mRNA_L-elsbetiae_contig9852.18796.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9852.18796.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 166 bits (419), Expect = 1.480e-41 Identity = 94/153 (61.44%), Postives = 108/153 (70.59%), Query Frame = 1 Query: 10 RCLDAFNTALSHACDGGDTRWYASTLELQLASLELCRACRRVPTLHVRVDENTPRSLWSPRKSQTRPITRSSKVRIWSRVPVVRALSLTWALPLEVLHQRAAVELWTWLELLRLRRGPSSLRGRKS-VVWPSKRLKDLVLEMEIDQTIAGVVW 465 RCLDAF ALS AC+GG+ RWYASTLELQL SL+LCRACR LHV VD+ TPRSLWS R +QTRP TRS + I SRVPVVRAL LTWAL +E L ++AA+ELWTW E L L G S + S VVWP + L LVL + D + G VW Sbjct: 10 RCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELL-GSSCVSSLGSEVVWP-RGLTQLVLYTDSDIAM-GTVW 159
BLAST of mRNA_L-elsbetiae_contig9852.18796.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 151 bits (382), Expect = 1.660e-40 Identity = 85/145 (58.62%), Postives = 97/145 (66.90%), Query Frame = 1 Query: 1 GGNRCLDAFNTALSHACDGGDTRWYASTLELQLASLELCRACRRVPTLHVRVDENTPRSLWSPRKSQTRPITRSSKVRIWSRVPVVRALSLTWALPLEVLHQRAAVELWTWLELLRLRRGPSSLRGRKSVVWPSKRLKDLVLEME 435 G R DAF ALS AC+GG+ RWY ST ELQL SL++CRACR PTLHVRV TP SLWSP Q P T+SSKVR+ SRVPVVRAL LTWA +E L QRAA+ELW+ E L + GP SVVWP L LVL+ + Sbjct: 5 GYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMV-GPLCAASLGSVVWPLG-LTQLVLDTD 147
BLAST of mRNA_L-elsbetiae_contig9852.18796.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 163 bits (412), Expect = 3.490e-40 Identity = 94/169 (55.62%), Postives = 111/169 (65.68%), Query Frame = 1 Query: 1 GGNRCLDAFNTALSHACDGGDTRWYASTLELQLASLELCRACRRVPTLHVRVDENTPRSLWSPRKSQTRPITRSSKVRIWSRVPVVRALSLTWALPLEVLHQRAAVELWTWLELLRLRRGPSSLRGRKSVVWPSKRLKDLVLEMEIDQTIAGVVWPASLQQVSFGARFN 507 G ++CLDAF AL+ ACDG + RWY STLELQL SLE+C ACRRV TLHVRV TP SLW P ++ T RS KV I SRVPVV+A LTWALP+ VL QR+A E+ + R SS +S VWP +RLK +V E D T+ WPASLQQ+SFG FN Sbjct: 5 GNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTH-SSAASLESAVWP-QRLKRMVFES--DMTVNTASWPASLQQLSFGCGFN 169
BLAST of mRNA_L-elsbetiae_contig9852.18796.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 152 bits (383), Expect = 4.860e-38 Identity = 88/169 (52.07%), Postives = 108/169 (63.91%), Query Frame = 1 Query: 1 GGNRCLDAFNTALSHACDGGDTRWYASTLELQLASLELCRACRRVPTLHVRVDENTPRSLWSPRKSQTRPITRSSKVRIWSRVPVVRALSLTWALPLEVLHQRAAVELWTWLELLRLRRGPSSLRGRKSVVWPSKRLKDLVLEMEIDQTIAGVVWPASLQQVSFGARFN 507 G + CL AF AL+ C+G + RWYASTLELQL SLE C ACRRVPTLHVRVD TPRSLWSP KS RS + + +RVP V+A LTWAL +EVL Q +AVEL + + R+ G SS S+ W LK LV + ++ + A WPASL Q+ FG RF+ Sbjct: 13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVS-GNSSTASLGSMFWLQMMLKRLVFDSDMPASTAS--WPASLPQLLFGDRFD 178
BLAST of mRNA_L-elsbetiae_contig9852.18796.1 vs. uniprot
Match: A0A6H5KXX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE) HSP 1 Score: 141 bits (355), Expect = 3.510e-33 Identity = 92/181 (50.83%), Postives = 103/181 (56.91%), Query Frame = 1 Query: 1 GGNRCLDAFNTALSHACDGGDTRWYASTLELQLASLELCRACRRVPTLHVRVDENTPRSLWSPRKSQTRPITRSSKVR----------------------------IWSRVPVVRALSLTWALPLEVLHQRAAVELWTWLELLRLRRG--PSSLRGRKSVVWPSKRLKDLVLEMEIDQTIA 453 G +R DA A+S A +G RWY STLEL+LASLE CRACRRVPT+HVRVD NTP SLWSP TR TRSSK R I SRVPV +AL LTWALP E+L Q AVELWT LE L+LR PS L SV WP + LK L LE + I+ Sbjct: 5 GASRGFDALIIAISQAYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPHAMPTRAHTRSSKTRAXXXXXXXXXXXXXXXXXXXXXXXXKARISSRVPVGQALGLTWALPTEILLQGVAVELWTKLEFLQLRESLSPSDL---VSVAWP-QNLKRLALETGFEAAIS 181
BLAST of mRNA_L-elsbetiae_contig9852.18796.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 124 bits (310), Expect = 3.970e-29 Identity = 76/141 (53.90%), Postives = 88/141 (62.41%), Query Frame = 1 Query: 1 GGNRCLDAFNTALSHACDGGDTRWYASTLELQLASLELCRACRRVPTLHVRVDENTPRSLWSPRKSQTRPITRSSKVRIWSRVPVVRALSLTWALPLEVLHQRAAVELWTWLELLRLRRGPSSLRGRKSVVWPSKRLKDLV 423 GG LD AL+ ACDG + RWY STLELQL SLELC ACR LHV V E+TP +LWS R S+T P RS +V +RVP V+AL TWALP++ L QRAA E E RL+ G S +SVVWP LK LV Sbjct: 85 GGGSSLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTER-RLQDGHSFAASVESVVWPES-LKRLV 223
BLAST of mRNA_L-elsbetiae_contig9852.18796.1 vs. uniprot
Match: A0A6H5JL88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL88_9PHAE) HSP 1 Score: 123 bits (309), Expect = 1.300e-27 Identity = 73/154 (47.40%), Postives = 93/154 (60.39%), Query Frame = 1 Query: 61 DTRWYASTLELQLASLELCRACRRVPTLHVRVDENTPRSLWSPRKSQTRPITRSSKVRIW-----SRVPVVRALSLTWALPLEVLHQRAAVELWTWLELLRLRRGPSSLRGRKSVVWPSKRLKDLVLEMEIDQTIAGVVWPASLQQVSFGARFN 507 + RW+ STL +QLASLE CRA R +PT+ + VD PRSLW RKSQT TR ++R W SRVP++RA L W L +E L Q AVELWT L+ L L G S S+V P +RL+ L + ++ V WPA LQ++SFG FN Sbjct: 2 NNRWFTSTLNIQLASLEFCRASRSIPTIALHVDSRIPRSLWDGRKSQTPSSTRGLEIRCWKARPLSRVPLIRASRLNWGLSMETLLQSTAVELWTGLKSLHLC-GDVSDASPASMVQP-QRLEQLEGNKDARDSVEAVPWPAFLQKLSFGFPFN 153
BLAST of mRNA_L-elsbetiae_contig9852.18796.1 vs. uniprot
Match: A0A6H5K2L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L2_9PHAE) HSP 1 Score: 120 bits (301), Expect = 3.060e-27 Identity = 81/169 (47.93%), Postives = 96/169 (56.80%), Query Frame = 1 Query: 1 GGNRCLDAFNTALSHACDGGDTRWYASTLELQLASLELCRACRRVPTLHVRVDENTPRSLWSPRKSQTRPITRSSKVRIWSRVPVVRALSLTWALPLEVLHQRAAVELWTWLELLRLRRGPSSLRGRKSVVWPSKRLKDLVLEMEIDQTIAGVVWPASLQQVSFGARFN 507 G C+DAF AL+ CDGG+ RWYASTLELQ SLE C ACRRVPT H +T L S SR PVVRA SLTWAL ++VL Q A+EL + R G SS S++W +RLK LVLE+ D + WPASLQQ+SFG +FN Sbjct: 15 GRGECVDAFIVALNRTCDGGEQRWYASTLELQPVSLEFCVACRRVPTSH---STSTVGRLVSG----------------VSRAPVVRAYSLTWALSMDVLLQSCAMELQRGSKYRRSG-GHSSAANLASMLW-LQRLKRLVLEL--DTPVITASWPASLQQLSFGYKFN 160
BLAST of mRNA_L-elsbetiae_contig9852.18796.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 124 bits (310), Expect = 5.890e-27 Identity = 78/169 (46.15%), Postives = 95/169 (56.21%), Query Frame = 1 Query: 1 GGNRCLDAFNTALSHACDGGDTRWYASTLELQLASLELCRACRRVPTLHVRVDENTPRSLWSPRKSQTRPITRSSKVRIWSRVPVVRALSLTWALPLEVLHQRAAVELWTWLELLRLRRGPSSLRGRKSVVWPSKRLKDLVLEMEIDQTIAGVVWPASLQQVSFGARFN 507 G + CLDAF AL A DG RWY STLELQL SLE C ACR + V++ TP SLWSPRKS RS + I SRVP V+A WALP+E+L R+A EL E R GPSS + W K + L ++++ V WPA LQ++SFG FN Sbjct: 25 GRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSEN-RQPTGPSSATSPGRMGWFQKLTR---LMFYSERSVNSVSWPACLQELSFGDFFN 189
BLAST of mRNA_L-elsbetiae_contig9852.18796.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 120 bits (300), Expect = 3.870e-26 Identity = 76/167 (45.51%), Postives = 100/167 (59.88%), Query Frame = 1 Query: 10 RCLDAFNTALSHACDGGDTRWYASTLELQLASLELCRACRRVPTLHVRVDENTPRSLWSPRKSQTRPITRSSKVRIWSRVPVVRALSLTWALPLEVLHQRAAVELWTWLELLRLRRGPSSLRGRKSVVWPSKRLKDLVLEMEIDQT-IAGVVWPASLQQVSFGARFN 507 RCLDAF ALS +GG+ RWY STL+LQLASLE C ACR P LHV VD TP +LWS Q P +S +RVP V+A+ LTWA P E A+ ELWT LE L+L+ + SVVWP + L+ LV++ + + + WP+SL+ ++F F+ Sbjct: 8 RCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWS--LGQANPTAGTS-----TRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTA-NLDSVVWP-QGLQRLVMDCTVFIIPLEMMSWPSSLKSLTFAGIFD 165 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9852.18796.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9852.18796.1 >prot_L-elsbetiae_contig9852.18796.1 ID=prot_L-elsbetiae_contig9852.18796.1|Name=mRNA_L-elsbetiae_contig9852.18796.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=450bp GGNRCLDAFNTALSHACDGGDTRWYASTLELQLASLELCRACRRVPTLHVback to top mRNA from alignment at L-elsbetiae_contig9852:4626..5975- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9852.18796.1 ID=mRNA_L-elsbetiae_contig9852.18796.1|Name=mRNA_L-elsbetiae_contig9852.18796.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1350bp|location=Sequence derived from alignment at L-elsbetiae_contig9852:4626..5975- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9852:4626..5975- >mRNA_L-elsbetiae_contig9852.18796.1 ID=mRNA_L-elsbetiae_contig9852.18796.1|Name=mRNA_L-elsbetiae_contig9852.18796.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2700bp|location=Sequence derived from alignment at L-elsbetiae_contig9852:4626..5975- (Laminarionema elsbetiae ELsaHSoW15)back to top |