mRNA_L-elsbetiae_contig994.18868.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig994.18868.1 vs. uniprot
Match: D7FQY5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQY5_ECTSI) HSP 1 Score: 588 bits (1515), Expect = 1.040e-204 Identity = 302/504 (59.92%), Postives = 375/504 (74.40%), Query Frame = 3
Query: 96 DLXXSHIPKILKGCLHTICQNCAEERLQRSKDGSSIKCPLCGVVTSNVTTTNDLQDNILVLQDLHRKSRNCDFCDEVVDALHFCNECESLLCTFHAKNHAVSRGTKDHKVISLKGRECEGSVPGVSRRILIMCGRHRDVPAKLFCSKPCSTMICYDCSVDEHSGHTVLLADSEEVEIRHRTDLTRQGVNMGHRFAALQGALDAIESVKTGVEQNSRMAEKAAVKFFSSVRAAVDSREKAVLKNLRAERAKKTQDLDAQLEKLEKAVNAYTVILEMVDKCMENLHGNQLLAMVPVLRESISKHEANFPSIELHPCAKDRVEFEHDRRITSALRQGISQLGYLAHTEADFRRVPDNKQRKERSKGLQK-----STPNDHNIHFTLAAAVGARPREATSATPTDVVVVEIRKGSEHEFLENGIAGPVIGKVALTVKLKDAKHLTYESEHFFESLSQQAAPERQQKLHS-----------SPYSDGGDDIPTVRFTKTLRVLGRRERG 1559
DL SHIPK+LKGCLHTICQNCAEE LQRSKDGSSI CPLCGV TS+VT+T+ LQDNI+ LQD+HRK+ +CDFCD+V A H C+EC SLLCTFH H+VSRGTK H+V+SLK RE S R+ I C RHRDV AKLFCS+PC T IC++CSV EHSGH+V +DS EVE HR LTR+GV++GHR A ++G LDA+E+VKTGVE+++R+AE A V+ FS++RAAVDSREK +LKNLRA+RA+KTQDL+AQL KL + + AY + L+ + +E LHG+Q LAM P +RE + EA FPS+EL PC +DRVEFEHDR I +ALRQGIS+LG + + +++KE+S ++ STP++HNIHF+LAA VGARP+EAT A+PTD V+VEIR GSEH+FL++G GPVIG+VAL K K AKHL YE+EHFFESLSQ+A P RQ + +P DG D +P VRFTK LRV GRR G
Sbjct: 29 DLTFSHIPKVLKGCLHTICQNCAEEGLQRSKDGSSIMCPLCGVSTSDVTSTSALQDNIVALQDVHRKNSHCDFCDDVAKASHVCHECASLLCTFHMTAHSVSRGTKSHRVVSLKNREA-------SHRVQITCARHRDVEAKLFCSEPCGTTICHNCSVAEHSGHSVFFSDSAEVEQVHRAGLTRRGVSLGHRLARVRGGLDAVEAVKTGVEKHTRLAESATVQAFSAIRAAVDSREKEILKNLRADRAQKTQDLNAQLAKLGQVMRAYEIALDSTNTSLERLHGDQFLAMEPTIRECLDAREAEFPSLELTPCVEDRVEFEHDRSIANALRQGISRLGCVVNAVRP-------RKKKEKSTAPEQELHASSTPSEHNIHFSLAAIVGARPQEATLASPTDKVIVEIRSGSEHDFLKSGTTGPVIGRVALHTKFKGAKHLAYETEHFFESLSQRATPTRQSRKQQHQAEKERQKQPTPSRDG-DCVPAVRFTKVLRVFGRRGEG 517
BLAST of mRNA_L-elsbetiae_contig994.18868.1 vs. uniprot
Match: A0A7S3UYW7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYW7_HETAK) HSP 1 Score: 98.6 bits (244), Expect = 3.010e-18 Identity = 90/351 (25.64%), Postives = 143/351 (40.74%), Query Frame = 3
Query: 108 SHIPKILKGCLHTICQNCAEERLQRSKDGSSIKCP----LCGVVTSNVTTTNDLQDNILVLQDLH-----RKSRNCDFCDEVVDALHFCNECESLLCTFHAKNHAVSRGTKDHKVISL----KGRECEGSVPGVSRRILIMCGRHRDVPAKLFCSKPCSTMICYDCSVDEHSGHTVLLADSEEVE-IRHRTDLTRQGVNMGHRFAALQGALDAIESVKTGVEQNSRMAEKAAVKFFSSVRAAVDSREKAVLKNLRAERAKKTQDLDAQLEKLEKAVNAYTVILEMVDK-CMENLHGN-QLLAMVPVLRESISKHEANFPSIELHPCAKDRVEFEHDRRITSALRQGISQLG 1112
SH+PK+L CLH+ CQ C E+ + +S+ I CP L L ++ V+ L K R CD C E A C C LC FH +NHA SR T H+V+SL + R +V V R C H AKLFC C+ +C+DCS+ H H L + +R R + R + L A+ +I + + + +F +R ++D RE+++L+ L + + VD C H N ++L + +++ + ++L+P + + F+ D R+ AL+ LG
Sbjct: 4 SHVPKVLD-CLHSFCQTCLEDLVVKSERKDCITCPDKDCLLETPIGPELRITGLPNDYTVIHSLRLAKQLAKDRWCDECAEEAAAAAHCASCGLGLCAFHRENHARSRATAAHQVLSLEDFGRSRHLRRAVAPVGRH----CHLHPGEAAKLFCWD-CAAPVCHDCSMGAHQDHAYDLVEQAAPPCLRELAGGLRAASD---RISQLDYAVKSINIRQQAIGEKVEALSTDIAVYFDELRQSIDRREESLLQKLXXXXXXXXXXXXXXXXXXREHTEELKRAHQFVDSVCYPQKHSNTEILDLYFTMKQRLQDLLEQCKDVQLNPLEEVDIVFDGDERLGKALQSKFEILG 345
BLAST of mRNA_L-elsbetiae_contig994.18868.1 vs. uniprot
Match: A0A8J1YCJ9_OWEFU (Ofus.G25231 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1YCJ9_OWEFU) HSP 1 Score: 84.7 bits (208), Expect = 1.330e-13 Identity = 64/222 (28.83%), Postives = 105/222 (47.30%), Query Frame = 3
Query: 117 PKILKGCLHTICQNCAEERLQRSKDG--SSIKCPLCGVVT------SNVTTTNDLQDNIL-----VLQDLHRKSRNCDFC---DEVVDALHFCNECESLLCTFHAKNHAVSRGTKDHKVISLKG---RECEGSVPGVSRRILIMCGRHRDVPAKLFCSKPCSTMICYDCSVDEHSGHT-VLLADSEEVEIRH----------RTDLTRQGVNMGHRFAALQG 692
PK L CLH+ C+ C ++ +Q +D + CP+C T +N TN ++ + L++ S NCD C DE+ A+ C EC LC K+H +R K H+ + L G ++ + ++ G+ +R I C H D P K +C K T++C DC + +HSGH+ V + + + E+R+ R DL + + +QG
Sbjct: 31 PKSLT-CLHSFCEGCLDKWIQTERDSRKKTYPCPVCKCETDIPNGGANSYRTNFTMQSLAEALERTKKQLNKSSINCDICAQGDELRPAVARCIECAEYLCNTCDKSHGRTRLLKSHQRVKLTGDIEKDSKIAIDGLVQRN-IDCTEHNDQPLKFYC-KTDKTIVCRDCCITDHSGHSCVKIENVAKEELRNVSALIGLAIQRKDLLEKQLKNSENLTDIQG 249
BLAST of mRNA_L-elsbetiae_contig994.18868.1 vs. uniprot
Match: A0A8J1TQI4_OWEFU (Ofus.G052043 protein n=2 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TQI4_OWEFU) HSP 1 Score: 82.8 bits (203), Expect = 5.420e-13 Identity = 67/220 (30.45%), Postives = 96/220 (43.64%), Query Frame = 3
Query: 42 CPCCDNTFQTIPRGVEICDLXXSHIPKILKGCLHTICQNCAEERLQRSKDG--SSIKCPLC--------GVVTS---NVTTTNDLQDNILVLQDLHRKSRNCDFCDEVVD---ALHFCNECESLLCTFHAKNHAVSRGTKDHKVISLKGRECEGSVPGVSRRIL--IMCGRHRDVPAKLFCSKPCSTMICYDCSVDEHSGHT-VLLADSEEVEIRHRTDL 644
CP C +T +T PK LK CLH+ C+ C +E +Q KD + CP+C G TS N T + + + L + S NCD C + A+ C EC LC K H + K HK + L G S + + I C H D P K +C K T++C DC + +HSGH+ V + D + E+R+ + L
Sbjct: 17 CPICLDTVKT---------------PKSLK-CLHSFCEGCLDEWIQAEKDSRKKTYPCPVCKCEADIPNGGATSYRTNFTMKSMAEALERTKKQLGKSSINCDICAQGKQNTCAVARCIECAEYLCDACDKYHGRIKLLKSHKRVKLTGDPELDSKIAIDSLVQRNIHCPEHNDQPLKFYCKKD-KTIVCRDCCITDHSGHSCVKIEDVAKEELRNVSTL 219
BLAST of mRNA_L-elsbetiae_contig994.18868.1 vs. uniprot
Match: A0A8J1UWW5_OWEFU (Ofus.G2681 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UWW5_OWEFU) HSP 1 Score: 82.8 bits (203), Expect = 5.590e-13 Identity = 67/247 (27.13%), Postives = 111/247 (44.94%), Query Frame = 3
Query: 42 CPCCDNTFQTIPRGVEICDLXXSHIPKILKGCLHTICQNCAEERLQRSKDG--SSIKCPLCGVVT------SNVTTTNDLQDNIL-----VLQDLHRKSRNCDFC---DEVVDALHFCNECESLLCTFHAKNHAVSRGTKDHKVISLKG---RECEGSVPGVSRRILIMCGRHRDVPAKLFCSKPCSTMICYDCSVDEHSGHT-VLLADSEEVEIRH----------RTDLTRQGVNMGHRFAALQG 692
CP C +T +T PK L CLH+ C+ C ++ +Q +D + CP+C T +N TN ++ + L++ NCD C D++ A+ C EC LC K+H +R K H+ + L G ++ + ++ G+ +R I C H D P K +C K T++C DC + +HSGH+ V + + + E+R+ R DL + + +QG
Sbjct: 17 CPICLDTVKT---------------PKSLT-CLHSFCEGCLDKLIQVERDSRKQTYPCPVCKCETDIPNGGANSYRTNFTMKSLAEALERTKKQLNKSRINCDICAQGDKLRPAVARCIECAEYLCNTCDKSHGRTRLLKSHQRVKLTGDIEKDSKIAIDGLVQRN-IDCTEHNDQPLKFYC-KTDKTIVCRDCCITDHSGHSCVKIENVAKEELRNVSALIGLAIQRKDLLEKQLKNSENLTDIQG 245
BLAST of mRNA_L-elsbetiae_contig994.18868.1 vs. uniprot
Match: A0A6P5AZG9_BRABE (protein PML-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AZG9_BRABE) HSP 1 Score: 74.3 bits (181), Expect = 2.590e-10 Identity = 71/300 (23.67%), Postives = 121/300 (40.33%), Query Frame = 3
Query: 21 MTEDEESCPCCDNTFQTIPRGVEICDLXXSHIPKILKGCLHTICQNCAEERLQRSKDGSSIKCPLC---------GVVTSNVTTTNDLQDNILVLQDLHRKSRN-----CDFCDEVVDALHFCNECESLLCTFHAKNHAVSRGTKDHKVISLKGRECEGSVPGVSR-RILIMCGRHRDVPAKLFCSKPCSTMICYDCSVDEHSGHTVLLADSEEVEIRHRTDLTRQGVNMGHRFAALQGALDAIESVKTGVEQNSRMAEKAAVKFFSSVRAAVDSREKAVLKNLRAERAKKTQDLDAQLE 875
++ D C C +T++ PKIL CLHT C++C E +Q++ DG + CP+C GV + + L + + + H+ + C CDE A C+EC LC H R TK H + + + + G V R R C +H KL+C + C IC +C++ EH L EEV + + R + + + +K ++ N+ A + K ++ A V + +L + E + + +DA++E
Sbjct: 10 VSNDFLECTICCDTYKN---------------PKILIPCLHTFCEHCLREWVQKN-DGDTFPCPICRQPVPLPQDGV--DGLKNNSHLASLVKAVTEHHKIRQGKDVLVCTSCDEGKPATSRCSECAEFLCANCESVHRRVRATKAHTLFTFEELKT-GKYDKVFRARTAPPCSKHSGEILKLYC-RTCEAPICSECALFEHRDSQHDLKRIEEVAAEKKETILALTPQCQARMQLFRQTEEVQKRLKEQLQLNAEGARQNVHKTVQTLTALVKEEGERLLTCIDTEEKTRKKQIDAEIE 289
BLAST of mRNA_L-elsbetiae_contig994.18868.1 vs. uniprot
Match: A0A8J1Y5Q6_OWEFU (Ofus.G151695 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1Y5Q6_OWEFU) HSP 1 Score: 73.2 bits (178), Expect = 5.750e-10 Identity = 70/278 (25.18%), Postives = 116/278 (41.73%), Query Frame = 3
Query: 135 CLHTICQNCAEERLQ--RSKDGSSIKCPLCG-----------VVTSNVTTTNDLQDNILVLQDLHRKSRNCDFC---DEVVDALHFCNECESLLCTFHAKNHAVSRGTKDHKVISLKG---RECEGSVPGVSRRILIMCGRHRDVPAKLFCSKPCSTMICYDCSVDEHSGHTVLL----ADSEEVEIRHRTDLTRQGVNMGHRFAALQGALDAIESVKTGVEQNSRMAEKAAVKFFSSVRAAVDSREKAVLKNLRAERAKKTQDLDAQLEKLEKAVNA 899
C H+ C+ C + ++ ++K CP+C +N+T + ++ L ++ NCD C E V A+ C EC +C K H SR T+ H + L G ++ ++ +R I C +H D P + FC + +IC DCS+ EH GH+ A EE I L Q + +F ++ A D+I+S E+N++ A+L+++ A+ A K + LD +KL A
Sbjct: 35 CGHSFCKGCIGKWMKEHKAKGNDRYPCPVCNEQLEIPKNGADAYGTNITIKSMVEILENQLTKGQNRNVNCDICIQEGEAVPAMSRCVECAEHMCKHCNKAHRRSRATQSHTIYGLTGDAEKDARAALDNYIKRN-IECPKHPDQPLRFFCKQD-KAVICRDCSITEHPGHSCQAIEEAAKGEERNIAALLGLANQRKEIFDKF--IKEANDSIQSC----EKNTQ----------------------ALLRDIDADHAAKRKQLDEHFDKLRNKAKA 282
BLAST of mRNA_L-elsbetiae_contig994.18868.1 vs. uniprot
Match: A0A6P4Z204_BRABE (tripartite motif-containing protein 3-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4Z204_BRABE) HSP 1 Score: 71.2 bits (173), Expect = 2.630e-9 Identity = 72/314 (22.93%), Postives = 129/314 (41.08%), Query Frame = 3
Query: 117 PKILKGCLHTICQNCAEERLQRSKDGSSIKCPLC-------------GV--VTSNVTTTNDLQDNILVLQDLHRKSRNCDFCDEVVDALHFCNECESLLCTFHAKNHAVSRGTKDHKVISLKGRECEGSVPGVSRRILIMCGRHRDVPAKLFCSKPCSTMICYDCSVDEHS-GHTVLLADSEEVEIRHRTDLTRQGVNMGHRFAALQGALDAIESVKTGVEQNSRMAEKAAVKFFSSVRAAVDSREKAVLKNLRAERAKKTQDLDAQLEKLEKAVNAYTVILEMVDKCMENLHGNQLLAMVPVLRESISKHEAN 1010
PK+L C HT+C+ C E S G +CPLC GV + SN L L L L C C AL C +C +LC H + + H +I+L E +R+I C RH +C +PC+T++C DC+VDEH G + E+V ++R + + + + ++ T +N EK + + +R+ + E+ ++ ++ + ++L + +++EK + L ++ + +LL++ + E + KH A+
Sbjct: 28 PKLLP-CFHTLCKRCVEGFANIS-GGRGFQCPLCRANVKLPCPVQLGGVDKLPSNFYVNKMLDFRRLKLSKLSHVQ--CQMCKSGARALAVCGDCTLMLCNNCVGVHRNTPALQGHAIITLGDLENPAMRSQYARQIY--CPRHPGQRTTFYC-EPCATLVCRDCTVDEHRPGQKHDPREVEKVAPKYRASVEGLMKKTEEVVSKINQKVANLDKELTATAENCEQVEKEVQQHYKKLRSKLKQEEQRMIIKIQKTNKDRKEELIHEKKEMEKELEDTNEGLAFCQNILDRDNKTELLSLRQQMEERL-KHFAS 333
BLAST of mRNA_L-elsbetiae_contig994.18868.1 vs. uniprot
Match: UPI0018D73887 (tripartite motif-containing protein 2-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D73887) HSP 1 Score: 70.9 bits (172), Expect = 3.130e-9 Identity = 83/356 (23.31%), Postives = 137/356 (38.48%), Query Frame = 3
Query: 117 PKILKGCLHTICQNCAEERLQRSKDGSS-IKCPLCGVVT----------------SNVTTTNDLQDNILVLQDLHRKSRNCDFCDEVVDALHFCNECESLLCTFHAKNHAVSRGTKDHKVISLKGRECEGSVPG--VSRRILIMCGRHRDVPAKLFCSKPCSTMICYDCSVDEHSGHTVLLADSEEVEIRHRTDLTRQGVNMGHRFAALQGALDAIESVKTGVEQNSRMAEKAAVKFFSSVRAAVDSREKAVLKNLRAERAKKTQDLDAQLEKLEKAVNAYTVILEMVDKCMENLHGNQLLAM-----VPVLRESISKHEANFPSIELHPCAKDRVEFEHDRRITSALRQGISQLG 1112
PKIL CLHT C NC + L + + + I CP+C T S++ + Q+ L Q S CD CDE ++ + C +CE LC H + TK H+V ++ E + VP +S+ + C +H + +C + C + C C+ +H A+ + EI + R+ VN L +S K + N E A + V A + AKK +++ K + + T I + D+ E +H N M + + K +F + L P +EF+ D + ++ G S +G
Sbjct: 33 PKILD-CLHTFCLNCLDGMLSKQQPSTGKITCPVCRKETPVPDAGLPGLLDCFFLSSLVDEINQQERSLETQQQATTSPTCDQCDEGLEVVSRCLDCEENLCQLCKAAHVRFKRTKTHRVTLIEHLE-QKDVPSADLSKTYSLKCPKHANQEMHFYC-ETCKMLACGTCAAIDHRS-----AEHKYSEIANAIRSYREEVN---------DVLQKFQSSKEEFKANEESVEHARNRLKIMVNRACSDIQ-----------AKKEEEIAKIERKSQLLTDKVTEIGKKRDEEFEKVHTNNKKKMKRAEEIEAAVTDLMKQADDFELLNLKPKVMHNLEFQKDLKF-ERVKHGESFIG 359
BLAST of mRNA_L-elsbetiae_contig994.18868.1 vs. uniprot
Match: UPI0018D6A939 (E3 ubiquitin-protein ligase TRIM56-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D6A939) HSP 1 Score: 70.5 bits (171), Expect = 4.120e-9 Identity = 48/188 (25.53%), Postives = 84/188 (44.68%), Query Frame = 3
Query: 69 TIPRGVEICDLXXSHI--PKILKGCLHTICQNCAEERLQRSKD-GSSIKCPLCGVVTS----------NVTTTNDLQDNI----LVLQDLHRKSRNCDFCDEVVDALHFCNECESLLCTFHAKNHAVSRGTKDHKVISLKGRECEGSVPGVSRRILIMCGRHRDVPAKLFCSKPCSTMICYDCSVDEH 581
TI RG C + PK+L CLH+ C NC +E + R + I CP C VT+ N + L D +L D +R+C+ CDE ++A+ C +C+ +C H + TK H++++ + + + ++ + C +H + +C + C T+ C C+ +H
Sbjct: 12 TISRGHLECPICCCRFTDPKLLD-CLHSCCLNCLDELISRQQPKAGEITCPFCRRVTAVPDTGLQGLPNCFFLSSLVDEFNKQERLLGDAPADTRSCEECDEGLEAVSRCLDCDGNICQKCLDVHRKLKSTKKHRIVNFDQSRSQVPLADLRKKDWLQCHKHTNQELCFYC-ETCETLACAKCAALDH 197 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig994.18868.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig994.18868.1 >prot_L-elsbetiae_contig994.18868.1 ID=prot_L-elsbetiae_contig994.18868.1|Name=mRNA_L-elsbetiae_contig994.18868.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=522bp MTEDEESCPCCDNTFQTIPRGVEICDLTFSHIPKILKGCLHTICQNCAEEback to top mRNA from alignment at L-elsbetiae_contig994:236..5230+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig994.18868.1 ID=mRNA_L-elsbetiae_contig994.18868.1|Name=mRNA_L-elsbetiae_contig994.18868.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4995bp|location=Sequence derived from alignment at L-elsbetiae_contig994:236..5230+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig994:236..5230+ >mRNA_L-elsbetiae_contig994.18868.1 ID=mRNA_L-elsbetiae_contig994.18868.1|Name=mRNA_L-elsbetiae_contig994.18868.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3132bp|location=Sequence derived from alignment at L-elsbetiae_contig994:236..5230+ (Laminarionema elsbetiae ELsaHSoW15)back to top |