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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 309 |
| Cds size | 279 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817040.2998986-UTR-L-elsbetiae_contig9787:1502..1531 | 1622817040.2998986-UTR-L-elsbetiae_contig9787:1502..1531 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig9787 1503..1531 - |
| 1691684002.1903403-UTR-L-elsbetiae_contig9787:1502..1531 | 1691684002.1903403-UTR-L-elsbetiae_contig9787:1502..1531 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig9787 1503..1531 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817040.31681-CDS-L-elsbetiae_contig9787:1531..1596 | 1622817040.31681-CDS-L-elsbetiae_contig9787:1531..1596 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9787 1532..1596 - |
| 1691684002.2008965-CDS-L-elsbetiae_contig9787:1531..1596 | 1691684002.2008965-CDS-L-elsbetiae_contig9787:1531..1596 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9787 1532..1596 - |
| 1622817040.3272228-CDS-L-elsbetiae_contig9787:3613..3827 | 1622817040.3272228-CDS-L-elsbetiae_contig9787:3613..3827 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9787 3614..3827 - |
| 1691684002.2133555-CDS-L-elsbetiae_contig9787:3613..3827 | 1691684002.2133555-CDS-L-elsbetiae_contig9787:3613..3827 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig9787 3614..3827 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9787.18743.1 >prot_L-elsbetiae_contig9787.18743.1 ID=prot_L-elsbetiae_contig9787.18743.1|Name=mRNA_L-elsbetiae_contig9787.18743.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=93bp
SGTASGSRQTNKRARRSASGGDLHPVRVKRKGGDNEVPDDDNLTACPEPG
DAGVKTEDMELPCEMEPWKAAGRTSAARTKRRKAVAGQAGGP* back to topmRNA from alignment at L-elsbetiae_contig9787:1503..3827- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig9787.18743.1 ID=mRNA_L-elsbetiae_contig9787.18743.1|Name=mRNA_L-elsbetiae_contig9787.18743.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2325bp|location=Sequence derived from alignment at L-elsbetiae_contig9787:1503..3827- (Laminarionema elsbetiae ELsaHSoW15)
AGCGGCACAGCTAGCGGGAGCAGACAGACCAACAAACGAGCCCGCCGGAG
TGCTAGCGGTGGGGACTTGCATCCGGTCCGGGTAAAACGAAAAGGAGGTG
ACAACGAAGTGCCCGACGACGATAATTTGACGGCATGTCCGGAGCCAGGC
GACGCTGGGGTGAAGACGGAGGACATGGAATTGCCTTGCGAGATGGAGCC
GTGGAAAGCTGCAGGTACATTCAAACAAGTATATAAGTAGTTGGTATCTC
GGGGTGCTGTTGTATATGCTGGTCGATGTAGAAGAGACAATGGTTTTTGA
GGCAGATCCAGGTGCAGTCATATGTAGTTGGACGCACAACCGAACAGAAC
TACTGTACAGTGGGCACAACCGCTGCAGCGCCGAGCGGTGAACAGGTACA
GTAGTAACGGCATTGAGATCGGGTTTCGAATTTCATTGCCGTCAATCACA
CAAGATACCATGTCCCTGGTGGATACATTTGAGCGCCTGGTTATATTTTC
ACCGGGGGTGGTATTTTGTGGGTGGGGTGGTACCTATTCTGGCACGGGTG
ATAAAGTGCATTGTGTTGTGGGGGCCGTCAAAGGGGGGGGGTAACGGCGG
GGTGTTATTCTGTCCGCGAGCAAAATTGCTGCAGTCTGCAGGAGTTAGCT
TGAAACGGAAATATATGGGGGTGATAAATATCGAGGGGAGGTGTGTTAAC
CACCTGCAACACAGTCTATGCACACATCAAACTCGCGCATGTACGTACCG
TAAGTTGCTCTGATGTCCCTCCCCCCCCTACCTTTTGGCCTCGAAGCACG
ACTTCTTGAATTACCTCCCAGAGGGAAAGTGGTTTTGGAGGCAAACATAA
AAATCCTCCTGGGGTAGCAACTTTTTGTGACACACCCCCGGGGGATGGGT
GGACTCCACTCACTACATTTCGTGGTAGCTTCCACACTGCCGTTTTGAAG
TATGAAACAAGGAGATCAATTATTTGGAACGGAATACGACGTCCGGTGTT
TGCTGACATTTAGTGTGCCTTGCGGGGTGTCCACAAGTAGAGCAACTTAC
AGTATGTTTGAGCGTGCTTTTCGCCTTCCCCCTCCGAGTAGATTTCCCCG
CGGGGTAGTGCTGGAAAAAAAGAAGACCCCTCCCTGGTTAGCTGCCTCGG
TATTTTGACTTCCCCCCAAGGGGTGTGCGTTCGAAAAAGTGCAATAGCCC
CCCCCTCCCCCCCGGGGGGAGGAAATCAAGGCATTTTTTGGTAGATAGAT
ACGCCATCAAACATCAAGCCCATGTTGAAATGACAGAGTAAAAACAACAT
AGCCCATGGAAATACGGGCCATCAACACCTTGTGTGACACGAAATTCCAC
ATCGCATGGAGGTTGAAAGCCGTCTGCGTTCCCCGCTTGCATATCCGCAA
TAACCTATCCATTTCTTACCATGGCACGCTTCGAGCGAGTGAAAATATCA
TGTTAACCATAAAACCGGACCCCACGAAGACTGCCGTTGTCTACCTACGT
TGATACAGTACTCACAAGGAATGTCATAATAGCATGCCCTGGGGTGGACA
CGTCAACCGAATACACTAGGACATGATTGGTACACACCGCGCGCACTATT
GTAAGGCACGAGCAAAAACAAAGAAGGAAAAAAGAAAAAGCCAGCAGACC
CGACCCCAGCTGGACTGATCTCGCAACTACCGATCGTCACGCGGGGTGAT
AGCAGGGGCCCGTTGGTTTTATGCTTAACCTCACGGGGGGGTGTGTTATC
TTCAGTGGTCTGGGTGATATTTTGGCCTCGGCTCTGTGTCTGGAAATATC
GTCACCGGGGGGGTGGTTTCTATTGTGGGGGTGGCATCGTGTGTAGTTTA
CGGTAGATCAATGCTAAGTGTAGGCGCTGAAAAGCTACACGCTACAACTA
TGATGCAACATCGTACAGAGGAAGCCTGGTGCGTTCATTTCGCGTTTTTT
TTTTTCAATGGCGTTTCCCCCGTGCGCAATATACTGCCCTGGTTTTGAAC
TACTCTGCTCTTGTCCGCCGTCGGCGCAGGCAGGTTTCGCTTTCGTGCAA
TTTTCTTTACTTCACAGAGAGATTTTGGTGGAGTGCCACTTTGATGGCAT
CATTATTTCACATGACCAGCATCCGTTTGCTCTCCGGCGGTGTTTGTTTT
ACATCTAAACCCGACCTCCCCTGTTTGCTTGTCGTCCGGACGTGGCTCTT
GTTTGCCCAATCCTTTCTCCAATCGAGGCAGGCCGGACAAGCGCAGCGAG
GACGAAGCGGAGGAAGGCCGTGGCGGGGCAAGCGGGAGGTCCCTGATATA
TCTCACGAACAGTAGCAGCAGCAGC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig9787:1503..3827- >mRNA_L-elsbetiae_contig9787.18743.1 ID=mRNA_L-elsbetiae_contig9787.18743.1|Name=mRNA_L-elsbetiae_contig9787.18743.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=558bp|location=Sequence derived from alignment at L-elsbetiae_contig9787:1503..3827- (Laminarionema elsbetiae ELsaHSoW15)
AGCGGCACAGCTAGCGGGAGCAGACAGACCAACAAACGAGCCCGCCGGAG
TGCTAGCGGTGGGGACTTGCATCCGGTCCGGGTAAAACGAAAAGGAGGTG
ACAACGAAGTGCCCGACGACGATAATTTGACGGCATGTCCGGAGCCAGGC
GACGCTGGGGTGAAGACGGAGGACATGGAATTGCCTTGCGAGATGGAGCC
GTGGAAAGCTGCAGAGCGGCACAGCTAGCGGGAGCAGACAGACCAACAAA
CGAGCCCGCCGGAGTGCTAGCGGTGGGGACTTGCATCCGGTCCGGGTAAA
ACGAAAAGGAGGTGACAACGAAGTGCCCGACGACGATAATTTGACGGCAT
GTCCGGAGCCAGGCGACGCTGGGGTGAAGACGGAGGACATGGAATTGCCT
TGCGAGATGGAGCCGTGGAAAGCTGCAGGCCGGACAAGCGCAGCGAGGAC
GAAGCGGAGGAAGGCCGTGGCGGGGCAAGCGGGAGGTCCCTGAGCCGGAC
AAGCGCAGCGAGGACGAAGCGGAGGAAGGCCGTGGCGGGGCAAGCGGGAG
GTCCCTGA back to top
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