IDKFL E T NFE NKE+IL SF+ EI+SLS QIM KI+
Sbjct:    4 NFNSILLIGTEKPGGLFDFDGTLPIIALQFVILMFLLNFILYTPLLDYIDGRNIYVDECLKAASFLLKNSKALNAEYEKKTSQARKAAKLDLVIYQKLSKEILEEKVKTSQASIDKFLNEMTNNFEQNKESILTSFENEIESLSGQIMSKIL 155

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BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Match: A0A8E5XRC8_9PHAE (ATP synthase CF0 beta' subunit n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRC8_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 1.210e-58
Identity = 99/152 (65.13%), Postives = 123/152 (80.92%), Query Frame = 0

Query:    5 YSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDTIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQKLYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQIMKKIMS 156
            Y  VL++ TEKTGGLFDFDGTLPVI LQF+  MFVLN +LY PLL+TID RN YI +SL +A++ L ++N+LNLKYE K ++ARKA  +D++TYQKLYKDIL+ +M+SS+  ID F+ ETTKNF+DNKE IL S D EIDSLSNQI  KI+S
Sbjct:   19 YDFVLMLATEKTGGLFDFDGTLPVIVLQFLGLMFVLNSMLYAPLLETIDTRNFYIRRSLEKASTFLTEANQLNLKYENKATRARKAAKIDIVTYQKLYKDILDNEMRSSQNSIDDFVAETTKNFDDNKEKILASLDNEIDSLSNQITTKILS 170

[Close]

BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Match: A0A2I4Q2L6_9PHAE (ATP synthase CF0 B' chain subunit II n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2L6_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 4.730e-55
Identity = 94/153 (61.44%), Postives = 124/153 (81.05%), Query Frame = 0

Query:    4 NYSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLDTIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQKLYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQIMKKIMS 156
            N++++ +I TEKTGGLFDFDGTL VI  QF++ M +L  +LY PLLD +DER  Y+ +SL EA++ILA+SN LN KYEKKTS+ARK V LDLL YQKLYKD+L++KMKS + FID+FL  T KN E +KE ILKSFDT+I+SL+N++M K+++
Sbjct:    3 NFNTLFLITTEKTGGLFDFDGTLIVIVFQFILLMVILPSLLYNPLLDIMDERMTYMEESLEEASTILAESNRLNSKYEKKTSRARKVVELDLLMYQKLYKDLLDDKMKSLQFFIDEFLMVTIKNSETSKEIILKSFDTQIESLTNEMMVKLLA 155

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig10.21.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D1J794_ECTSI	1.380e-89	90.45	ATP synthase subunit b, chloroplastic n=8 Tax=Ecto...	[more]
A0A1I9LVV6_9PHAE	2.860e-82	84.62	ATP synthase subunit b, chloroplastic n=1 Tax=Pleu...	[more]
A0A0S0GJT6_COSCS	4.570e-81	81.41	ATP synthase CF0 B' chain subunit II n=27 Tax=Lami...	[more]
A0A8F0F9X4_9PHAE	4.370e-79	79.49	CF0 subunit II n=1 Tax=Chorda asiatica TaxID=12815...	[more]
A0A8F0FAP4_9PHAE	6.210e-79	79.49	CF0 subunit II n=1 Tax=Desmarestia aculeata TaxID=...	[more]
D1GJH9_FUCVE	7.340e-71	73.08	ATP synthase CF0 B' chain subunit II n=3 Tax=Fucac...	[more]
A0A1L2F1S8_9PHAE	2.440e-69	73.72	AtpG n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A1L2...	[more]
A0A8F0F723_9PHAE	1.150e-60	67.76	CF0 subunit II n=1 Tax=Protohalopteris sp. TaxID=2...	[more]
A0A8E5XRC8_9PHAE	1.210e-58	65.13	ATP synthase CF0 beta' subunit n=1 Tax=Ishige okam...	[more]
A0A2I4Q2L6_9PHAE	4.730e-55	61.44	ATP synthase CF0 B' chain subunit II n=1 Tax=Dicty...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002146	ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast	PFAM	PF00430	ATP-synt_B	coord: 25..155 e-value: 1.8E-12 score: 47.5
IPR002146	ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast	HAMAP	MF_01398	ATP_synth_b_bprime	coord: 20..157 score: 9.535
None	No IPR available	PANTHER	PTHR33445	FAMILY NOT NAMED	coord: 16..155
None	No IPR available	PANTHER	PTHR33445:SF2		coord: 16..155
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..28
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 29..49
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 50..157
None	No IPR available	TMHMM	TMhelix		coord: 27..49

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig10	contig	L-elsbetiae_contig10:41377..41850 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig10.21.1	mRNA_L-elsbetiae_contig10.21.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig10 41377..41850 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig10.21.1 ID=prot_L-elsbetiae_contig10.21.1|Name=mRNA_L-elsbetiae_contig10.21.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=158bp
MFDNYSSVLIIGTEKTGGLFDFDGTLPVIALQFVIFMFVLNFILYTPLLD
TIDERNIYISKSLSEATSILAKSNELNLKYEKKTSKARKAVALDLLTYQK
LYKDILEEKMKSSEVFIDKFLTETTKNFEDNKETILKSFDTEIDSLSNQI
MKKIMSS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002146	ATP_synth_b/b'su_bac/chlpt