mRNA_L-elsbetiae_contig999.18911.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig999.18911.1 vs. uniprot
Match: D8LR72_ECTSI (Carbonic anhydrase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR72_ECTSI) HSP 1 Score: 461 bits (1187), Expect = 4.630e-158 Identity = 240/347 (69.16%), Postives = 263/347 (75.79%), Query Frame = 3 Query: 150 ARPATFVALGFLFGLLPSVPGFIPPTSGRMLPLTSSGRA---SRIDTSRVVLPPRSDGGAEATAAGAGEGGQKPDSDSYERLQAMLENDGSTDYIFENNRKWVADCLSKDPDTFNRLAKSQKPRYMYIGCSDSRVPAQNMMGLNTGELFVVRNVANLCVNTDHSLLAALHFAVNVLEVTDIIVCGHYGCGGVRAAMENVDHGLLEHWLLNVRNVIRLHNDELQKIEDFDEKRRRLVELNVQESCINLFANPIVQKKQATHAMPKIHGWAYDVETGLIKKLMIDFKSEIRKYRDVYTLYEFPRRXXXXXXXXXXPINGAMTPRRKAASTVSADPKVAMGWAKNVSGET 1181 +R AT ALG LFGLL VP F+PP+ L R +R DT +L PR +G +A +YERLQ M ENDGSTDYIF NNR WV + L++DPDTF RLA SQKPRYMYIGCSDSRVPAQNMMGLNTGELFVVRNVANLCVNTDHSLLAAL +AVNVLEVTDIIVCGHYGCGGVRAAMEN+DHGLLEHWLLN+RNV+RLHN+ELQ I D DEK RRLVELNVQESCINLFANPIVQKKQATH+MPKIHGWAYDV GL+K+L IDFK+EIRKYRDVY LYEFPRR NG+M PRR+ V DPKVA GWAKN +T Sbjct: 9 SRSATCFALGLLFGLLVPVPAFVPPSGAGRLASAHGHRGHAGTRADTRVFLLRPRPEGETDAETG------------AYERLQQMYENDGSTDYIFANNRAWVEERLAQDPDTFKRLANSQKPRYMYIGCSDSRVPAQNMMGLNTGELFVVRNVANLCVNTDHSLLAALAYAVNVLEVTDIIVCGHYGCGGVRAAMENIDHGLLEHWLLNIRNVVRLHNEELQGISDMDEKSRRLVELNVQESCINLFANPIVQKKQATHSMPKIHGWAYDVGNGLLKELDIDFKAEIRKYRDVYRLYEFPRRPPSHNGA-----NGSMVPRRRDRHRV-VDPKVAQGWAKNTLRDT 337
BLAST of mRNA_L-elsbetiae_contig999.18911.1 vs. uniprot
Match: A0A1W6IYH0_SACJA (Carbonic anhydrase n=2 Tax=Saccharina japonica TaxID=88149 RepID=A0A1W6IYH0_SACJA) HSP 1 Score: 410 bits (1055), Expect = 1.650e-138 Identity = 222/329 (67.48%), Postives = 250/329 (75.99%), Query Frame = 3 Query: 153 RPATFVA-LGFLFGLLPSVPGFIPPTSGRMLPLTSSGRASRIDTSRVVLPPRSDGGAEATAAGAGEGGQKPDSDSYERLQAMLEND-GSTDYIFENNRKWVADCLSKDPDTFNRLAKSQKPRYMYIGCSDSRVPAQNMMGLNTGELFVVRNVANLCVNTDHSLLAALHFAVNVLEVTDIIVCGHYGCGGVRAAMENVDHGLLEHWLLNVRNVIRLHNDELQKIEDFDEKRRRLVELNVQESCINLFANPIVQKKQATHAMPKIHGWAYDVETGLIKKLMIDFKSEIRKYRDVYTLYEFPRRXXXXXXXXXXPINGAMTPRRKAASTVSA 1133 RP+TFVA LG GL + GF+ LT+ G S T+ P RS A+A G+GG+ P+ +Y+R++AML+ND GS DYIF+NNR WV +S+DPDTF RLA SQ+P+Y+YIGCSDSRVPAQNMMGL TGELFVVRNVANLCVNTDHSLLAAL +AVNVLEVTDIIVCGHYGCGGVRAAMENVDHGLLEHWLLN+RNV RLH DEL+ I D DE+ +RLVELNVQESCINLFANPIVQKKQAT + PKIHGW YDV TGL+KKL IDFKSEIRKY+DVY LYEFPRR N AM PRRK AS A Sbjct: 9 RPSTFVAVLGLFLGLPACLTGFV---------LTAGG--SGATTALGKCPARSSSKAQAAK---GKGGE-PEKGAYDRMKAMLDNDDGSMDYIFQNNRDWVEGTISEDPDTFKRLATSQQPKYLYIGCSDSRVPAQNMMGLTTGELFVVRNVANLCVNTDHSLLAALTYAVNVLEVTDIIVCGHYGCGGVRAAMENVDHGLLEHWLLNIRNVQRLHLDELKTIPDVDERHKRLVELNVQESCINLFANPIVQKKQATSSQPKIHGWVYDVATGLLKKLDIDFKSEIRKYQDVYRLYEFPRRNSTS--------NEAMAPRRKGASAADA 314
BLAST of mRNA_L-elsbetiae_contig999.18911.1 vs. uniprot
Match: A0A835ZBM8_9STRA (Carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBM8_9STRA) HSP 1 Score: 341 bits (875), Expect = 9.080e-112 Identity = 159/246 (64.63%), Postives = 200/246 (81.30%), Query Frame = 3 Query: 375 YERLQAMLENDGSTDYIFENNRKWVADCLSKDPDTFNRLAKSQKPRYMYIGCSDSRVPAQNMMGLNTGELFVVRNVANLCVNTDHSLLAALHFAVNVLEVTDIIVCGHYGCGGVRAAMENVDHGLLEHWLLNVRNVIRLHNDELQKIEDFDEKRRRLVELNVQESCINLFANPIVQKKQATHAMPKIHGWAYDVETGLIKKLMIDFKSEIRKYRDVYTLYEFPRRXXXXXXXXXXPINGAMTPRRK 1112 YER +++ + + DYIF++N++WV DCL +DP+ F RL +Q P+Y+YIGCSDSRVPAQNM+GL TGELFV RNVANLCVNTD+SLL+ L +AV VLEVTDIIVCGHYGCGGVRAAMEN DHGLLEHWL+++RNV RLH EL +I + +E+ +RLVELNVQE+C+NLFANP+VQKKQAT A P+IHGW YD+ +GL+K L IDF++EIRKY+++Y+LYEFP+ P NG MTP +K Sbjct: 7 YERAKSIWDTAENLDYIFDSNKRWVQDCLEEDPEIFTRLKYAQAPKYLYIGCSDSRVPAQNMLGLTTGELFVHRNVANLCVNTDYSLLSVLTYAVEVLEVTDIIVCGHYGCGGVRAAMENKDHGLLEHWLMHIRNVQRLHQAELAEIPNEEERHQRLVELNVQEACMNLFANPVVQKKQATDAQPRIHGWVYDIGSGLLKDLKIDFRTEIRKYKNIYSLYEFPKSTIAGASAPVAP-NGRMTPLKK 251
BLAST of mRNA_L-elsbetiae_contig999.18911.1 vs. uniprot
Match: H6WB75_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB75_VAULI) HSP 1 Score: 320 bits (819), Expect = 6.030e-103 Identity = 144/229 (62.88%), Postives = 186/229 (81.22%), Query Frame = 3 Query: 357 KPDSDSYERLQAMLENDGSTDYIFENNRKWVADCLSKDPDTFNRLAKSQKPRYMYIGCSDSRVPAQNMMGLNTGELFVVRNVANLCVNTDHSLLAALHFAVNVLEVTDIIVCGHYGCGGVRAAMENVDHGLLEHWLLNVRNVIRLHNDELQKIEDFDEKRRRLVELNVQESCINLFANPIVQKKQATHAMPKIHGWAYDVETGLIKKLMIDFKSEIRKYRDVYTLYEFP 1043 K ++ E+ +++ D +++FENN+KWV + + KDP+ F RL +Q+P+Y+YIGCSDSRVPAQNM+GL GELFV+RNVANLC+N+D SLL+ L F++ VLEVTD+IVCGHYGCGGV AAM+N DHGLLEHWL ++RNV RLH EL +I D ++ +RLVELNVQESC+NLF+NPIVQKKQAT + P+IHGW YD+ TG +K L IDFK+EI+KYRD+Y LY+FP Sbjct: 35 KSTTEDTEKSKSIWSLDSPLEHLFENNKKWVRESVEKDPEVFTRLKDAQQPKYLYIGCSDSRVPAQNMLGLQAGELFVIRNVANLCINSDFSLLSVLLFSIEVLEVTDVIVCGHYGCGGVNAAMKNKDHGLLEHWLHHIRNVQRLHKSELVQIPDESQRFKRLVELNVQESCLNLFSNPIVQKKQATASQPRIHGWVYDIATGYVKDLKIDFKTEIKKYRDIYRLYDFP 263
BLAST of mRNA_L-elsbetiae_contig999.18911.1 vs. uniprot
Match: A0A7S2XTK6_9STRA (Carbonic anhydrase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTK6_9STRA) HSP 1 Score: 273 bits (697), Expect = 2.600e-85 Identity = 125/209 (59.81%), Postives = 162/209 (77.51%), Query Frame = 3 Query: 423 IFENNRKWVADCLSKDPDTFNRLAKSQKPRYMYIGCSDSRVPAQNMMGLNTGELFVVRNVANLCVNTDHSLLAALHFAVNVLEVTDIIVCGHYGCGGVRAAME-NVDHGLLEHWLLNVRNVIRLHNDELQKIEDFDEKRRRLVELNVQESCINLFANPIVQKKQATHAMPKIHGWAYDVETGLIKKLMIDFKSEIRKYRDVYTLYEFPR 1046 IFENN+KWV L +DPD F +L QKPRY++IGCSDSRVPA +MGL+ G++FV RNVANL VN D +LL+ L ++V VL+V D+IVCGHYGCGGV+AA DHGLLEHWL N+++VIR+H DEL IED +++ RLVEL+VQE CINLFANPIVQ+ Q TH P+IHG+ YD+ G +++L IDFK E+ K +D+Y+ Y+F + Sbjct: 45 IFENNKKWVHKHLEEDPDYFKKLKMGQKPRYLFIGCSDSRVPANEIMGLSAGDVFVHRNVANLVVNGDMNLLSVLQYSVEVLKVRDVIVCGHYGCGGVKAASTIGTDHGLLEHWLRNIKDVIRVHQDELNTIEDEEKRHERLVELSVQEQCINLFANPIVQRSQVTHGYPRIHGFVYDIGNGYLRELEIDFKKEVSKLKDIYSHYDFSK 253
BLAST of mRNA_L-elsbetiae_contig999.18911.1 vs. uniprot
Match: A0A6S9IM72_HETAK (Carbonic anhydrase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IM72_HETAK) HSP 1 Score: 272 bits (695), Expect = 3.710e-85 Identity = 127/210 (60.48%), Postives = 162/210 (77.14%), Query Frame = 3 Query: 411 STDYIFENNRKWVADCLSKDPDTFNRLAKSQKPRYMYIGCSDSRVPAQNMMGLNTGELFVVRNVANLCVNTDHSLLAALHFAVNVLEVTDIIVCGHYGCGGVRAAMENVDHGLLEHWLLNVRNVIRLHNDELQKIEDFDEKRRRLVELNVQESCINLFANPIVQKKQATHAMPKIHGWAYDVETGLIKKLMIDFKSEIRKYRDVYTLYEF 1040 S + +FENNRKWVA+ DPD F LAK Q P+Y++IGC+DSR+PAQ ++GL GELFV RNVANL VN D +LLA L ++V VL+V DIIVCGHY CGG++AA N DHGL+EHWL N+R++ RLH +EL+ IE + + RRLVELNVQE CINL+ANPIVQK Q ++P+IHG+ YD+ GL+K+L IDFK+EI K + Y+LY F Sbjct: 38 SFEQLFENNRKWVAEQKKNDPDYFKNLAKGQSPKYLFIGCADSRIPAQEVLGLKCGELFVHRNVANLVVNGDMNLLAVLQYSVEVLKVEDIIVCGHYECGGIKAACANHDHGLVEHWLRNIRDINRLHAEELEAIECEEARHRRLVELNVQEQCINLYANPIVQKAQLATSLPRIHGFVYDIAEGLVKELPIDFKAEISKIKQHYSLYNF 247
BLAST of mRNA_L-elsbetiae_contig999.18911.1 vs. uniprot
Match: A0A7S1N9X7_9EUGL (Carbonic anhydrase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N9X7_9EUGL) HSP 1 Score: 260 bits (664), Expect = 6.580e-79 Identity = 121/212 (57.08%), Postives = 157/212 (74.06%), Query Frame = 3 Query: 405 DGSTDYIFENNRKWVADCLSKDPDTFNRLAKSQKPRYMYIGCSDSRVPAQNMMGLNTGELFVVRNVANLCVNTDHSLLAALHFAVNVLEVTDIIVCGHYGCGGVRAAMENVDHGLLEHWLLNVRNVIRLHNDELQKIEDFDEKRRRLVELNVQESCINLFANPIVQKKQATHAMPKIHGWAYDVETGLIKKLMIDFKSEIRKYRDVYTLYEF 1040 D + + IFENNRKW DP+ F RL + Q+P+Y++IGC+DSR+PAQ +MG+ GE+FV RNVANL VN D +LL+ + +AV VL V DIIVCGHY CGGVRAA N DHGL+EHW+ N+R+V+RLH +EL + + + RRLVELNVQE CINLFANPI+Q++QA H +P+IHG YDV GL++KL +DFK IR+ R +Y F Sbjct: 131 DENLETIFENNRKWAEQMRKTDPNFFKRLKQGQEPKYLFIGCADSRIPAQELMGMKAGEMFVHRNVANLVVNNDLNLLSVIAYAVEVLHVKDIIVCGHYECGGVRAAESNKDHGLVEHWIRNIRDVVRLHRNELAVLTG-EMRHRRLVELNVQEQCINLFANPIIQRRQAAHGLPRIHGMVYDVGEGLLRKLDLDFKHSIREMRHIYDTGHF 341
BLAST of mRNA_L-elsbetiae_contig999.18911.1 vs. uniprot
Match: A0A2P4XQJ3_9STRA (Carbonic anhydrase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XQJ3_9STRA) HSP 1 Score: 241 bits (614), Expect = 3.750e-72 Identity = 112/211 (53.08%), Postives = 155/211 (73.46%), Query Frame = 3 Query: 411 STDYIFENNRKWVADCLSKDPDTFNRLAKSQKPRYMYIGCSDSRVPAQNMMGLNTGELFVVRNVANLCVNTDHSLLAALHFAVNVLEVTDIIVCGHYGCGGVRAAMENVDHGLLEHWLLNVRNVIRLHNDELQKIEDFDEKRRRLVELNVQESCINLFANPIVQKKQATHAMPKIHGWAYDVETGLIKKLMIDFKSEIRKYRDVYTLYEFP 1043 S + +FENN+KW DPD F++ ++ Q P+Y++IGCSDSRVPA+ + GL GE+FV RNVANL V+ D S L+ + +AV L+V DIIVCGHYGCGGVRAA+EN GLL++WL N+R+V+R+HNDELQ+I D +++ RR VELN E CIN+F +VQ+ Q + P+IHG YD++ G + ++ IDF+S +RKYR +Y L+ FP Sbjct: 34 SLERLFENNKKWREGKKLLDPDYFDKTSQGQHPQYLWIGCSDSRVPAEEITGLAPGEMFVHRNVANLVVSNDISSLSVVQYAVEHLKVKDIIVCGHYGCGGVRAAVENKSLGLLDNWLRNIRDVVRIHNDELQEIGDQEDRMRRTVELNTIEQCINVFKIGLVQRHQVKYGFPRIHGLVYDLKNGQLNEMDIDFQSYVRKYRSIYKLHSFP 244
BLAST of mRNA_L-elsbetiae_contig999.18911.1 vs. uniprot
Match: A0A0P1A5Q9_PLAHL (Carbonic anhydrase n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1A5Q9_PLAHL) HSP 1 Score: 238 bits (608), Expect = 1.530e-71 Identity = 109/212 (51.42%), Postives = 156/212 (73.58%), Query Frame = 3 Query: 411 STDYIFENNRKWVADCLSKDPDTFNRLAKSQKPRYMYIGCSDSRVPAQNMMGLNTGELFVVRNVANLCVNTDHSLLAALHFAVNVLEVTDIIVCGHYGCGGVRAAMENVDHGLLEHWLLNVRNVIRLHNDELQKIEDFDEKRRRLVELNVQESCINLFANPIVQKKQATHAMPKIHGWAYDVETGLIKKLMIDFKSEIRKYRDVYTLYEFPR 1046 S + +FENN+KW DPD F++ A+ Q P+Y++IGCSDSRVPA+ + GL GE+FV RNVANL V+ D S L+ + +AV L+V DIIVCGHYGCGGV AA+EN GLL++WL N+R+V+RLH+DEL++IE+ +++ RR VELN E CIN+F +VQ+ Q + P+IHG YD++ G + ++ IDF+S ++KY+ +Y L+ FP+ Sbjct: 6 SLERLFENNKKWCEGKKLLDPDYFDKTAQGQHPQYLWIGCSDSRVPAEEITGLAPGEMFVHRNVANLVVSNDISALSVVQYAVEHLKVKDIIVCGHYGCGGVNAALENKHLGLLDNWLRNIRDVVRLHSDELERIENHEQRLRRTVELNTIEQCINVFKIGLVQRHQVKYGFPRIHGLVYDLKNGQLNEMDIDFQSYVQKYKSIYKLHSFPK 217
BLAST of mRNA_L-elsbetiae_contig999.18911.1 vs. uniprot
Match: H3GC28_PHYRM (Carbonic anhydrase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GC28_PHYRM) HSP 1 Score: 239 bits (609), Expect = 2.650e-71 Identity = 112/224 (50.00%), Postives = 159/224 (70.98%), Query Frame = 3 Query: 372 SYERLQAMLENDGSTDYIFENNRKWVADCLSKDPDTFNRLAKSQKPRYMYIGCSDSRVPAQNMMGLNTGELFVVRNVANLCVNTDHSLLAALHFAVNVLEVTDIIVCGHYGCGGVRAAMENVDHGLLEHWLLNVRNVIRLHNDELQKIEDFDEKRRRLVELNVQESCINLFANPIVQKKQATHAMPKIHGWAYDVETGLIKKLMIDFKSEIRKYRDVYTLYEFP 1043 S R ++ + S + +FENNRKW DPD F++ ++ Q P+Y++IGCSDSRVPA+ + GL GE+FV RNVANL V+ D S L+ + +AV L+V DIIVCGHYGCGGV AA+EN GLL++WL N+R+V+RLH DEL +I++ +++ RR+VELN E CIN+F +VQ+ Q + P+IHG YD++ G + ++ IDF+S +RKYR +Y L+ FP Sbjct: 23 SLARAESTMALPTSLERLFENNRKWREGKKLLDPDYFDKTSQGQHPQYLWIGCSDSRVPAEEITGLAPGEMFVHRNVANLVVSNDISSLSVVQYAVEHLKVKDIIVCGHYGCGGVHAAVENKHMGLLDNWLRNIRDVVRLHQDELAEIDNHEQRMRRMVELNTIEQCINVFKIGLVQRHQVKYGFPRIHGLVYDIKNGELNEMDIDFQSYVRKYRSIYKLHSFP 246 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig999.18911.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig999.18911.1 >prot_L-elsbetiae_contig999.18911.1 ID=prot_L-elsbetiae_contig999.18911.1|Name=mRNA_L-elsbetiae_contig999.18911.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=351bp MWGSLARPATFVALGFLFGLLPSVPGFIPPTSGRMLPLTSSGRASRIDTSback to top mRNA from alignment at L-elsbetiae_contig999:15339..24183- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig999.18911.1 ID=mRNA_L-elsbetiae_contig999.18911.1|Name=mRNA_L-elsbetiae_contig999.18911.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8845bp|location=Sequence derived from alignment at L-elsbetiae_contig999:15339..24183- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig999:15339..24183- >mRNA_L-elsbetiae_contig999.18911.1 ID=mRNA_L-elsbetiae_contig999.18911.1|Name=mRNA_L-elsbetiae_contig999.18911.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2106bp|location=Sequence derived from alignment at L-elsbetiae_contig999:15339..24183- (Laminarionema elsbetiae ELsaHSoW15)back to top |