mRNA_L-elsbetiae_contig9997.18917.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9997.18917.1
Unique NamemRNA_L-elsbetiae_contig9997.18917.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig9997.18917.1 vs. uniprot
Match: A0A6H5L9T2_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9T2_9PHAE)

HSP 1 Score: 548 bits (1411), Expect = 2.220e-189
Identity = 262/382 (68.59%), Postives = 303/382 (79.32%), Query Frame = 1 
Query:  331 SSSSKERIRNLDVRLEFIDEMAQEGAAIDNGELFAEPPLLAAPVPGEWVQRCANF-NKTDNFDHGAHCGGPLAEPCFERGRCDTGKGGAMLPKIYVYDQQCSLADSHQLPITDHSKDDKQNQHSYWREAVWKAGILADTYEEACLFIHVNTHNHDEPCATRAPMWNGGVNHVMMEFTPWWKEG-RGKSSISNTYAMDWAFDSLSCYYRSGFDLSLPLVPGKLFPGLESTSPTARKYFATFKGTLYLGGYGIEERSAVSRVHDPANRIVSVTQCSSMHGKQLLPENRDYCDRSQRRYDSYDYGDLMNTTFALVPSGRSPGTFRLGEIMSAGAIPVFVVRDWIKPFQEQIDWPSFSFTFSPDSVGAGMAEVLRAVSPDQLRVMQ 1470
            SSSS    R LDV + F +E ++     D+G LF EPP+L  P+  EWVQRC+N  N T  F  G+ CG PL +PCF+  RC +    +  P IYVYDQ+CSLADS++L I DH+  DKQ+Q SYWREAVW+AG+LA+TYEEACLFIHVNTHNHDEPCATRAP+WNGGVNH+MMEFTPWW +G R +  ISNTYAMDW+FD+LSCYYRSG+DLSLPLVPGK+FP    +    R YF TFKGTLYL GYG+EERSAVSRVHDPAN +VSV +CS+MHG + LPEN+DYC RS++RYD YDY  LMNTTFALVP+GRSPG+FRLGE+MSAGAIPVFVVRDWIKPFQEQIDWPSFSF FSPD VG  M E LRAV P QL  MQ
Sbjct:  118 SSSS----RKLDVTIGFSEETSRPLVEGDDGVLFDEPPVLRHPIKDEWVQRCSNLENATAAFAQGSVCGPPLTKPCFDHSRCGS---VSSRPMIYVYDQECSLADSNKLRINDHTNLDKQHQGSYWREAVWRAGLLANTYEEACLFIHVNTHNHDEPCATRAPLWNGGVNHIMMEFTPWWIKGQRARPHISNTYAMDWSFDALSCYYRSGYDLSLPLVPGKVFPDTAPSPAPDRDYFLTFKGTLYLRGYGLEERSAVSRVHDPANGVVSVIKCSNMHGDESLPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVQPAQLLEMQ 492
[Close]
BLAST of mRNA_L-elsbetiae_contig9997.18917.1 vs. uniprot
Match: D8LQY4_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY4_ECTSI)

HSP 1 Score: 304 bits (779), Expect = 2.600e-98
Identity = 141/188 (75.00%), Postives = 158/188 (84.04%), Query Frame = 1 
Query:  910 MDWAFDSLSCYYRSGFDLSLPLVPGKLFPGLESTSPTARKYFATFKGTLYLGGYGIEERSAVSRVHDPANRIVSVTQCSSMHGKQLLPENRDYCDRSQRRYDSYDYGDLMNTTFALVPSGRSPGTFRLGEIMSAGAIPVFVVRDWIKPFQEQIDWPSFSFTFSPDSVGAGMAEVLRAVSPDQLRVMQV 1473
            MDW+FD+LSCYYRSG+DLSLPLVPGK+FP    +    R YF TFKGTLYL GYG+EERSAVSR HDPAN +VSV +CS+MHG  +LPEN+DYC RS++RYD YDY  LMNTTFALVP+GRSPG+FRLGE+MSAGAIPVFVVRDWIKPFQEQIDWPSFSF FSPD VG  M E LRAV P +L  MQV
Sbjct:    1 MDWSFDALSCYYRSGYDLSLPLVPGKVFPDTAPSPAPDRDYFLTFKGTLYLRGYGLEERSAVSRAHDPANGVVSVIKCSNMHGDDILPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVEPARLLEMQV 188
[Close]
BLAST of mRNA_L-elsbetiae_contig9997.18917.1 vs. uniprot
Match: A0A6H5JRU9_9PHAE (GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRU9_9PHAE)

HSP 1 Score: 296 bits (757), Expect = 8.670e-91
Identity = 154/350 (44.00%), Postives = 208/350 (59.43%), Query Frame = 1 
Query:  442 PLLAAPVPGEWVQRCANFNKTDNFDHGA-----HCGGPLAEPCFERGRCDT-GKGGA-MLPKIYVYDQQCSLADSHQLPITDHSKDDKQNQHSYWREAVWKAGILADTYEEACLFIHVNTHNHDEPCATRAPMWNGGVNHVMMEFTPWWKEGRGKSSISNTYAMDWAFDSLSCYYRSGFDLSLPLVPGKLFPGLESTSPTARKYFATFKGTLYLGGYGIEERSAVSRVHDPANRIVSVTQCSSMHGKQLLPENRDYCDRSQRRYDSYDYGDLMNTTFALVPSGRSPGTFRLGEIMSAGAIPVFVVRDWIKPFQEQIDWPSFSFTFSPDSVGAGMAEVLRAVSPDQLRVMQ 1470
            P+  A  PG W       ++  + D  A      CG PLAEPCF+  RC     GGA   P IYV+D  CSLADS  LP ++ S       H+ WREA   AG+L++TY +ACLF+HVN   +  PC    P+WNGG NHVM++ T   ++   K  I+ + AMD + +  SC+YRSG+D ++PL     F  L   +P  R YF T KG LYL G G +ER +V  +H     ++    C  +H + LLPEN ++C         ++Y DLMNTTF LVP+GR P T+RL E+MSAGAIPVFV RD ++PF E++DWP+ SF+F P+ VG  M + LR+V+P +L  MQ
Sbjct:  158 PVDTAFAPG-WKGMPTRGSRCSSIDMAAVAPSMACGAPLAEPCFDHSRCRPHASGGAPSKPSIYVFDATCSLADSSALPPSNESL---MLSHT-WREAARDAGVLSETYRDACLFLHVNKRLNHVPCPAEKPLWNGGKNHVMVDLTDRTRDK--KPLIAGSAAMDASSNMRSCFYRSGYDFAVPLRHQWGFGNLTELAPWHRDYFLTVKGNLYLSGVGYDERMSVVPLHSEPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVTPAELLGMQ 500
[Close]
BLAST of mRNA_L-elsbetiae_contig9997.18917.1 vs. uniprot
Match: A0A6H5KKV6_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKV6_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 1.860e-86
Identity = 148/369 (40.11%), Postives = 210/369 (56.91%), Query Frame = 1 
Query:  397 QEGAAIDNGELFAEPPLLAAPVPGEWV-----QRCANFNKTDNFDHGAHCGGPLAEPCFERGRCDTGKGGAMLPKIYVYDQQCSLADSHQLPITDHSKD------DKQNQHSYWREAVWKAGILADTYEEACLFIHVNTHNHDEPCATRAPMWNGGVNHVMMEFTPWWKEGRGKSSISNTYAMDWAFDSLSCYYRSGFDLSLPLVPGKLFPGLESTSPTARKYFATFKGTLYLGGYGIEERSAVSRVHDPANRIVSVTQCSSMHGKQLLPENRDYCDRSQRRYDSYDYGDLMNTTFALVPSGRSPGTFRLGEIMSAGAIPVFVVRDWIKPFQEQIDWPSFSFTFSPDSVGAGMAEVLRAVSPDQLRVMQ 1470
            Q G  +  G L A PP LA      WV      RC++ +++  F  G  CG PL+ PCF+    +    G     IYV+D +CSL DS +L   D   +        Q+     R    + G+LADTY  AC+F+HV       PCA   P WN G NH++++ +   K    +  ++ ++AM+ A +  +C+YRSG+D+S+PL P ++   L + +P  R++F T K TLY+ G+G EER ++  + D  + +V    C   H + LLPEN ++C   + +Y+ YDY  LMN+TF LVP+GR P T+RLGE+MSAG IPVFV RD + PF EQIDWPS SF F+PD V + M + L AV   QL  MQ
Sbjct:   30 QHGRHLQTGSL-ASPPSLAVEGADPWVGRPQANRCSDLDQSV-FSTGMQCGPPLSPPCFQSYSTECLSNGG----IYVFDGECSLQDSSELLAADQGYEFSRTRVGDQDAAVTLRNETAQLGMLADTYASACMFVHVGK-GLKRPCAVNQPRWNNGANHLLVDMSD--KGRASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDREFFLTTKCTLYVSGHGSEERISLLPLQDEEHGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGTIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMKTLLAVPRAQLEEMQ 389
[Close]
BLAST of mRNA_L-elsbetiae_contig9997.18917.1 vs. uniprot
Match: A0A6H5JGQ8_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ8_9PHAE)

HSP 1 Score: 278 bits (711), Expect = 3.170e-85
Identity = 148/363 (40.77%), Postives = 212/363 (58.40%), Query Frame = 1 
Query:  424 ELFAEPPLLA-------APVPGEWVQRCANFNKTDNFDHGAHCGGPLAEPCFERGRCDT-GKGGAMLPKIYVYDQQCSLADSHQLPITDHSKDDKQN--QHSY--W--REAVWKAGILADTYEEACLFIHVNTHNHDEPCATRAPMWNGGVNHVMMEFTPWWKEGRGKSSISNTYAMDWAFDSLSCYYRSGFDLSLPLVPGKLFPGLESTSPTARKYFATFKGTLYLGGYGIEERSAVSRVHDPANRIVSVTQCSSMHGKQLLPENRDYCDRSQRRYDSYDYGDLMNTTFALVPSGRSPGTFRLGEIMSAGAIPVFVVRDWIKPFQEQIDWPSFSFTFSPDSVGAGMAEVLRAVSPDQLRVMQ 1470
            E    PP +A       A V      RC++ +++  F  G  CG PL+ PCF+    +  G  G     IYV+D +CSL ++ +L + D  +        H Y  W  R    + G+LA+TYE AC+ +HV+  +  +PCA   P WNGG NH++++ +   ++ R    ++ +YAM+ A +  +C+YRSG+D+S+PL P  +F  L    P  R +F T KG+LYL G+G  ER ++  + D AN ++    C  +H + LLPEN +YC     +YD + Y  LMNTTF LVP+GRSPGT+RLGE+MSAG+IPVFV  D + PF+E IDW SFSF F+PD V + M   LRAV   +L  MQ
Sbjct:   39 ETLESPPSVALDDDGAAAGVGHPETNRCSDLDQSA-FSIGMQCGPPLSPPCFQCNSTECLGNAG-----IYVFDSECSLLETSELRVPDEEQKVSWAWMDHHYVEWVLRNEAEQMGMLAETYESACILVHVSPGS-TKPCAVDQPRWNGGANHLLVDMSDKGRDSR--PDVAGSYAMEAATNMHTCFYRSGYDISVPLAPKHVFNDLADVDPWDRNFFLTTKGSLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEVHEEHLLPENVEYCRALSDQYDDHSYTSLMNTTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVPPFEELIDWSSFSFAFAPDQVESQMVRTLRAVPRAELEQMQ 392
[Close]
BLAST of mRNA_L-elsbetiae_contig9997.18917.1 vs. uniprot
Match: D7G4H1_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H1_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 7.940e-78
Identity = 132/295 (44.75%), Postives = 181/295 (61.36%), Query Frame = 1 
Query:  607 IYVYDQQCSLADSHQLPITDHSK--DDKQNQHSY--W--REAVWKAGILADTYEEACLFIHVNTHNHDEPCATRAPMWNGGVNHVMMEFTPWWKEGRGKSSI-SNTYAMDWAFDSLSCYYRSGFDLSLPLVPGKLFPGLESTSPTARKYFATFKGTLYLGGYGIEERSAVSRVHDPANRIVSVTQCSSMHGKQLLPENRDYCDRSQRRYDSYDYGDLMNTTFALVPSGRSPGTFRLGEIMSAGAIPVFVVRDWIKPFQEQIDWPSFSFTFSPDSVGAGMAEVLRAVSPDQLRVMQ 1470
            IYV+D +CSL ++ +L   D  K     +  H Y  W  R    + G+LA+TYE AC+ +HV+  +  +PCA   P W+GG NH++++ +     GRG   I + +YAM+ A +  +C+YRSGFD+S+PL   K F  L   +   R +F T KG+LYL  +G  ER ++  + D AN ++    C  +H + LLPEN +YC     RY  + Y  LMN+TF LVP+GRSPGTFRLGE+MSAG+IPVFV  D + PF+E IDW SFSF F+PD VG  M   LRAV   +L  MQ
Sbjct:    6 IYVFDSECSLLETSKLRAQDEGKKVSSTRMHHHYVEWVLRNEAEQMGMLAETYESACILVHVSPGS-TKPCAVDQPRWSGGANHLLVDMSD---NGRGSRPIVAGSYAMEAASNMQTCFYRSGFDISVPLHSKKAFNNLADVAAWDRNFFLTTKGSLYLSRHGSGERMSLVPLQDEANGVIMSLHCFELHNEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTFRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQ 296
[Close]
BLAST of mRNA_L-elsbetiae_contig9997.18917.1 vs. uniprot
Match: D8LNT2_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNT2_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 4.620e-63
Identity = 134/353 (37.96%), Postives = 187/353 (52.97%), Query Frame = 1 
Query:  529 CGGPLAEPCFERGRCDTGKGGAMLPKIYVYDQQCSLADSHQL-----PITDHSKDDKQNQHSYW-------REAVWKAGILADTYEEACLFIHVNTHNHDEPCATRAPMWNGGVNHVMMEFTPWWKEGRGKSSISNTYAMDWAFDSLSCYYRSGFDLSLPLVPGKLFPGLESTSPTARKYFATFKGTLYLGGYGIEERSAV--------SRVHDPANR------------------IVSVTQCSSMHGKQLLPENRDYCDRSQRRYDSY-DYGDLMNTTFALVPSGRSPGTFRLGEIMSAGAIPVFVVRDWIKPFQEQIDWPSFSFTFSPDSVGAGMAEVLRAVSPDQLRVMQ 1470
            CG P + PCF+  RC +G GG +L  +YV+D+ CS+  S ++      +      D   +   W       R A  + G+L DT +EAC+  +    +  E C ++ P W  G NH +++      E R   S  +  AM    +   CYYR G+D+++PL   +    L   +P  RKYFATFKG LYL G G+ ERSAV        S    PA                    ++ V +C + H +QLL  N+  C+ SQR YDS   YGDLMNTTFAL+P+GRSP T+RL E +SAGA+PVF+ +D++KPF  +I W  FSF+F P+ V   M + LRAV   +L  MQ
Sbjct:  208 CGSPWSAPCFDLSRCRSG-GGDLL-SVYVHDETCSMRTSSEIMASYGDVAIPPPWDAAAETQLWXXXXXTLRHAAAERGLLVDTPDEACIVFYAVPRDKGE-CVSKTPTWGEGQNHALLDLND---ESRAARSSLDGKAMFLQSNMRPCYYRHGYDIAMPLPARRPVERLREVAPQDRKYFATFKGKLYLSGNGLLERSAVLDLMSGGASAAAAPAEGRGEMGRANGDSQSSSSPDVLVVERCCNFHSEQLLSWNKAMCEASQREYDSSPSYGDLMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQDFVKPFPGKIPWSDFSFSFPPEEVPR-MLKTLRAVPDRELAQMQ 553
[Close]
BLAST of mRNA_L-elsbetiae_contig9997.18917.1 vs. uniprot
Match: D7G4H7_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H7_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 9.770e-60
Identity = 96/201 (47.76%), Postives = 135/201 (67.16%), Query Frame = 1 
Query:  877 RGKSS---ISNTYAMDWAFDSLSCYYRSGFDLSLPLVPGKLFPGLESTSPTARKYFATFKGTLYLGGYGIEERSAVSRVHDPANRIVSVTQCSSMHGKQLLPENRDYCDRSQRRYDSYDYGDLMNTTFALVPSGRSPGTFRLGEIMSAGAIPVFVVRDWIKPFQEQIDWPSFSFTFSPDSVGAGMAEVLRAVSPDQLRVMQ 1470
            +G++S   ++ ++AM+ A +  +C+YRSG+D+S+PL P ++   L + SP  R++F T K TLY+ G+G EER ++  + D  N +V    C   H + LLPEN ++C   + +Y+ YDY  LMN+TF LVP+GR P T+RLGE+MSAG+IPVFV RD + PF EQIDWPS SF F+PD V + M   L AV P QL  MQ
Sbjct:    4 KGRASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVSPLDREFFLTTKCTLYISGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPPAQLEEMQ 204
[Close]
BLAST of mRNA_L-elsbetiae_contig9997.18917.1 vs. uniprot
Match: D7G4H3_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H3_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 7.950e-56
Identity = 94/187 (50.27%), Postives = 121/187 (64.71%), Query Frame = 1 
Query:  910 MDWAFDSLSCYYRSGFDLSLPLVPGKLFPGLESTSPTARKYFATFKGTLYLGGYGIEERSAVSRVHDPANRIVSVTQCSSMHGKQLLPENRDYCDRSQRRYDSYDYGDLMNTTFALVPSGRSPGTFRLGEIMSAGAIPVFVVRDWIKPFQEQIDWPSFSFTFSPDSVGAGMAEVLRAVSPDQLRVMQ 1470
            M+ A +  +C+YRSGFD+S+PL   K F  L   +   R +F T KGTLYL G+G  ER ++  + D AN ++    C  +H + LLPEN +YC     RY  + Y  LMN+TF LVP+GRSPGT+RLGE+MSAG+IPVFV  D + PF+E IDW SFSF F+PD VG  M   LRAV   +L  MQ
Sbjct:    1 MEAASNMHTCFYRSGFDISVPLPSNKAFNNLADVAAWDRNFFLTTKGTLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEIHDEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQ 187
[Close]
BLAST of mRNA_L-elsbetiae_contig9997.18917.1 vs. uniprot
Match: A0A836CBB1_9STRA (Exostosin family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBB1_9STRA)

HSP 1 Score: 196 bits (498), Expect = 2.710e-54
Identity = 118/327 (36.09%), Postives = 168/327 (51.38%), Query Frame = 1 
Query:  523 AHCGGP---LAEPCFERGRCDTGKGGAMLPKIYVYDQQCSLADSHQLPITDHSKDDKQNQHSYWREAVWKAGILADTYEEACLFIHVNTH--NHDEPCATRAPMWNGGVNHVMMEFTPWWKEGRGKSSISNTYAMDWAFDSLSCY-YRSGFDLSLPLVPGKLFPGLESTSPTARKYFATFKGTLYLGGYGIE---ERSAVSRVHDPANRIVSVTQCSSMHGKQLLPENRDYCDRSQRRYDSYDYGDLMNTTFALVPSGRSPGTFRLGEIMSAGAIPVFVVRDWIKPFQEQIDWPSFSFTFSPDSVGAGMAEVLRAVSPDQLRVMQVG 1476
            A CGG    LA PCF+  RC +  G A    +YV+   CSL  S +L     +     + +  WR AV +AG L +T +EACL   V      + + C    P W  G+NHV+++ T      RG +  + +  + +A  +L+    R+G+D+++ L P   F  LE      R+Y  TF GT+Y      +   ER  +  +H PA+ +V V +CS + G     EN D C   +R YD+YDYGDL+NTTFALVP+GR P T+RL E MSAGAIPV    D+  PF    DW + +      +    +   +RAVS D+   M  G
Sbjct:   11 AACGGTDAQLAPPCFDPSRCLSANGTANFT-VYVHSPTCSLQPSSELLQRGQAGGSSHDWNRVWRSAVHRAGALVETPQEACLIAFVGDMYTRYTQQCVPLTPTWRRGLNHVLIDLTD---RARGVTYWTLSPRVAFAKSNLAASALRAGYDVAVALPPKGAFAHLEPAPAARRRYLLTFCGTVYPTRRWRQHGWERMHLLALHAPADGVVVVGRCSELRGDHARRENADRCAALRRDYDAYDYGDLLNTTFALVPAGRQPATYRLLEAMSAGAIPVVCADDYALPFPRLFDWDAIAIVLPALAAPEDVLAAVRAVSDDERERMHRG 333
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9997.18917.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L9T2_9PHAE2.220e-18968.59GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LQY4_ECTSI2.600e-9875.00Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A6H5JRU9_9PHAE8.670e-9144.00GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A6H5KKV6_9PHAE1.860e-8640.11GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JGQ8_9PHAE3.170e-8540.77GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G4H1_ECTSI7.940e-7844.75Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D8LNT2_ECTSI4.620e-6337.96Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D7G4H7_ECTSI9.770e-6047.76Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
D7G4H3_ECTSI7.950e-5650.27Glycosyltransferase, family GT47 n=1 Tax=Ectocarpu... [more]
A0A836CBB1_9STRA2.710e-5436.09Exostosin family-domain-containing protein n=1 Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9997contigL-elsbetiae_contig9997:211..6855 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score303.5
Seed ortholog evalue1.8e-79
Seed eggNOG ortholog2880.D8LQY4
Preferred nameEXTL1
KEGG koko:K02366,ko:K02368,ko:K21988
KEGG TC1.A.17.4
KEGG ReactionR05935,R05936,R10138,R10139
KEGG Pathwayko00534,ko01100,map00534,map01100
KEGG ModuleM00059
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000139,GO:0000271,GO:0000902,GO:0000904,GO:0001501,GO:0001503,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006040,GO:0006044,GO:0006082,GO:0006790,GO:0006807,GO:0006810,GO:0006897,GO:0006928,GO:0006935,GO:0006950,GO:0006986,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007492,GO:0007498,GO:0008150,GO:0008152,GO:0008194,GO:0008354,GO:0008375,GO:0008589,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010646,GO:0010647,GO:0012505,GO:0015012,GO:0015014,GO:0015020,GO:0016020,GO:0016021,GO:0016043,GO:0016051,GO:0016192,GO:0016477,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019899,GO:0019953,GO:0021537,GO:0021772,GO:0021988,GO:0022008,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030111,GO:0030154,GO:0030166,GO:0030176,GO:0030177,GO:0030182,GO:0030201,GO:0030202,GO:0030203,GO:0030210,GO:0030900,GO:0030968,GO:0031090,GO:0031175,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0033554,GO:0033692,GO:0034620,GO:0034637,GO:0034645,GO:0034976,GO:0035295,GO:0035966,GO:0035967,GO:0036465,GO:0036498,GO:0040011,GO:0042175,GO:0042221,GO:0042328,GO:0042330,GO:0042802,GO:0042803,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045880,GO:0046982,GO:0046983,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048513,GO:0048518,GO:0048522,GO:0048565,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048706,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050508,GO:0050509,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0055123,GO:0060322,GO:0060465,GO:0060828,GO:0061564,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071840,GO:0072498,GO:0090092,GO:0090097,GO:0090098,GO:0090100,GO:0090263,GO:0097485,GO:0098588,GO:0098657,GO:0098791,GO:0098827,GO:0099003,GO:0099504,GO:0120036,GO:0120039,GO:1901071,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903510
EggNOG free text desc.macromolecule glycosylation
EggNOG OGsKOG1021@1,KOG1021@2759
EC2.4.1.224,2.4.1.225
COG Functional cat.S
CAZyGT47,GT64
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko02000
Ec32 ortholog descriptionGlycosyltransferase, family GT47
Ec32 orthologEc-07_002110.1
Exons5
Model size1479
Cds size1479
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9997.18917.1prot_L-elsbetiae_contig9997.18917.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9997 211..6855 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817056.9927337-CDS-L-elsbetiae_contig9997:210..3901622817056.9927337-CDS-L-elsbetiae_contig9997:210..390Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9997 211..390 -
1691684014.442206-CDS-L-elsbetiae_contig9997:210..3901691684014.442206-CDS-L-elsbetiae_contig9997:210..390Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9997 211..390 -
1622817057.004312-CDS-L-elsbetiae_contig9997:1452..17041622817057.004312-CDS-L-elsbetiae_contig9997:1452..1704Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9997 1453..1704 -
1691684014.4570942-CDS-L-elsbetiae_contig9997:1452..17041691684014.4570942-CDS-L-elsbetiae_contig9997:1452..1704Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9997 1453..1704 -
1622817057.0167835-CDS-L-elsbetiae_contig9997:2191..23691622817057.0167835-CDS-L-elsbetiae_contig9997:2191..2369Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9997 2192..2369 -
1691684014.4695592-CDS-L-elsbetiae_contig9997:2191..23691691684014.4695592-CDS-L-elsbetiae_contig9997:2191..2369Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9997 2192..2369 -
1622817057.0312443-CDS-L-elsbetiae_contig9997:3059..33011622817057.0312443-CDS-L-elsbetiae_contig9997:3059..3301Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9997 3060..3301 -
1691684014.4821174-CDS-L-elsbetiae_contig9997:3059..33011691684014.4821174-CDS-L-elsbetiae_contig9997:3059..3301Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9997 3060..3301 -
1622817057.0438955-CDS-L-elsbetiae_contig9997:6228..68551622817057.0438955-CDS-L-elsbetiae_contig9997:6228..6855Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9997 6229..6855 -
1691684014.5017729-CDS-L-elsbetiae_contig9997:6228..68551691684014.5017729-CDS-L-elsbetiae_contig9997:6228..6855Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9997 6229..6855 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9997.18917.1

>prot_L-elsbetiae_contig9997.18917.1 ID=prot_L-elsbetiae_contig9997.18917.1|Name=mRNA_L-elsbetiae_contig9997.18917.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=493bp
CPATIPCHHIRYKNLGVDIIYVRCGLSGRVLQLFYLLRLPIMALFNRPKL
GQRAANLVLLLLLLLHGTTARPSTAADHGRDGLRTKESRRTGTTTLSISS
EGNGPAPRHRSSSSKERIRNLDVRLEFIDEMAQEGAAIDNGELFAEPPLL
AAPVPGEWVQRCANFNKTDNFDHGAHCGGPLAEPCFERGRCDTGKGGAML
PKIYVYDQQCSLADSHQLPITDHSKDDKQNQHSYWREAVWKAGILADTYE
EACLFIHVNTHNHDEPCATRAPMWNGGVNHVMMEFTPWWKEGRGKSSISN
TYAMDWAFDSLSCYYRSGFDLSLPLVPGKLFPGLESTSPTARKYFATFKG
TLYLGGYGIEERSAVSRVHDPANRIVSVTQCSSMHGKQLLPENRDYCDRS
QRRYDSYDYGDLMNTTFALVPSGRSPGTFRLGEIMSAGAIPVFVVRDWIK
PFQEQIDWPSFSFTFSPDSVGAGMAEVLRAVSPDQLRVMQVG*
back to top

mRNA from alignment at L-elsbetiae_contig9997:211..6855-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9997.18917.1 ID=mRNA_L-elsbetiae_contig9997.18917.1|Name=mRNA_L-elsbetiae_contig9997.18917.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6645bp|location=Sequence derived from alignment at L-elsbetiae_contig9997:211..6855- (Laminarionema elsbetiae ELsaHSoW15)
TGTCCAGCGACCATCCCGTGCCATCACATCCGTTACAAGAACCTGGGGGT
GGACATAATTTACGTCAGGTGTGGCCTCAGCGGGAGAGTCCTCCAACTCT
TTTATTTACTGCGTCTGCCCATTATGGCTCTTTTCAACCGCCCCAAGCTC
GGCCAACGGGCAGCGAATCTCGTGCTGCTGCTGCTGCTGCTGCTGCACGG
GACAACAGCTAGGCCATCGACTGCGGCTGATCACGGCAGAGACGGGCTTC
GAACGAAAGAATCGAGGAGGACTGGTACCACGACCCTCTCTATCTCGTCG
GAAGGAAATGGACCCGCGCCCAGGCACCGCAGCAGCAGTAGCAAGGAGCG
CATCAGGAACCTGGACGTGAGACTGGAGTTCATCGACGAGATGGCGCAAG
AAGGCGCGGCTATCGACAACGGAGAGCTCTTCGCCGAGCCGCCGCTGCTC
GCCGCTCCCGTCCCGGGTGAGTGGGTGCAGCGCTGCGCGAATTTCAACAA
GACCGACAACTTCGACCACGGCGCGCACTGCGGCGGGCCGCTCGCGGAGC
CTTGTTTCGAGCGGGGACGCTGCGACACTGGGAAAGGGGGTGCCATGTTG
CCGAAGATCTACGTCTACGACCAACAGGTGGGTTGGCGTTTGGGTGTGTG
CGGAGGGGACTGGAAGGCGCGCTCCTAGATATACCTGCAGTACACACATG
TAACACAGACTGCGAGCGTTTCAGCAACAACCTGGTTCTTCTTTTCGCGG
GGTAATCATGGTGGGCCAATTCTTGCGTGTGCGCCCGCAATACATGCCAT
CTCTAGGTTGTGATGGACGTGTAGATGGTTGCAGGTAGTAAGACTTGGTA
CAGGACTTGGCTAACGATCGACGCAAGCCAGCCATTTTCTTCGAGCTCGT
TCTGGCGACAAAAAAATACCCACGTCGACTATTTGTCACCAAACTGGAGA
TGGAAATCATCATCGTGAACGGTTTCTTGGCCGAAAAAAATGAGAAACAA
CGGTGCGCTCGGTTGCTCGGTTGGCGATTTGGATACAGCGAAGCAGTAGC
AGTATAGCGGCCACGCCGAGAGAGTTAGAGACTACCAGCACACTACATGG
GCACTCAGCTGTGGTTCTGGGTTTGACCTGACCCTCTGGAAAAGTGCAAT
GTCCTCGTCTCCACCTCGCGCTCTGAGTGCGATTATTTGTTTCAAGATAT
TGCAAGCTGCGAGCTGAGTTTTGGTTTTGTTTTCCAGAATTTAATACTGA
GCTCATCATAGCGTGACCCCGGCGGTGAAATAGACAGGGGTGTGGCCCAC
GTCGTGTCGCGCACGATATCATACATAGTAGTCAACCCCCCCTGCTGTCG
CGCACCTTATTATTTTCTTCCTCTTGAAAAGTTGACAGCAGGTGGGGGTT
GACTACTACTATTGTATGATTTCGTTTTTGGTGGACTAAGATAAACTGTA
TGGTATGTAGGTACCGACATCTCGATAAACTAATTATGTAGCTACAGACC
ATCCCTCTAAATAGGTACTACATGCTTGTAGATACAAGCCGGTTTCAAAA
AGGTGCGTAATAATTGAAAAGTACTGCTGTTGCTGATCAAAACACGTGCC
GAGGTCGAAAAACCGACAACCAGTAACACACCTGGTGGTCGTGAAGTACT
ATCTAGATTATGTACGTGTGTTGATATATGTTTGGCCGTGATGGATGTTA
ATCCAGAGATGTTCTGCGATCACCGAACACAAAAAGAACAGCGGTGGCGT
CTGCTATGATTAATCATTGTACATACATACGCGTGGTAGGAGTACATTGA
GATTATAGGATCATCGATCACACGGTAGTTCGTGCGGAATTTAGCGTAAT
AGGGATGTGAGTTACACTGCTGTGCTGCGGACGTCTCTTTAAATGCTGTC
AATCAATCTTATGTTTGTATCGCAACAAAGGTGCCAAGATTCTGACGCAT
GTGCGGAGACTCCGATCTCTGTGCGGAAATCGAACGGAATACATACTTTG
GTTCACCAAAAAATACAGCGCACATCCCTGTGTGATGACTCCGATCCGTG
CGATTATGATTAAAACCGGCAACACAGCGATTAGATATGTGAGCAGTGTG
AGACACTCAAAATAAAAAACCGGGACCACCACTTGCACGTGTGACCCCGG
TTGGGTCGTCTAGCTAGCGGTAGTGGAGGAAGGGGGCCAGCGGGCGGGCC
AGACGACAAATATGCCAATAATGGGAGGAAACAAATAAAGAAACGTGAGC
ACCGCTACGGCGCCCAAAGTATTTATGTAGGTGCAGTAGTGGATCCATAG
TATGGGGCCCGCAGTACTGTTTTTTTCGTGCAAAAATGCTGGACATCACC
CAACCTTACCGGAGGTATCGGGGTCTCATCCCTGTGCGGAGACCACGTGC
CCTGTTGTCGTGTTCACATTAATAATCGTTCCGATCTCTCTATCTATCTA
TCCAGTACCTCCACATGTCCGTACTGATACTAAAACACTTGATGCGGCCG
ATCTCCGTGGTCACAGGCAAACTTCCCTAACAGGGCAGATATATCTACTG
AAGAAATAAAAAGTGGGCCCGAAGGGTCAGCAACGCAAAAAACGTGTTAT
GCGTTGATAAAAACAAAAGATAAAGACACAGACATAGACTAGCCCCAGTC
TTGCGATAATACCATTTGGAACCCTGTGCGGAGACCCCGAACCGGGCGGA
GACTCCGAACCGTGTGGGGACTCCGAACCGTGCGGAGGCTTATTTTCGAT
GTTGAGCTGTCCACGGGCCTGTCTCGATGATGCATTACTACTACTTTTCG
TCGCACTCGAGGTACACATGATAAGTATTCCCGGGATCGATATTCAGCCA
ACGTTATTGTAGGATACTTAATTTTGCTGTTTTCACGGCGGTTTTGCTTT
CTCGTAAATCTTAAACGGATCTAGTCTACTTACGCACGCCGGTAGTCTTC
ATCCCGTGGCCAAATCGTGTTTTCCTGGTTTCTGGGCCAGCCATTGTTTT
TTTTGGCGGGGAGTGGGGTGGAAATTTCAGATGGGGTTGCGGAGTTTGCA
AATAAGAGTAATGCATCCTGTTTATGTATATGCTGAAACAACATCTGTCC
TCGCACAATTCTAATGTTCGATGTGGTTTGCAACATATTAGACCTTTCTT
GACGACGAGAGGTCGAACGTACGGCATGTAAATAGTACGTCTGTTCACGT
GATACCAACCATAAAACATGCATTTGGATGTGTGGTGATTTGAATTTCAG
GAGCTCGCCGAAACGAATGAAACGTCGCGACAGCAGCAATAGTTGGACGC
TGCTCTCAAGCATCCGTCGTCTCCAGGCGGTACCCTCTCTAGGCCCTAAT
AACGCACCATTCGAATGACAAAAAGTAAAATAATATTGTTGGAATCTCCG
TCTACGGCTGGAAGTACACGACGCGAGGTGATATTGTCATTCCAGGAACA
CTCACAAATACCCCTTGTGCTCGCAGCATCCATCAACCACTGCACCGTCC
ATCAAACAACCACTGCTGCATTTGTTCGTTCCGTCGCCACTTCGCCTCGA
TCAGTGCTCGCTAGCCGACAGCCACCAGCTGCCCATCACCGACCACAGCA
AGGACGACAAGCAGAACCAGCACTCCTACTGGAGGGAGGCGGTGTGGAAA
GCGGGCATTCTGGCCGACACCTACGAGGAGGCGTGCCTGTTCATCCACGT
CAACACCCACAACCACGACGAGCCCTGCGCGACGCGGGCGCCCATGTGGA
ACGGAGGCGTGAACCATGTGATGATGGAGTTCACCCCCTGGTGGAAGTGA
GTAAAAATCTCCCCGTCGCGGTGTAATTTAGTCGTCTTGGTGTAAGTTTT
TGGATTTTTCTGTCGGCAATACCACGCGTGGAGTCAAAGATGGTGGCAGC
ATACAGCCCCGGAACGAGTGCGCTCATGACAACCCTCTCTATCGAATCAA
GCGCGTGCGAGAGGAATGAATAGTCTATCTACATTAGTAGATATATCTAG
AGCTGCGTGCCGGTGTCCCAGCACTCCCAAATCGAGCGGGAAATATGTTC
TGTGAAGTCGACGGTGAGAGCTTTGATCGTGCTGGGGCGTTCCGAGCACA
CATTATTCTCTATCACAGAGGGAGGCAGGCTGCGTGAACATGGTCGCAGA
GCGGGACGCTCCCCCGTCTTGATTTTGGCGCCAACAAAAACAGAGAGGTC
CGGTCATGATAACAGTATCAACCCCTCTATGCACAACTCAATATTAACAA
GGCCGAGACTCGGACGCAGCACCCACAAAACCAGGGGCCTGGATCGCCGC
CTTTGAACAGCAGAGCATGTCAACCCTGCCCGCTGCCAGGTGCATACACC
AGACGAAGATGTTACGTGTGTAGTCTTATCTATCTGGATAGCACACACCT
GTGGAGCAGGGGGAGGGCTGGCAAGGGTTTTGTTGTTTGATATTCGTCAG
TTTTCTCCGCCGCGCGTGCGTGTGACTAACCCACAGAGAGGGGAGGGGTA
AAAGCAGCATCAGCAACACGTACGCCATGGACTGGGCGTTCGACTCCCTG
AGCTGCTACTACCGCAGCGGCTTCGATCTGTCGCTGCCGCTGGTCCCCGG
AAAGCTCTTCCCCGGGTTGGAGTCGACCTCTCCCACGGCTCGGAAGTACT
TCGCTACCTTCAAGGTTTGTTTTTGTGTGGCTGGCGTGCTTGCCGGCCGT
TCTCCAGTGGAAGCTCTCGGTTGTTCCGTTTCGTTTCGTTTCGTTTCGTA
GTCTTGCTTGTTTTTGGAGATGCGCGCTTGTTGCGTTTCATGGCATTCGA
CCAAGCTGAAACGGCGCTTATCATTATTTGGGATAATATGCATAGGACCC
CAGACCATGTCGGTGCTGCTGTCGTTGGTGCGTGTGCTGTCACTGGACCA
AGGCCAAGGGCCATACATGGCACCCGGCGCTGCTGGTGAGCGCCCGTGTT
AACGCAGCCATCCCGGGCTTCAGAACCCTATCCAAGCGCATTGTTGCGGT
ACATACGCGCGCGCTGCCTACCGATCGTGTTTCGCGAGCGCTACATGAAA
CGCTGAAAATCATATTTTATCGTGGTTGCCAATTGTATGAAGCAGTGGGC
ACCCTCCGTTTCCCTTTGGCGTCGCGTGCGTGCCTCGCTTACCGAGCACA
GGGCACGCTTTACCTCGGAGGGTACGGCATCGAGGAGCGGTCGGCCGTGT
CTCGAGTCCACGACCCTGCTAACCGCATCGTGTCGGTCACCCAGTGCTCG
AGCATGCACGGCAAGCAGCTCCTGCCCGAAAACCGAGACTACTGCGATCG
CTCTCAGCGGAGGTACGACTCCTACGACTACGGAGACCTGATGAACACCA
CTTTCGCGCTGGTTCCGTCCGGGCGATCGCCGGGAACGTTTCGGCTGGGG
GAGGTGAGCGGACCGGTTTTTGAGTTGCCACTATATGTTGTCGGTTCTCG
TTTTCCGTTCGCGTTGTATGGAGGACAGACATACAGGAGGTGGCCCCATA
TTCAAGTTGCCACTATATGGGGCCACCTACTGTACATATATAAATACAGT
TTTGTTTTGTTTTGTTTGGTTTTTCTTCACGTTTATTTCCAGTGCTCGAT
AAGCTCCTTGTCACGAGGGCATCTTAATCTTGCCAGAGTACGAACCGTGT
TCACACAGAAGAAGTGTTCCTTTCTCCGAGCCCCCCCCCCCCGCTCCCCC
CTTCTGCGGTGCTTGCCTGCCTGATATTTTTGTCGCGAGAAGGGTTCAGC
CGTCCCTTTTCCTCGTCGACGGTGAGGTCGGCGAAGTTTACATGCATGCA
TGCGTATCGTACAGAGATGTTGTTACAAGCAGTCTAACTAACGTGTGCGG
CGGAAAGGGGCTGGAGACCATTAGTCTAGCGTGCTCTGTCGCGATCCTCG
CTTAGCGAGGGGTGTGGTTTGATCCACTCCTGCAGCATGCGTGCCGCGGC
GGAAGAAGTGAAAAGAGGGCGTACGCACGTACATACACACATCCATAAAT
AATAACACACGCGGTGACGGACCGCCGGGCCGTGTCTGAACCCCGAAACA
AACGAGAGCCAAGCCAAGAATAAAACTCCATCAACTTGAAACGCTTGGAA
ATGCTAACTAAAAATGCGGGTGCGACCCGACCCGACTCGTAATGTTTGGG
CGGTTCGGCAGCGGGCGGGGTGGCGCCGCGGGGGGCGACCGGCCGCACAC
ATACGCGCCCGATCGCGACCGGGACCAAGCTGTTTGTTGCACGTGGGAGA
ACGCGGCTCTTGTATGGGTATACACGGCTCCGGAGAGTTGTTTTCAGCCG
TGGCCAAGATGACGCCGGTCCGGCGGGTCCAGCAAAAACATAAAACCTCG
CCCGTTTTAGAACGAATCCCGACCGCAACTAAATAACGACAGTACAGTAC
CGATATATGTAGTGTACTGATGTCATGCAATTTACCTGTGGTACATTTTT
TTTGTTTTTGCGCAGATCATGAGCGCCGGCGCTATCCCCGTGTTCGTCGT
GAGGGACTGGATAAAGCCGTTCCAGGAGCAGATCGACTGGCCGTCGTTCT
CCTTCACCTTTTCTCCGGACAGCGTGGGCGCTGGGATGGCGGAGGTGCTG
AGGGCCGTATCGCCAGACCAGCTCAGGGTGATGCAGGTGGGATAA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig9997:211..6855-

>mRNA_L-elsbetiae_contig9997.18917.1 ID=mRNA_L-elsbetiae_contig9997.18917.1|Name=mRNA_L-elsbetiae_contig9997.18917.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2958bp|location=Sequence derived from alignment at L-elsbetiae_contig9997:211..6855- (Laminarionema elsbetiae ELsaHSoW15)
TGTCCAGCGACCATCCCGTGCCATCACATCCGTTACAAGAACCTGGGGGT
GGACATAATTTACGTCAGGTGTGGCCTCAGCGGGAGAGTCCTCCAACTCT
TTTATTTACTGCGTCTGCCCATTATGGCTCTTTTCAACCGCCCCAAGCTC
GGCCAACGGGCAGCGAATCTCGTGCTGCTGCTGCTGCTGCTGCTGCACGG
GACAACAGCTAGGCCATCGACTGCGGCTGATCACGGCAGAGACGGGCTTC
GAACGAAAGAATCGAGGAGGACTGGTACCACGACCCTCTCTATCTCGTCG
GAAGGAAATGGACCCGCGCCCAGGCACCGCAGCAGCAGTAGCAAGGAGCG
CATCAGGAACCTGGACGTGAGACTGGAGTTCATCGACGAGATGGCGCAAG
AAGGCGCGGCTATCGACAACGGAGAGCTCTTCGCCGAGCCGCCGCTGCTC
GCCGCTCCCGTCCCGGGTGAGTGGGTGCAGCGCTGCGCGAATTTCAACAA
GACCGACAACTTCGACCACGGCGCGCACTGCGGCGGGCCGCTCGCGGAGC
CTTGTTTCGAGCGGGGACGCTGCGACACTGGGAAAGGGGGTGCCATGTTG
CCGAAGATCTACGTCTACGACCAACAGTGTCCAGCGACCATCCCGTGCCA
TCACATCCGTTACAAGAACCTGGGGGTGGACATAATTTACGTCAGGTGTG
GCCTCAGCGGGAGAGTCCTCCAACTCTTTTATTTACTGCGTCTGCCCATT
ATGGCTCTTTTCAACCGCCCCAAGCTCGGCCAACGGGCAGCGAATCTCGT
GCTGCTGCTGCTGCTGCTGCTGCACGGGACAACAGCTAGGCCATCGACTG
CGGCTGATCACGGCAGAGACGGGCTTCGAACGAAAGAATCGAGGAGGACT
GGTACCACGACCCTCTCTATCTCGTCGGAAGGAAATGGACCCGCGCCCAG
GCACCGCAGCAGCAGTAGCAAGGAGCGCATCAGGAACCTGGACGTGAGAC
TGGAGTTCATCGACGAGATGGCGCAAGAAGGCGCGGCTATCGACAACGGA
GAGCTCTTCGCCGAGCCGCCGCTGCTCGCCGCTCCCGTCCCGGGTGAGTG
GGTGCAGCGCTGCGCGAATTTCAACAAGACCGACAACTTCGACCACGGCG
CGCACTGCGGCGGGCCGCTCGCGGAGCCTTGTTTCGAGCGGGGACGCTGC
GACACTGGGAAAGGGGGTGCCATGTTGCCGAAGATCTACGTCTACGACCA
ACAGTGCTCGCTAGCCGACAGCCACCAGCTGCCCATCACCGACCACAGCA
AGGACGACAAGCAGAACCAGCACTCCTACTGGAGGGAGGCGGTGTGGAAA
GCGGGCATTCTGGCCGACACCTACGAGGAGGCGTGCCTGTTCATCCACGT
CAACACCCACAACCACGACGAGCCCTGCGCGACGCGGGCGCCCATGTGGA
ACGGAGGCGTGAACCATGTGATGATGGAGTTCACCCCCTGGTGGAATGCT
CGCTAGCCGACAGCCACCAGCTGCCCATCACCGACCACAGCAAGGACGAC
AAGCAGAACCAGCACTCCTACTGGAGGGAGGCGGTGTGGAAAGCGGGCAT
TCTGGCCGACACCTACGAGGAGGCGTGCCTGTTCATCCACGTCAACACCC
ACAACCACGACGAGCCCTGCGCGACGCGGGCGCCCATGTGGAACGGAGGC
GTGAACCATGTGATGATGGAGTTCACCCCCTGGTGGAAAGAGGGGAGGGG
TAAAAGCAGCATCAGCAACACGTACGCCATGGACTGGGCGTTCGACTCCC
TGAGCTGCTACTACCGCAGCGGCTTCGATCTGTCGCTGCCGCTGGTCCCC
GGAAAGCTCTTCCCCGGGTTGGAGTCGACCTCTCCCACGGCTCGGAAGTA
CTTCGCTACCTTCAAGAGAGGGGAGGGGTAAAAGCAGCATCAGCAACACG
TACGCCATGGACTGGGCGTTCGACTCCCTGAGCTGCTACTACCGCAGCGG
CTTCGATCTGTCGCTGCCGCTGGTCCCCGGAAAGCTCTTCCCCGGGTTGG
AGTCGACCTCTCCCACGGCTCGGAAGTACTTCGCTACCTTCAAGGGCACG
CTTTACCTCGGAGGGTACGGCATCGAGGAGCGGTCGGCCGTGTCTCGAGT
CCACGACCCTGCTAACCGCATCGTGTCGGTCACCCAGTGCTCGAGCATGC
ACGGCAAGCAGCTCCTGCCCGAAAACCGAGACTACTGCGATCGCTCTCAG
CGGAGGTACGACTCCTACGACTACGGAGACCTGATGAACACCACTTTCGC
GCTGGTTCCGTCCGGGCGATCGCCGGGAACGTTTCGGCTGGGGGAGGGCA
CGCTTTACCTCGGAGGGTACGGCATCGAGGAGCGGTCGGCCGTGTCTCGA
GTCCACGACCCTGCTAACCGCATCGTGTCGGTCACCCAGTGCTCGAGCAT
GCACGGCAAGCAGCTCCTGCCCGAAAACCGAGACTACTGCGATCGCTCTC
AGCGGAGGTACGACTCCTACGACTACGGAGACCTGATGAACACCACTTTC
GCGCTGGTTCCGTCCGGGCGATCGCCGGGAACGTTTCGGCTGGGGGAGAT
CATGAGCGCCGGCGCTATCCCCGTGTTCGTCGTGAGGGACTGGATAAAGC
CGTTCCAGGAGCAGATCGACTGGCCGTCGTTCTCCTTCACCTTTTCTCCG
GACAGCGTGGGCGCTGGGATGGCGGAGGTGCTGAGGGCCGTATCGCCAGA
CCAGCTCAGGGTGATGCAGGTGGGATAAATCATGAGCGCCGGCGCTATCC
CCGTGTTCGTCGTGAGGGACTGGATAAAGCCGTTCCAGGAGCAGATCGAC
TGGCCGTCGTTCTCCTTCACCTTTTCTCCGGACAGCGTGGGCGCTGGGAT
GGCGGAGGTGCTGAGGGCCGTATCGCCAGACCAGCTCAGGGTGATGCAGG
TGGGATAA
back to top