mRNA_L-elsbetiae_contig9948.18875.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9948.18875.1 vs. uniprot
Match: D8LMF2_ECTSI (Similar to Isochorismate Synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF2_ECTSI) HSP 1 Score: 431 bits (1108), Expect = 6.480e-128 Identity = 340/833 (40.82%), Postives = 388/833 (46.58%), Query Frame = 1 Query: 1 GGGIFSFLPIADARHGDAFTPLFDTPHSVDFEGVCRSMGLEYRRADTAEGFREAFLESQGGWSPGGVSSAGQARPSRHFFIEASTSRERNVPVHRSLGGIGRAAALQHLLRGVKLGWEFTPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKPTLLLLHGFMGSKEDWGGEFAELASASGHAVLAVDLPGHGGGGSGSAAHTGRPAAGVRREEIERDGXXXXXRCRRCEAGGGSVEERGLAAPPWFPPQPCCTAPSPLPSAVSAVGGDDDERGRTFGGSRTGVRGVVATSIANSGGACGLDSATRGGERGGNDHAXXXXXXXXXXXXXXXXDGA-PLWGLGGVSLAAEAVCAVCDAVGAGPYLVVGYSMGGRVALAMAARRPGLMEGGGGLVLVSSXXXXXXXXXXXXXXXXXXXXXXXXXXX-GRWPSIRGSGSSSGSNGGRRTREQAAGAFIDRWYAAPLWGGMQHRRPSEYSAMVRRRLANLGFPCTSR-----------------------------------TATANGR--------------------DSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALARSCLALSVARQADLWPALRALSEKSQEN----GSGPRTAAAALPVVYVAGELDGRYGGRSKSCLPVPVAXXXXXXXXXXXXXXXXXXXXSSSRNL------------------ADDAGVVGIGGVHSTLSLGGAKSGALRAAGEAMGAGSGGVGVRAAAAVAGTKTVADEFSIPMTAPLQLSLCRLTDRRGVLVRLEGALLPRSPGAADGRPGRGARDSENGRRVWGVGEVTPLPGE 2262 GGGIFSFLPIADARHGDAF+PLFDTPHSVDFEGVC SMGLEYRRA TA FR A+LESQG HFFIEA T RE N+PVHRSLGGIGRAAAL HLLRGV+LGWEFTPA +KPTLLLLHGFMGSKEDW G+FAELA+A GHAVL V+LPGHGG XXXXX FP P V DD+ RG + ++ DG P WGLGGV LAAEAV AVCDAVGAGPY++VGYSMGGRVALA+AARRP +MEGGGGLVLVSS GR P+ + S +G N R E+ A AF+DRWYAAPLWG ++HRRPS YSAM+ RRL+NLGF + R + NGR +SG LARSCLALSVARQA+LWP LR LS+K + G G + LPVVYVAGELD RYGGR C V + XXX ++ AD +GVV K ++ G GAG+G + +AA V G +TVA +LSLC+LT+RRGVLVRLE ALLP+SP GR + E GRRVWGVGEVTPLP + Sbjct: 1519 GGGIFSFLPIADARHGDAFSPLFDTPHSVDFEGVCLSMGLEYRRATTAREFRSAYLESQGVLGGXXXXXXXXXXXXXHFFIEAVTCREENLPVHRSLGGIGRAAALDHLLRGVRLGWEFTPAPVARTWPPSPAGVSNGSLGRGRGGGDK------KKPTLLLLHGFMGSKEDWRGDFAELAAAEGHAVLNVELPGHGGX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPGVP-----------NGDVATDDNPRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLVGSAPAQRDEQPRGSSSCAAGWDNESNDDGVVPSWGLGGVFLAAEAVGAVCDAVGAGPYVMVGYSMGGRVALALAARRPRVMEGGGGLVLVSSSPGLASSSAARLSRWACDRALASRIAALGRRPT---ASSVAGVNVRERPAEEEARAFLDRWYAAPLWGDVRHRRPSAYSAMIDRRLSNLGFDPSHRGRDDKPGAPREVIKSDSHGGKKAILNNSSTGLRRDSGLGNGRGEGNSSEAGLRTCSGRGLRSESGDRDGKKDREGICLVPTGRDGGAGGSRSLKARELARSCLALSVARQANLWPLLRQLSDKKNTDKMGGGGGAGDKNSVLPVVYVAGELDPRYGGR---CGAVGGSGTSGXXXGVHGEPQVGSANAANGTTPPPSFPXXXXXXXXXXGCGADISGVV--------------KGTSVTEVGRVAGAGAGCAALASAAVVPGARTVAQAVE-------ELSLCKLTERRGVLVRLE-ALLPQSPETGVGR------EQEEGRRVWGVGEVTPLPAD 2295
BLAST of mRNA_L-elsbetiae_contig9948.18875.1 vs. uniprot
Match: A0A6H5JZW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZW3_9PHAE) HSP 1 Score: 212 bits (540), Expect = 5.880e-54 Identity = 205/594 (34.51%), Postives = 240/594 (40.40%), Query Frame = 1 Query: 1024 WGLGGVSLAAEAVCAVCDAVGAGPYLVVGYSMGGRVALAMAARRPGLMEGGGGLVLVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXGRWPSIRGSGSSSGSNGGRRTR-----------------------EQAAGAFIDRWYAAPLWGGMQHRRPSEYSAMVRRRLANLGF------------PCTSR-------------------------TATANGRDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAL---------------------ARSCLALSVARQADLWPALRALSEKSQEN---GSGPRTAAAALPVVYVAGELDGRYGGR----SKSCLPVPVAXXXXXXXXXXXXXXXXXXXXSSSRNLADDAGVV-GIGGVHSTLSLGGAKSGALRAAGEAMGAGSGGVGVRAAAAVAGTKTVA---------------------------------------------------------------------------------------------DEFSIPMTAPLQLSLCRLTDRRGVLVRLEGALLPRSPGAADGRPGRGARDSENGRRVWGVGEVTPLPG 2259 WGLGG+ LAAEAV AVCDAVGAGPY+VVGYSMGGRVALA+AARRP +MEGGGGLVLVSS GR P+ + S +G N R E+ A AF+DRWYAAPLWG ++ RRPS YSAM+ RRL+NLGF P R + NGR G L ARSCLALSVARQA+LWP LR LS+K + G G + LPV+YVAGELD RYGGR SC + S + GV G GG + +S G + ++ G GAG+G + +AA V G +TVA +EFSIPMT+PLQLSLC+LT+RRGVLVRLE ALLPRS G G R+ E GRRVWGVGEVTPLPG Sbjct: 162 WGLGGIFLAAEAVGAVCDAVGAGPYVVVGYSMGGRVALALAARRPRVMEGGGGLVLVSSSPGLARLSRWACDRALASRIAAL----GRRPA---ASSVAGVNFSERYHKALPYFGLLSVCLSTLPPSSRPAEEEARAFLDRWYAAPLWGDVRQRRPSAYSAMIDRRLSNLGFGLDPGHRSHDDKPGAPREMVNSDSHGGKKAILNNSSTGLRQDSGLRNGRGEGNSSEVRLGAGSGRGLSSESDDRDWKKDREGMCLVPTGRDVGGGGGNGSMTARELARSCLALSVARQANLWPLLRQLSDKKNTDKMRGGGGAGDTSVLPVMYVAGELDPRYGGRCGAVGGSCTSGSSSGGVHGEPQVGSAHEANGTTPPPS--FPSEKGVAAGSGGCGADIS-GVVRGTSVNEVGRLAGAGAGCAALASAAVVPGARTVAQAVEEACPGVSVAVIAGAGHAVPTEAPAALFREVAKLSAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAAGVGEEERVARITRFSLEEFSIPMTSPLQLSLCKLTERRGVLVRLE-ALLPRS--------GVG-REKEEGRRVWGVGEVTPLPG 735
BLAST of mRNA_L-elsbetiae_contig9948.18875.1 vs. uniprot
Match: A0A6H5JV35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV35_9PHAE) HSP 1 Score: 115 bits (288), Expect = 1.300e-22 Identity = 61/97 (62.89%), Postives = 69/97 (71.13%), Query Frame = 1 Query: 4 GGIFSFLPIADARHGDAFTPLFDTPHSVDFEGVCRSMGLEYRRADTAEGFREAFLESQGG----WSPGGVSSAGQARPSRHFFIEAST-SRERNVPV 279 GGIFSFLPIADARHGDAF+PLFDTPHSVDFEGVC SMGLEYRRA TA FR A+LESQGG W G ++R R + A +RE +P+ Sbjct: 1273 GGIFSFLPIADARHGDAFSPLFDTPHSVDFEGVCLSMGLEYRRATTAREFRSAYLESQGGRRWRWQTGRCCCFQRSRRERETPLGARCMAREAGLPL 1369
BLAST of mRNA_L-elsbetiae_contig9948.18875.1 vs. uniprot
Match: A0A835ZAA5_9STRA (Thiamine diphosphate-binding protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAA5_9STRA) HSP 1 Score: 105 bits (261), Expect = 2.150e-21 Identity = 72/175 (41.14%), Postives = 86/175 (49.14%), Query Frame = 1 Query: 1 GGGIFSFLPIADARHGDAFTPLFDTPHSVDFEGVCRSMGLEYRRADTAEGFREAFLESQGGWSPGGVSSAGQARPS--RHFFIEASTSRERNVPVHRSLGGIGRAAALQHLLRGVKLGWEFTPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKPTLLLLHGFMGSKEDW 519 G IFSFLPIA RH D F+P FDTPH + FEGVC + G+ Y RA T + F + ESQ P + +H FIEA T R NV VHR LG AA LL V L W+ XXXXXX + T++LLHGFMGS++DW Sbjct: 114 GSAIFSFLPIA--RHADVFSPYFDTPHDLSFEGVCSTFGVRYARATTPQEFERIYRESQ---QPQXXXXXXXXXTTTVQHLFIEAVTDRADNVQVHRQLGAAATTAAHHVLLNDVHLAWDL--------------HLPGGTLHSGRSSSXXXXXXRGARGTVVLLHGFMGSRQDW 269
BLAST of mRNA_L-elsbetiae_contig9948.18875.1 vs. uniprot
Match: A0A0G4GZP4_VITBC (MR_MLE domain-containing protein n=5 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GZP4_VITBC) HSP 1 Score: 100 bits (248), Expect = 9.090e-18 Identity = 75/217 (34.56%), Postives = 96/217 (44.24%), Query Frame = 1 Query: 1 GGGIFSFLPIADARHGDAFTPLFDTPHSVDFEGVCRSMGLEYRRADTAEGFREAFLESQGGWSPGGVSSAGQARPSRHFFIEA-STSRERNVPVHRSLGGIGRAAALQHLLRGVKLGWEFTPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKPTLLLLHGFMGSKEDWGGEFAELASASGH---AVLAVDLPGHGG------GGSGSAAHT 621 GGGIF FLPIA H D F+PLFDTPH V FEG+C S+GL Y R T+E +S+A + + IEA T RE NV +HR + A + HL R ++ W PT++ LHG++GSK+DW A L +G + AVDL GHGG G + S AHT Sbjct: 1226 GGGIFHFLPIA--AHKDVFSPLFDTPHDVSFEGICASVGLPYSRVKTSEE----------------LSAAVSGKSAFPRVIEAVCTDRESNVSIHRDIQRAAGDAVVTHLARSIRWCW--------------------------------WRGGCRDSPTVVFLHGWLGSKDDWRTVIASLTQQAGGQCVGLFAVDLLGHGGTRSAAEGLAASLAHT 1392
BLAST of mRNA_L-elsbetiae_contig9948.18875.1 vs. uniprot
Match: I2CPY6_NANGC (2-succinyl-6-hydroxy--cyclohexadiene-1-carboxylic acid synthase 2-oxoglutarate decarboxylase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPY6_NANGC) HSP 1 Score: 85.5 bits (210), Expect = 2.380e-15 Identity = 59/173 (34.10%), Postives = 72/173 (41.62%), Query Frame = 1 Query: 1 GGGIFSFLPIADARHGDAFTPLFDTPHSVDFEGVCRSMGLEYRRADTAEGFREAFLESQGGWSPGGVSSAGQARPSRHFFIEASTSRERNVPVHRSLGGIGRAAALQHLLRGVKLGWEFTPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKPTLLLLHGFMGSKEDW 519 GGGIFSFLPIA RH D F+P FD+PH + F + ++ GL Y +A A Q G R IE T R +NV +HR LG R L + ++L W T KPTLLLLHGF+G KEDW Sbjct: 31 GGGIFSFLPIA--RHADVFSPYFDSPHDLHFGPITQAFGLPYHLCKSAGDLVAALHSCQAG--------------GRSSLIEVVTDRAQNVRIHRQLGAQIRTTVHAGLSQLLRLDWIRT--------------------------------GPRTKPTLLLLHGFLGCKEDW 155
BLAST of mRNA_L-elsbetiae_contig9948.18875.1 vs. uniprot
Match: A0A4D9D2W1_9STRA (MR_MLE domain-containing protein n=6 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2W1_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.710e-13 Identity = 73/228 (32.02%), Postives = 87/228 (38.16%), Query Frame = 1 Query: 1 GGGIFSFLPIADARHGDAFTPLFDTPHSVDFEGVCRSMGLEYRRADTAEGFREAFLESQGGWSPGGVSSAGQARPSRHFFIEASTSRERNVPVHRSLGGIGRAAALQHLLRGVKLGWEFTPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKPTLLLLHGFMGSKEDWGG---EFAELASASGHAV----------------------------LAVDLPGHG 591 GGGIFSFLPIA RH D F+P FD+PH + F + ++ GL Y +A A Q G R IE T R +NV +HR LG R L + ++L W T KPTLLLLHGF+G KEDW E ASAS + LAVDLPGHG Sbjct: 1107 GGGIFSFLPIA--RHADVFSPYFDSPHDLHFGPITQAFGLPYHLCKSAGDLVAALHSCQAG--------------GRSSLIEVVTDRAQNVRIHRQLGAQIRTTVHAGLSQLLRLDWIRT--------------------------------GPRTKPTLLLLHGFLGCKEDWTPLLWEAGGCASASNAGLSCSSSSPNTIVGVSGGSGARGLAMDYDCLAVDLPGHG 1286
BLAST of mRNA_L-elsbetiae_contig9948.18875.1 vs. uniprot
Match: A0A7S3VTC1_DUNTE (Hypothetical protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VTC1_DUNTE) HSP 1 Score: 77.0 bits (188), Expect = 3.580e-12 Identity = 41/97 (42.27%), Postives = 55/97 (56.70%), Query Frame = 1 Query: 1 GGGIFSFLPIADARHGDAFTPLFDTPHSVDFEGVCRSMGLEYRRADTAEGFREAFLESQGGWSPGGVSSAGQARPSRHFFIEASTSRERNVPVHRSL 291 GGGIFSFLPIA+A FT L+ TP +VD EG+CR+ G+ ++RA T E +++A + G +RH +E T R NV VHR L Sbjct: 116 GGGIFSFLPIANAMPEQQFTQLWATPQNVDLEGMCRAHGIPHQRASTPEEYQQALNSAWG--------------LNRHSVVEVVTGRSANVDVHRML 198
BLAST of mRNA_L-elsbetiae_contig9948.18875.1 vs. uniprot
Match: A0A7S0H9L0_9CRYP (Isochorismate synthase (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0H9L0_9CRYP) HSP 1 Score: 77.8 bits (190), Expect = 6.250e-11 Identity = 60/197 (30.46%), Postives = 81/197 (41.12%), Query Frame = 1 Query: 1 GGGIFSFLPIADARHGDAFTPLFDTPHSVDFEGVCRSMGLEYRRADTAEGFREAFLESQGGWSPGGVSSAGQARPSRHFFIEASTSRERNVPVHRSLGGIGRAAALQHLLRGVKLGWEFTPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKPTLLLLHGFMGSKEDWGGEFAELASASGHAVLAVDLPGHG 591 G GIF FLPIA +H + F H+V+FE + S G++Y RA T F ++ S+G +H +EA TS +R V VHR + + L + V+ W + KP LLLLHGF+G KEDW L + +AVDLPGHG Sbjct: 1081 GCGIFRFLPIA--QHAEMMEKFFLNSHNVNFESLASSFGIDYMRASTTAEFDSCLHHAE---------SSG-----KHVLLEAVTSSDRLVQVHRDIAAAVGYSLDLFLEQFVQTSWVW--------------------------------HGDRDKPVLLLLHGFLGCKEDWDPLVPLLLQDGSCSCIAVDLPGHG 1229
BLAST of mRNA_L-elsbetiae_contig9948.18875.1 vs. uniprot
Match: E1Z4H3_CHLVA (MR_MLE domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z4H3_CHLVA) HSP 1 Score: 75.9 bits (185), Expect = 2.760e-10 Identity = 41/97 (42.27%), Postives = 52/97 (53.61%), Query Frame = 1 Query: 1 GGGIFSFLPIADARHGDAFTPLFDTPHSVDFEGVCRSMGLEYRRADTAEGFREAFLESQGGWSPGGVSSAGQARPSRHFFIEASTSRERNVPVHRSL 291 GGGIFSFLPIA+A D FTPL+ TP VD EG+CR+ G+ ++ AEG A + G +RH IE TSR N+ HR + Sbjct: 1341 GGGIFSFLPIAEALPEDVFTPLWATPQHVDLEGMCRAHGIPHQTVTAAEGLPAALRSAWGS--------------NRHSVIEVVTSRTSNLQRHREI 1423 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9948.18875.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9948.18875.1 >prot_L-elsbetiae_contig9948.18875.1 ID=prot_L-elsbetiae_contig9948.18875.1|Name=mRNA_L-elsbetiae_contig9948.18875.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=754bp GGGIFSFLPIADARHGDAFTPLFDTPHSVDFEGVCRSMGLEYRRADTAEGback to top mRNA from alignment at L-elsbetiae_contig9948:820..6323+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9948.18875.1 ID=mRNA_L-elsbetiae_contig9948.18875.1|Name=mRNA_L-elsbetiae_contig9948.18875.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5504bp|location=Sequence derived from alignment at L-elsbetiae_contig9948:820..6323+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9948:820..6323+ >mRNA_L-elsbetiae_contig9948.18875.1 ID=mRNA_L-elsbetiae_contig9948.18875.1|Name=mRNA_L-elsbetiae_contig9948.18875.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4524bp|location=Sequence derived from alignment at L-elsbetiae_contig9948:820..6323+ (Laminarionema elsbetiae ELsaHSoW15)back to top |