mRNA_L-elsbetiae_contig9866.18807.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9866.18807.1 vs. uniprot
Match: D7G621_ECTSI (Histidine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G621_ECTSI) HSP 1 Score: 266 bits (681), Expect = 1.710e-84 Identity = 130/137 (94.89%), Postives = 132/137 (96.35%), Query Frame = 2 Query: 2 LFGHWREVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVTGVAAEAELLGAMVAFFGRVGLGPEDVGI 412 LFGHWR VASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFS+PQCWRYERMTRGRRREHYQWNMDIWGV+GVAAEAELLGAMV FF RVGL EDVGI Sbjct: 161 LFGHWRGVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVSGVAAEAELLGAMVTFFERVGLRAEDVGI 297
BLAST of mRNA_L-elsbetiae_contig9866.18807.1 vs. uniprot
Match: A0A7S2KC09_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KC09_9STRA) HSP 1 Score: 233 bits (593), Expect = 1.820e-75 Identity = 110/137 (80.29%), Postives = 121/137 (88.32%), Query Frame = 2 Query: 2 LFGHWREVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVTGVAAEAELLGAMVAFFGRVGLGPEDVGI 412 LF WREVA++FGF EYD+PVLE+ESLYTRK+GEEVTQQLY FEDKGGRRVSLRPEMTPSLARMVM+K+ L +P+KWFSLPQCWRYERMTRGRRREHYQWNMD+WGV G+ AEAELL AMV FF VGL DVGI Sbjct: 95 LFTEWREVAATFGFSEYDSPVLENESLYTRKAGEEVTQQLYSFEDKGGRRVSLRPEMTPSLARMVMSKKGGLPMPLKWFSLPQCWRYERMTRGRRREHYQWNMDVWGVPGIEAEAELLSAMVTFFENVGLNSRDVGI 231
BLAST of mRNA_L-elsbetiae_contig9866.18807.1 vs. uniprot
Match: A0A835Z4P1_9STRA (Histidine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4P1_9STRA) HSP 1 Score: 233 bits (595), Expect = 3.090e-73 Identity = 110/137 (80.29%), Postives = 122/137 (89.05%), Query Frame = 2 Query: 2 LFGHWREVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVTGVAAEAELLGAMVAFFGRVGLGPEDVGI 412 LFGHWR+VA +GFEEYDAPVLESE+LY RKSGEEVTQQLY FEDKG RRV+LRPEMTPSLARM+MA+R +TLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGV GV AEAELL A+V+FF +G+ DVG+ Sbjct: 23 LFGHWRKVAEQYGFEEYDAPVLESEALYVRKSGEEVTQQLYNFEDKGERRVALRPEMTPSLARMIMARRNGVTLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVQGVEAEAELLAAVVSFFTNIGITSADVGM 159
BLAST of mRNA_L-elsbetiae_contig9866.18807.1 vs. uniprot
Match: L1K527_GUITC (Histidine--tRNA ligase n=2 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K527_GUITC) HSP 1 Score: 234 bits (598), Expect = 8.160e-73 Identity = 113/137 (82.48%), Postives = 122/137 (89.05%), Query Frame = 2 Query: 2 LFGHWREVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVTGVAAEAELLGAMVAFFGRVGLGPEDVGI 412 LFGHW++VA GFEEYDAPVLESE LY RK+GEEVTQQLY FEDKG RRVSLRPEMTPSLARMVMA+ KSLTLPVKWFS+PQCWRYERMTRGRRREHYQWNMDIWGV G+ AEAELL A+V FF RVG+ +DVGI Sbjct: 99 LFGHWKDVARLHGFEEYDAPVLESEELYIRKAGEEVTQQLYNFEDKGERRVSLRPEMTPSLARMVMARGKSLTLPVKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVPGIEAEAELLSAIVTFFKRVGITSQDVGI 235
BLAST of mRNA_L-elsbetiae_contig9866.18807.1 vs. uniprot
Match: A0A6V2QQD5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2QQD5_9STRA) HSP 1 Score: 223 bits (569), Expect = 4.280e-71 Identity = 107/137 (78.10%), Postives = 118/137 (86.13%), Query Frame = 2 Query: 2 LFGHWREVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVTGVAAEAELLGAMVAFFGRVGLGPEDVGI 412 LF HWR VAS++GF EYDAPVLESE+LYTRK+GEEVTQQLY F DKG R V+LRPEMTPSLARMVMAK+ L LP+KW S+PQCWRYERMTRGRRREH+QWNMD+WGV GV AEAELL AMV FF VGL +DVGI Sbjct: 105 LFDHWRSVASTYGFSEYDAPVLESEALYTRKAGEEVTQQLYNFMDKGDRAVALRPEMTPSLARMVMAKKGGLNLPLKWHSIPQCWRYERMTRGRRREHFQWNMDVWGVQGVEAEAELLSAMVTFFENVGLTSDDVGI 241
BLAST of mRNA_L-elsbetiae_contig9866.18807.1 vs. uniprot
Match: A0A4D9CRF8_9STRA (Histidine--tRNA ligase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRF8_9STRA) HSP 1 Score: 228 bits (580), Expect = 5.410e-71 Identity = 109/137 (79.56%), Postives = 118/137 (86.13%), Query Frame = 2 Query: 2 LFGHWREVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVTGVAAEAELLGAMVAFFGRVGLGPEDVGI 412 LFG WR+VA FEEYDAPVLESE L+ RK+GEEVT+QLY FEDKGGRRV+LRPEMTPSLARMVMAKR L +PVKWFS PQCWRYERMTRGRRREHYQWNMD+WGV+GV AEAELL A+ FF RVGL EDVGI Sbjct: 7 LFGLWRQVARDHAFEEYDAPVLESEDLFVRKAGEEVTEQLYNFEDKGGRRVALRPEMTPSLARMVMAKRNGLVMPVKWFSFPQCWRYERMTRGRRREHYQWNMDVWGVSGVEAEAELLSAITTFFKRVGLTAEDVGI 143
BLAST of mRNA_L-elsbetiae_contig9866.18807.1 vs. uniprot
Match: A0A6U3ZLG2_9STRA (Histidine--tRNA ligase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3ZLG2_9STRA) HSP 1 Score: 229 bits (585), Expect = 8.610e-71 Identity = 109/137 (79.56%), Postives = 121/137 (88.32%), Query Frame = 2 Query: 2 LFGHWREVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVTGVAAEAELLGAMVAFFGRVGLGPEDVGI 412 LF WR+VA+++GF EYDAPVLESESLYTRK+GEEVTQQLY FEDKGGR V+LRPEMTPSLARMVMAK+ L LP+KW+S+PQCWRYERMTRGRRREHYQWNMDIWGV G+ AEAELL AMV FF VGL +DVGI Sbjct: 106 LFNQWRQVAATYGFSEYDAPVLESESLYTRKAGEEVTQQLYNFEDKGGRNVALRPEMTPSLARMVMAKKGGLPLPLKWYSIPQCWRYERMTRGRRREHYQWNMDIWGVDGIEAEAELLSAMVMFFKNVGLTADDVGI 242
BLAST of mRNA_L-elsbetiae_contig9866.18807.1 vs. uniprot
Match: A0A7S2S5G9_9STRA (Histidine--tRNA ligase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5G9_9STRA) HSP 1 Score: 228 bits (582), Expect = 3.490e-70 Identity = 109/137 (79.56%), Postives = 121/137 (88.32%), Query Frame = 2 Query: 2 LFGHWREVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVTGVAAEAELLGAMVAFFGRVGLGPEDVGI 412 LFG WREVAS+FGF EYDAPVLESE+LYTRK+GEEVT+QLYCFEDKGGRRV+LRPEMTPSLAR+VM +P+KWFS+PQCWRYERMTRGRRREHYQWNMDIWGV+GV AEAELL AMV FF +GL +DVGI Sbjct: 119 LFGQWREVASAFGFSEYDAPVLESEALYTRKAGEEVTEQLYCFEDKGGRRVALRPEMTPSLARIVMKDHP--LMPIKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVSGVQAEAELLRAMVTFFTNIGLTSDDVGI 253
BLAST of mRNA_L-elsbetiae_contig9866.18807.1 vs. uniprot
Match: B8C1W7_THAPS (Histidine--tRNA ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1W7_THAPS) HSP 1 Score: 226 bits (577), Expect = 1.140e-69 Identity = 111/137 (81.02%), Postives = 118/137 (86.13%), Query Frame = 2 Query: 2 LFGHWREVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVTGVAAEAELLGAMVAFFGRVGLGPEDVGI 412 LF WR VAS +GF EYDAPVLESESLYTRK+GEEVTQQLY F DKG R V+LRPEMTPSLARMVMAK+ L LP+KWFS+PQCWRYERMTRGRRREHYQWNMDIWGV G+ AEAELL AMV FF RVGL EDVGI Sbjct: 101 LFSQWRIVASLYGFSEYDAPVLESESLYTRKAGEEVTQQLYNFVDKGDRNVALRPEMTPSLARMVMAKKGGLPLPLKWFSIPQCWRYERMTRGRRREHYQWNMDIWGVDGIEAEAELLSAMVMFFKRVGLTSEDVGI 237
BLAST of mRNA_L-elsbetiae_contig9866.18807.1 vs. uniprot
Match: F0YFS7_AURAN (Histidine--tRNA ligase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFS7_AURAN) HSP 1 Score: 226 bits (575), Expect = 1.310e-69 Identity = 107/137 (78.10%), Postives = 120/137 (87.59%), Query Frame = 2 Query: 2 LFGHWREVASSFGFEEYDAPVLESESLYTRKSGEEVTQQLYCFEDKGGRRVSLRPEMTPSLARMVMAKRKSLTLPVKWFSLPQCWRYERMTRGRRREHYQWNMDIWGVTGVAAEAELLGAMVAFFGRVGLGPEDVGI 412 LFG WR A++ GFEEYD+PVLESE+LY RK+GEEVTQQLY FEDKGGRRV+LRPEMTPSLARMVMA++ +L LPVKWFS+PQCWRYER TRGRRREHYQWNMDIWGV GV AEAE+L A+V FF RVG+ DVGI Sbjct: 68 LFGQWRATAAAHGFEEYDSPVLESEALYVRKAGEEVTQQLYNFEDKGGRRVALRPEMTPSLARMVMARKNALPLPVKWFSVPQCWRYERTTRGRRREHYQWNMDIWGVPGVTAEAEVLAAVVGFFERVGIDSADVGI 204 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9866.18807.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9866.18807.1 >prot_L-elsbetiae_contig9866.18807.1 ID=prot_L-elsbetiae_contig9866.18807.1|Name=mRNA_L-elsbetiae_contig9866.18807.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=138bp VVRALARSRVVFRLRGVRRTGAGERVSVHAEVWRGGDAAALLLRGQGGATback to top mRNA from alignment at L-elsbetiae_contig9866:3104..5480- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9866.18807.1 ID=mRNA_L-elsbetiae_contig9866.18807.1|Name=mRNA_L-elsbetiae_contig9866.18807.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2377bp|location=Sequence derived from alignment at L-elsbetiae_contig9866:3104..5480- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9866:3104..5480- >mRNA_L-elsbetiae_contig9866.18807.1 ID=mRNA_L-elsbetiae_contig9866.18807.1|Name=mRNA_L-elsbetiae_contig9866.18807.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=828bp|location=Sequence derived from alignment at L-elsbetiae_contig9866:3104..5480- (Laminarionema elsbetiae ELsaHSoW15)back to top |