mRNA_L-elsbetiae_contig9885.18823.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9885.18823.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 154 bits (388), Expect = 6.000e-37 Identity = 181/439 (41.23%), Postives = 216/439 (49.20%), Query Frame = 3 Query: 57 DLLAVVLTSAQWAELLKAPLECAVRQGNRGLAQKLVRAGAEIGGALHAAVWGGHEGVVSDLLENGAPIEANHVSGDGDTPLHLAALMNATKMVQLLLLKGAAKDA---------------------------------KDMQYRTPL-YVAALGGHAATALALMAAGADVNLPCGASERSAVXXXXXXXXXXXXXXXXXXXXXXXDLAICEETPLHFAAIYDTEVIDVXXXXXXXXXXXXXXXXXXXXDAAGNTSLEAVLALLXXXXXXXXXXXXXXXXXXXXXXMAGTQGAAEVVDSLLRSGADETILNHRGEAAADLVGKLVVEEDQLAAEDADRVRQLLANAPADRAWRRRGYFVLRRAHPDRMRQNRDISNAR-DGAARRARSSAKLGRTETSGCNETAGGSMVDGRAGGDW-------------GIFRSIVGYL 1229 D + +LTS Q AELL+A LE A +GN+ LAQ+LVRAGAEIG ALH AV GGH +VSDLLE+ A + A + DG TPL + Q++ P + AAL GH A++ GADV+ A +R+A XXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXX AG AG QGAAEVV+SLLR+GADETI N +G A D++G+ V EED+L ED +RVR+LLANAPADRAWRRRGY ++ RA PDR+ + R S ARR RS AK+ R AG S VD GG+W GIFR+IV YL Sbjct: 3 DFIFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGDALHRAVDGGHREIVSDLLESEASLAATDM--DGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRSTQFKCPATHAAALEGHVEILRAIIEHGADVDA-VDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMKAGR--------------------------------QAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLT-EDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARG-----IAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
BLAST of mRNA_L-elsbetiae_contig9885.18823.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 115 bits (288), Expect = 5.600e-24 Identity = 116/360 (32.22%), Postives = 143/360 (39.72%), Query Frame = 3 Query: 3 MENMDRRESLRGAEDDTFDLLAVVLTSAQWAELLKAPLECAVRQGNRGLAQKLVRAGAEIGGALHAAVWGGHEGVVSDLLENGAPIEANHVSGDGDTPLHLAALMNATKMVQLLLLKGAAKDAKDMQYRTPLYVAALGGHAATALALMAAGADVNLPCGASERSAVXXXXXXXXXXXXXXXXXXXXXXXDLAICEETPLHFAAIYD-TEVIDVXXXXXXXXXXXXXXXXXXXXDAA---GNTSLEAVLALLXXXXXXXXXXXXXXXXXXXXXXMAGTQGAAEVVDSLLRSGADETILNHRGEAAADLVGKLVVEEDQLAAEDADRVRQLLANAPADRAWRRRGYFVLRRAHPDRMRQNRD 1070 M N R +LRG E+ FDL A T QWA L++ LE A +G+ L +KLV AGAEIG A+HAAV GGH + LLE+GA A+ +G TPL AD+N G E SA+ LH A + E +DV AA T + LL AG QG EVVD LLR GADET + G AAD +G V EED++ E+ + VR+LLANAPADRAWRRR VL RA PD+M+ + D Sbjct: 1 MANECARGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIGTAVHAAVRGGHCDITEFLLESGASASAS--DEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIP-EEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSD 357
BLAST of mRNA_L-elsbetiae_contig9885.18823.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 109 bits (273), Expect = 8.390e-22 Identity = 161/421 (38.24%), Postives = 198/421 (47.03%), Query Frame = 3 Query: 18 RRESLRGAEDDTFDLLAVVLTSAQWAELLKAPLECAVRQGNRGLAQKLVRAGAEIGGALHAAVWGGHEGVVSDLLENGAPIEANHVSGDGDTPLHLAALMNATKMVQLLLLKGAAKDAKDMQYRTPLYVAALGGHAATALALMAAGADVNLPCGASERSAVXXXXXXXXXXXXXXXXXXXXXXXDLAICEETPLHFAAIYD-TEVIDVXXXXXXXXXXXXXXXXXXXXDAA-GNTSLEAVLALLXXXXXXXXXXXXXXXXXXXXXXMAGTQGAAEVVDSLLRSGADETILNHRGEAAADLVGKLVVEEDQLAAEDADRVRQLLANAPADRAWRRRGYFVLRRA--HPDRMRQNRDISNARDGAARRARSSAKLGRTETSGCNETAGGSMVDGRAGGDW-------------GIFRSIVGYL 1229 RR+ LRGA DL++ T +WA LK PLE AVR G+R LA LVR GAE G A++ A+ G V+S LL+NGA + A G + + RS XXXXXXXXXXXXXXXXXXXXX LH A ++ + + V A+ S+E+ + XXXXXXXXXXXXXXXXXXX AG QG+AE+VD LLR GADET + G+ AD VG + D L + V +LLANAPADRAWRRRG VL RA R+RQ D + R G +RR RS AKL R++ G G +G G +W GIFRS+VG+L Sbjct: 5 RRKPLRGAALRVLDLVSAASTPEEWAAWLKVPLEIAVRTGDRDLASMLVRGGAEAGTAVNEAIACGDTEVMSLLLDNGASVSATDAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLREWYDGAHRSXXXXXXXXXXXXXXXXXXXXXXXVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQE-DGGDTRGGLSRRTRSRAKLARSDAVGAGCRRG--TPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422
BLAST of mRNA_L-elsbetiae_contig9885.18823.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 109 bits (272), Expect = 2.050e-21 Identity = 105/313 (33.55%), Postives = 130/313 (41.53%), Query Frame = 3 Query: 189 ALHAAVWGGH--EGVVSDLLENGAPIEANHVSGDGDTPLHLAALMNATKMVQLLLLKGAAKDAKDMQYRTPLYVAALGGHAATALALMAAGADVNLPCGASERS-AVXXXXXXXXXXXXXXXXXXXXXXXDLAICEETPLHFAAIYD-TEVIDVXXXXXXXXXXXXXXXXXXXXDAAGNTSLEAVLALLXXXXXXXXXXXXXXXXXXXXXXMAGTQGAAEVVDSLLRSGADETILNHRGEAAADLVGKLV-VEEDQLAAEDADRVRQLLANAPADRAWRRRGYFVLRRAHPDRMRQNRDISNARDGAARRARS 1112 AL AV GH E V +L S D LH++A V LL +GA K+ D Q RTPL++A GH +T AL+AA D ++ RS +V + T LH AA+ + IDV DA N EA LAL AG QG +VD LLR GADET LN G AA++VG + L +D +RVR LL NAPADRAWRRRG VL RA + R+ R S++ G RA S Sbjct: 53 ALKEAVDSGHVDESAVKPILVMAKVASLLSESVDSSDQLHVSASQGQEVRVATLLAEGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVHYRIWNRSYSVLDFAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSSARGIGPRAMS 365
BLAST of mRNA_L-elsbetiae_contig9885.18823.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 108 bits (270), Expect = 2.680e-21 Identity = 104/313 (33.23%), Postives = 128/313 (40.89%), Query Frame = 3 Query: 189 ALHAAVWGGH--EGVVSDLLENGAPIEANHVSGDGDTPLHLAALMNATKMVQLLLLKGAAKDAKDMQYRTPLYVAALGGHAATALALMAAGADVNLPCGASERS-AVXXXXXXXXXXXXXXXXXXXXXXXDLAICEETPLHFAAIYD-TEVIDVXXXXXXXXXXXXXXXXXXXXDAAGNTSLEAVLALLXXXXXXXXXXXXXXXXXXXXXXMAGTQGAAEVVDSLLRSGADETILNHRGEAAADLVGKLV-VEEDQLAAEDADRVRQLLANAPADRAWRRRGYFVLRRAHPDRMRQNRDISNARDGAARRARS 1112 AL AV GH E V +L + S D LH+AA V LL GA K+ D Q RTPL++A GH +T AL+AA D ++ RS +V + T LH AA+ + IDV DA N EA LAL AG QG +VD LLR GADET LN G AA++VG + L +D +RVR LL NAP DRAWRRRG+ VL RA + R+ R S+ R RS Sbjct: 4 ALEEAVDSGHVDESAVEPILVVAKVASLQYASVDSSDQLHVAASQGQEGRVATLLAGGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVRYRIWNRSYSVLDLAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASSNASSNGPRVRS 316
BLAST of mRNA_L-elsbetiae_contig9885.18823.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 108 bits (270), Expect = 1.400e-20 Identity = 148/390 (37.95%), Postives = 179/390 (45.90%), Query Frame = 3 Query: 111 PLECAVRQGNRGLAQKLVRAGA--------EIGGALHAAVWGGHEGVVSDLLENGAPIEANHVSGDGDTPLHLAALMNATKMVQLLLLKGAAKDAKDMQYRTPLYVAALGGHAATALALMAAGADVNLPCGASERSAVXXXXXXXXXXXXXXXXXXXXXXXDLAICEETPLHFAAIYD-TEVIDVXXXXXXXXXXXXXXXXXXXXDAAGNTSLEAVLALLXXXXXXXXXXXXXXXXXXXXXXMAGTQGAAEVVDSLLRSGADETILNHRGEAAADLVGKLVVEEDQLAAEDADRVRQLLANAPADRAWRRRGYFVLRRAH--PDRMRQNRDISNA-RDGAARRARSSAKLGRTET--SGCNETAGGSMVDGRA-GGDWG--IFRSIVGYL 1229 PL+ A +GN Q L+ AGA E AL AV G+ VV +E+ I+ N DG T LH A +M G TPL++ A+ G AA A AL+ AGADV L S+ XXXXXXXXXXXXXXXXX T L A+ +D IDV A+ L A +ALL AG+ G AE+VD LLR GADET ++ G AAD+V E D LA ED DRVR+LLA APADRAWRRRG+ +L RAH R++ S A G A+R RSS + R E +G G VD + GD IF IVGYL Sbjct: 410 PLQMAAGEGNVAATQALLDAGADASSQSEGEASSALDCAVCQGYTDVVRVKIEH--EIDVNISDVDGKTALHHAVAAGKVEM-------GC----------TPLHLVAMAGRAAAAQALLDAGADVALRQNGVGLSSXXXXXXXXXXXXXXXXXXHGGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQANGSTPLHV-ASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLA-EDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEIDWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 778
BLAST of mRNA_L-elsbetiae_contig9885.18823.1 vs. uniprot
Match: D8LL12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL12_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 2.650e-18 Identity = 54/100 (54.00%), Postives = 69/100 (69.00%), Query Frame = 3 Query: 9 NMDRRESLRGAEDDTFDLLAVVLTSAQWAELLKAPLECAVRQGNRGLAQKLVRAGAEIGGALHAAVWGGHEGVVSDLLENGAPIEANHVSGDGDTPLHLA 308 N R +L+GAE +TFDL + VLT+ WAE+L+ PLECA QGN L QKL+RAGA++G ALHAAV GH VV++LLE+GA + G TPL +A Sbjct: 19 NEQGRRALKGAEGETFDLFSEVLTTHGWAEMLQFPLECAAAQGNVALTQKLLRAGADMGSALHAAVRYGHAEVVTNLLEHGACVSIKDTRGS--TPLQVA 116
BLAST of mRNA_L-elsbetiae_contig9885.18823.1 vs. uniprot
Match: D8LRS0_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS0_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 1.720e-15 Identity = 170/453 (37.53%), Postives = 209/453 (46.14%), Query Frame = 3 Query: 18 RRESLRGAEDDTFDLLAVVLTSAQWAELLKAPLECAVRQGNRGLAQKLVRAGAEIGGA----------LHAAVWGGHEGVVSDLLENGAPIEANHVSGDGDTPL--------HLAALMNATKMVQLLLLKGAAKDAKDMQYRTPLYVAALGGHAATALALMAAGADVNLPCGASERSAVXXXXXXXXXXXXXXXXXXXXXXXDLAICEETPLHFAAIYDTE-VIDVXXXXXXXXXXXXXXXXXXXXDAAGNTSLEAVLALLXXXXXXXXXXXXXXXXXXXXXXMAGTQGAAEVVDSLLRSGADETILNHRGEAAADLVGKLVVEEDQLAAEDAD--RVRQLLANAPADRAWRRRGYFVLRRAHPDRMRQNRDISNARDGAARRARS----SAKLGRTETSGCNETAGGSM-----------VDGRAGGDWG-------------IFRSIVGYL 1229 +R L+G E + + L++ T QW E L+ PLE A +GN L L+ AGA+ G A + AA GG E VVS LL GA + N VS H A ++V LLL+GA DA+D TPL A GH + L+AAGADV++ SA+ XXXXXXXXXXXXXXXXX TPLH AA D ID XXXXXXXXXXXXXXXXXXXX XXXXXXXX +G VD LLR + D++ + E D +A+ RVR LLA APA+RAWR R + V+ R+ R N D + D + AR K R E E+AGG + V+ RAGG W +FRSIVG+L Sbjct: 6 KRRLLQGMESEIWKLVSYGATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGAD-GSAGWRGCLDRTLIDAAALGGSEPVVSALLRAGAQPDVNTVSISSKRSALYTATVCGHEHAARGLDRIVSALLLRGAYTDAQDTSGATPLIYACGSGHLSVVNTLLAAGADVDIIRDVDSYSALDKAVCXXXXXXXXXXXXXXXXXNACDDAGFTPLHLAAQKDQPGAIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDTDGNTPLHRACYWR-DKGMEATVDLLLRXXXXXXXXXXXXQTPVDMLDEHDDENDGTTCSEAEFERVRLLLARAPANRAWRHRCWLVMLRSCAKTARANSDATGDADEDSNDARDRKVGKCKGARREN---GESAGGGVRSRMNGAGEGGVERRAGG-WASVVASVIGLGPEEVFRSIVGFL 452
BLAST of mRNA_L-elsbetiae_contig9885.18823.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 6.060e-15 Identity = 49/81 (60.49%), Postives = 55/81 (67.90%), Query Frame = 3 Query: 810 MAGTQGAAEVVDSLLRSGADETILNHRGEAAADLVGKLVVEEDQLAAEDADRVRQLLANAPADRAWRRRGYFVLRRAHPDR 1052 +AG +G EVVDSLLRSGADETIL+ G AA D++ V L+ E DRVR LL NA ADRAW RR Y VL R HPDR Sbjct: 94 VAGFEGDTEVVDSLLRSGADETILDSEGRAAVDMISWEVAGL-HLSGEQDDRVRDLLVNAQADRAWHRRRYLVLCRTHPDR 173
BLAST of mRNA_L-elsbetiae_contig9885.18823.1 vs. uniprot
Match: A0A6H5JFR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR1_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 1.180e-14 Identity = 112/318 (35.22%), Postives = 148/318 (46.54%), Query Frame = 3 Query: 180 IGGALHAAVWGGHEGVVSDLLENGAPIEANHVSGDGDTPLHLAALMNATKMVQLLLLKGAAKDAKDMQYRTPLYVAALGGHAATALALMAAGADVNLPCGASERSAVXXXXXXXXXXXXXXXXXXXXXXXDLAICEETPLHFAAIYDTEVIDVXXXXXXXXXXXXXXXXXXXXDAAGNTSLEAVLALLXXXXXXXXXXXXXXXXXXXXXXMAGTQGAAEVVDSLLRSGADETILNHRGEAAADLVGKLVVEEDQLAAEDADRVRQLLANAPADRAWRRRGYFVLRRAHPDRMRQNRDISNARDGAARRARSSAKLGRT 1133 +G ALHAAV G+ VV++LLE+GA + G TPL +AA TPL+ A L GH +A ALMAAGA++N+ CG S+R+ + + + LH XXXXXXXXXXXXXXXXXXXX + + L + + VVD LLR GA ETI++ R + AA L+ K L DA+RV +LL NAPADRAWRRRG+ +L RA+P+R+ D S+ AAR + AK+ R+ Sbjct: 1 MGSALHAAVRYGYAEVVTNLLEHGACVSIKDARGS--TPLQVAAEC------------------------TPLFGALLFGHLTSARALMAAGAEINVRCGLSKRTVLSLAAEKGDVDILRALVKNGADVTAVDNDRDMALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQAVVALSKR----------------------ARRTSAVVDLLLRLGAHETIVDKRKKNAAGLLKKSWW--SCLYPGDAERVYKLLRNAPADRAWRRRGFLLLCRAYPERVPPRLDSSSTLVDAARTTHNEAKVPRS 268 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9885.18823.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9885.18823.1 >prot_L-elsbetiae_contig9885.18823.1 ID=prot_L-elsbetiae_contig9885.18823.1|Name=mRNA_L-elsbetiae_contig9885.18823.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=410bp MENMDRRESLRGAEDDTFDLLAVVLTSAQWAELLKAPLECAVRQGNRGLAback to top mRNA from alignment at L-elsbetiae_contig9885:2151..6028- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9885.18823.1 ID=mRNA_L-elsbetiae_contig9885.18823.1|Name=mRNA_L-elsbetiae_contig9885.18823.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3878bp|location=Sequence derived from alignment at L-elsbetiae_contig9885:2151..6028- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9885:2151..6028- >mRNA_L-elsbetiae_contig9885.18823.1 ID=mRNA_L-elsbetiae_contig9885.18823.1|Name=mRNA_L-elsbetiae_contig9885.18823.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2460bp|location=Sequence derived from alignment at L-elsbetiae_contig9885:2151..6028- (Laminarionema elsbetiae ELsaHSoW15)back to top |