mRNA_L-elsbetiae_contig980.18756.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Match: D7FPR2_ECTSI (NADH dehydrogenase (Ubiquinone) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPR2_ECTSI) HSP 1 Score: 242 bits (617), Expect = 6.330e-81 Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 1 Query: 1 MASGLGNYMMKSVGPSRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSAHNDARAVKDTFVDKFMAGTS 369 MASGLGNYMMKSVGPSRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSAHNDARAVKD F+DKFMAGTS Sbjct: 1 MASGLGNYMMKSVGPSRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSAHNDARAVKDDFMDKFMAGTS 123
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Match: A0A7S2XV13_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV13_9STRA) HSP 1 Score: 115 bits (288), Expect = 7.190e-31 Identity = 55/101 (54.46%), Postives = 72/101 (71.29%), Query Frame = 1 Query: 64 SPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSAHNDARAVKDTFVDKFMAGT 366 +P QLYR I KE+PR++ IYDVDM +A AAIA +FR + H+KD RV+D LV KGYM +EE TMQYKQKTHL+ +L+P ++ +TF +KF GT Sbjct: 18 NPVLQLYRKILKELPRVMIIYDVDMPKEEANAAIAYHFRKSAHVKDERVIDLLVAKGYMHVEEATMQYKQKTHLMSILDPWELSEKFKEPETFEEKFYKGT 118
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Match: A0A4D9D5Z3_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5Z3_9STRA) HSP 1 Score: 115 bits (288), Expect = 8.320e-31 Identity = 56/102 (54.90%), Postives = 74/102 (72.55%), Query Frame = 1 Query: 64 SPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSAHNDAR-AVKDTFVDKFMAGT 366 +P QLYR I+KE+PR+LTIYD D+ A+ARA + + FR N HL+DP +VD LV KGYM+LEET MQ+KQKTHLLRLL + K+TF +KF++ + Sbjct: 18 NPVVQLYRTISKELPRVLTIYDADLAPAEARAQVQVLFRKNAHLQDPVIVDMLVKKGYMELEETLMQWKQKTHLLRLLAADTEAPRKYREKNTFTEKFLSNS 119
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Match: A0A835YPN0_9STRA (NADH dehydrogenase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPN0_9STRA) HSP 1 Score: 113 bits (283), Expect = 2.300e-30 Identity = 55/99 (55.56%), Postives = 72/99 (72.73%), Query Frame = 1 Query: 1 MASGLGNYMMKSVGPSRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLL 297 +A GL N + KS G G+ +P LYR+I +E+PR+LTIYDVDMD A AR + FR NGHL+DP V+ +V KGYM+LEET +Q+KQ+THL+RLL Sbjct: 1 VAQGLRNAIFKSGGGFLGGSTAPIMDLYRSICREIPRVLTIYDVDMDPAVARRKVNELFRKNGHLQDPEVIKIVVSKGYMELEETVLQFKQRTHLMRLL 99
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Match: A0A067CET6_SAPPC (Complex1_LYR_dom domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CET6_SAPPC) HSP 1 Score: 105 bits (261), Expect = 9.230e-27 Identity = 52/105 (49.52%), Postives = 71/105 (67.62%), Query Frame = 1 Query: 64 SPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSA--HNDARAVKDTF---VDKFMAG 363 +PA LYR I K+VPR+LT+YD++M+ +AR A+ +FR N +KDPRV+D L+ K M+LEET MQ+KQK+HLL LL+ N+ V D F +D F AG Sbjct: 8 NPAVTLYRHITKQVPRVLTLYDINMEPREARLAVQAFFRKNAEIKDPRVIDMLISKANMELEETLMQWKQKSHLLTLLDSGVKLQNEKNVVYDDFEEGLDNFFAG 112
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Match: K3W7P5_GLOUD (Complex1_LYR_dom domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7P5_GLOUD) HSP 1 Score: 105 bits (262), Expect = 1.050e-26 Identity = 55/108 (50.93%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 58 TASPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSA------HNDARAVKDTFVDKFMAG 363 T+SPA LYR I K+VPR+LT+YD+ M+ A+AR A+ FR + +KDPRVVD L+ K M+LEET MQ+KQK HLL LL A ND + V+D+ + F AG Sbjct: 14 TSSPAVTLYRYITKQVPRVLTLYDISMEPAEARLAVQALFRKHADVKDPRVVDMLITKANMELEETLMQWKQKVHLLTLLESGAALRADKKNDVKTVEDSLAN-FYAG 120
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Match: A0A7S1U9Y6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9Y6_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.190e-26 Identity = 51/97 (52.58%), Postives = 70/97 (72.16%), Query Frame = 1 Query: 61 ASPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSAHNDARAVKDTFVDK 351 A+PA QL+R I K + R+LTIYD+++ A+AR+AIA FRNNGH+KDPR+VD LV KGY+ LEET +Q+KQK HL +LL+ + D ++K Sbjct: 47 AAPARQLFRDICKNLGRVLTIYDLNITTAEARSAIAQRFRNNGHIKDPRIVDVLVAKGYLHLEETLLQHKQKNHLWQLLDNEEGKNFPGAPDDALEK 143
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Match: A0A7S1XWB6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWB6_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.220e-26 Identity = 51/97 (52.58%), Postives = 70/97 (72.16%), Query Frame = 1 Query: 61 ASPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSAHNDARAVKDTFVDK 351 A+PA QL+R I K + R+LTIYD+++ A+AR+AIA FRNNGH+KDPR+VD LV KGY+ LEET +Q+KQK HL +LL+ + D ++K Sbjct: 48 AAPARQLFRDICKNLGRVLTIYDLNITTAEARSAIAQRFRNNGHIKDPRIVDVLVAKGYLHLEETLLQHKQKNHLWQLLDNEEGKNFPGAPDDALEK 144
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Match: A0A1V9YKZ4_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKZ4_9STRA) HSP 1 Score: 103 bits (256), Expect = 6.260e-26 Identity = 52/112 (46.43%), Postives = 75/112 (66.96%), Query Frame = 1 Query: 28 MKSVGPSRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSAHNDARAVKDTFVDKFMAG 363 ++ G GT +PA LYR I K+VPR+LT+YD++M+ +AR A+ +FR N +KDPRV+D L+ K M+LEET MQ+KQK HL+ LL+ A +A KD+ D++ G Sbjct: 3 LRLTGSKLLGT-NPAVTLYRHITKQVPRVLTLYDINMEPREARLAVQAFFRKNAEIKDPRVIDMLISKANMELEETLMQWKQKAHLVTLLDSGAK--LQAEKDSVFDEYEDG 111
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Match: A0A7S3GV22_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GV22_9STRA) HSP 1 Score: 102 bits (255), Expect = 9.130e-26 Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 1 Query: 73 TQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNP 303 +QLYR+I KE+PR+L IYDVDM A+ AI +FR +GHLKD V+ L+ KGYM+LEET MQ+KQKTHLLR+L P Sbjct: 21 SQLYRSIIKELPRVLIIYDVDMPMKTAKTAIQYHFRKHGHLKDGNVIGMLMAKGYMELEETLMQWKQKTHLLRVLEP 97 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig980.18756.1 >prot_L-elsbetiae_contig980.18756.1 ID=prot_L-elsbetiae_contig980.18756.1|Name=mRNA_L-elsbetiae_contig980.18756.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=124bp MASGLGNYMMKSVGPSRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQback to top mRNA from alignment at L-elsbetiae_contig980:22552..25704- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig980.18756.1 ID=mRNA_L-elsbetiae_contig980.18756.1|Name=mRNA_L-elsbetiae_contig980.18756.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3153bp|location=Sequence derived from alignment at L-elsbetiae_contig980:22552..25704- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig980:22552..25704- >mRNA_L-elsbetiae_contig980.18756.1 ID=mRNA_L-elsbetiae_contig980.18756.1|Name=mRNA_L-elsbetiae_contig980.18756.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=744bp|location=Sequence derived from alignment at L-elsbetiae_contig980:22552..25704- (Laminarionema elsbetiae ELsaHSoW15)back to top |