mRNA_L-elsbetiae_contig9768.18725.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9768.18725.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 1.970e-19 Identity = 56/117 (47.86%), Postives = 66/117 (56.41%), Query Frame = 1 Query: 13 QSPLHLAARAGHHGVLLAA----GANVDVRDNNNRSPLDIAAKHGHPDHDNGDIIRVLLEAGSDIEAKVTGD-VSTPLHLAAYRRMRSSGTIRALLESGANVNTRDAYGATPLHDAC 348 +SPL +AA G V+ A VD D + L AA P DNGD +RVLL AG+D+ AK T D T L+LA RR+ S GTIRALLE GAN+N R TPLH AC Sbjct: 207 RSPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCDTSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVAC 323
BLAST of mRNA_L-elsbetiae_contig9768.18725.1 vs. uniprot
Match: A0A6H5K6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 2.900e-19 Identity = 44/69 (63.77%), Postives = 51/69 (73.91%), Query Frame = 1 Query: 148 DNGDIIRVLLEAGSDIEAKVTGD--VSTPLHLAAYRRMRSSGTIRALLESGANVNTRDAYGATPLHDAC 348 DNGD +RVLLEAG+D++AK TGD +TPLH A RR+ G IRALLE GANVN RD + TPLH AC Sbjct: 36 DNGDTVRVLLEAGADVDAKTTGDGNCATPLHYAVNRRIAPIGAIRALLEGGANVNARDVFDQTPLHVAC 104
BLAST of mRNA_L-elsbetiae_contig9768.18725.1 vs. uniprot
Match: A0A6H5JHD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHD6_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 3.860e-17 Identity = 51/108 (47.22%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 76 NVDVRDNNNRSPLDIAAKHGHPD--------------HDNGDIIRVLLEAGSDIEAKVTGDVS-TPLHLAAYRRMRSSGTIRALLESGANVN--TRDAYGATPLHDAC 348 N + NN RSPL++AA GH + DNGD +R LL AG+D+ + T ++ TPLHLAA R+ S GTIRALLE GAN+N T D TPLH+AC Sbjct: 156 NHRMLSNNTRSPLEVAANGGHGNVAALHCAAVFVVAVRDNGDAVRALLGAGADVNVEATNNICFTPLHLAACHRIASDGTIRALLEGGANINACTEDE---TPLHEAC 260
BLAST of mRNA_L-elsbetiae_contig9768.18725.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 78.6 bits (192), Expect = 1.250e-14 Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 1 Query: 148 DNGDIIRVLLEAGSDIEAKVTGDV--STPLHLAAYRRMRSSGTIRALLESGANVNTRDAYGATPLHDAC 348 D GD +RVLL AG+D+ AK T D PLH+A R+ S+GTIRALLE GA+VN RD TPLH+AC Sbjct: 293 DKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEAC 361
BLAST of mRNA_L-elsbetiae_contig9768.18725.1 vs. uniprot
Match: D7G6Z8_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Z8_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 3.100e-14 Identity = 52/113 (46.02%), Postives = 61/113 (53.98%), Query Frame = 1 Query: 19 PLHLAARAGHHGVL---LAAGANVDVRDNNNRSPLDIAAKHGHPDHDNGDIIRVLLEAGSDIEAKVT-GDVSTPLHLAAYRRMRSSGTIRALLESGANVNTRDAYGATPLHDA 345 P +AAR GH +L L G V D N + L AA G P DN IRVLLEAG ++ AK T + TPLHL R+ S G + ALLE GA+VN R TPLH A Sbjct: 117 PFDIAARRGHANILKAFLETGTEVVAADGNGWTALHGAAS-GIPSLDNRGTIRVLLEAGVNVNAKATCRSLYTPLHLTVDYRVASVGMVGALLEGGADVNARAERDQTPLHVA 228
BLAST of mRNA_L-elsbetiae_contig9768.18725.1 vs. uniprot
Match: A0A8H4K570_9HYPO (Ankyrin repeat-containing n=1 Tax=Fusarium acutatum TaxID=78861 RepID=A0A8H4K570_9HYPO) HSP 1 Score: 69.7 bits (169), Expect = 5.790e-12 Identity = 47/111 (42.34%), Postives = 59/111 (53.15%), Query Frame = 1 Query: 13 QSPLHLAARAGHHGV---LLAAGANVDVRDNNNRSPLDIAAKHGHPDHDNGDIIRVLLEAGSDIEAKVTGDVSTPLHLAAYRRMRSSGTIRALLESGANVNTRDAYGATPL 336 Q+PL AA GH GV L GA+V D N +PL AA +G N D IRVL++AGSD+E + TPLH A ++R S R LL+ GA V+ D T L Sbjct: 56 QTPLSFAAEIGHVGVVKILCMNGADVGAVDGGNHTPLSRAAING-----NEDAIRVLIDAGSDMETRSAYRKKTPLHWAVFKRRVES--TRLLLQRGAQVDAEDTLFGTAL 159
BLAST of mRNA_L-elsbetiae_contig9768.18725.1 vs. uniprot
Match: A0A2I0RU16_9PEZI (Putative ankyrin repeat protein n=1 Tax=Cercospora zeina TaxID=348901 RepID=A0A2I0RU16_9PEZI) HSP 1 Score: 70.9 bits (172), Expect = 6.520e-12 Identity = 44/119 (36.97%), Postives = 66/119 (55.46%), Query Frame = 1 Query: 1 DGQKQSPLHLAARAGHHG---VLLAAGANVDVRDNNNRSPLDIAAKHGHPDHDNGDIIRVLLEAGSDIEAKVTGDVSTPLHLAAYRRMRSSGTIRALLESGANVNTRDAYGATPLHDAC 348 DG +PL AA G +G +LL GA+V + +N N P+ +AA+ G N + +R+L+++G+DI + TPLH A + ++ LLE GA ++TRD G TPLH C Sbjct: 516 DGTGYTPLAWAAARGDNGSVEILLEYGASVAMTNNVNLQPIHLAAQTG-----NTETLRILIKSGADINIQTPDTKMTPLH-EAVETQDNPEHVQGLLELGAQIDTRDFCGWTPLHWCC 628
BLAST of mRNA_L-elsbetiae_contig9768.18725.1 vs. uniprot
Match: F2TZP9_SALR5 (Beta-N-acetylhexosaminidase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TZP9_SALR5) HSP 1 Score: 68.2 bits (165), Expect = 5.860e-11 Identity = 49/129 (37.98%), Postives = 70/129 (54.26%), Query Frame = 1 Query: 7 QKQSPLHLAARAGHHG---VLLAAGANVDVRDNNNRSPLDIAAKHGH-PD-----------HDNGDIIRVLLEAGSDIEAKVTGDV-STPLHLAAYRRMRSSGTIRALLESGANVNTRDAYGATPLHDA 345 + SPLH A R GH +L+AAGA++ D+ R+P+D+A K GH PD D+ + + LL AG ++ + +T LH AA + T+ +L GA+VN R+A GATPLHDA Sbjct: 58 ETMSPLHYAMRMGHADAARMLVAAGADLSAVDSEGRTPVDLA-KQGHVPDVLTSELFTAVARDDVERVTQLLSAGLTLDGVDNAEKGNTCLHWAAS--LSQPSTVELILAKGADVNARNACGATPLHDA 183
BLAST of mRNA_L-elsbetiae_contig9768.18725.1 vs. uniprot
Match: UPI001D050763 (uncharacterized protein n=1 Tax=Morchella sextelata TaxID=1174677 RepID=UPI001D050763) HSP 1 Score: 67.0 bits (162), Expect = 1.390e-10 Identity = 47/113 (41.59%), Postives = 62/113 (54.87%), Query Frame = 1 Query: 16 SPLHLAARAGHHG---VLLAAGANVDVRDNNNRSPLDIAAKHGHPDHDNGDIIRVLLEAGSDIEAKVT--GDVSTPLHLAAYRRMRSSGTIRALLESGANVNTRDAYGATPLH 339 SPLH +A G L+AAG +++V+D NR+PL AA H D +R LL+ G++I D T LHL A R S + LL+ GA+VN R+A GATPLH Sbjct: 54 SPLHWSAARGFRNNIAPLVAAGCDIEVKDWTNRTPLMAAALSNHLD-----TVRALLDNGANINENSGRFNDDGTALHLVA--RDGSVEMVTLLLDYGADVNVREARGATPLH 159
BLAST of mRNA_L-elsbetiae_contig9768.18725.1 vs. uniprot
Match: A0A6H5KVD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD2_9PHAE) HSP 1 Score: 63.2 bits (152), Expect = 3.180e-10 Identity = 39/99 (39.39%), Postives = 52/99 (52.53%), Query Frame = 1 Query: 55 VLLAAGANVDVRDNNN-RSPLDIAAKHGHPDHDNGDIIRVLLEAGSDIEAKVTGDVSTPLHLAAYRRMRSSGTIRALLESGANVNTRDAYGATPLHDAC 348 VLL GA+ + + NN ++ L AA+ D G+ +RVLLEAG+DIEAK STP+HL+A R +SG I + PLH AC Sbjct: 11 VLLGNGADANAKHVNNWKTALHHAAEPSRRGSDKGNAVRVLLEAGADIEAKTKDCSSTPVHLSACSRSSTSGAILXXXXXXXXXXAEEVDRCPPLHLAC 109 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9768.18725.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9768.18725.1 >prot_L-elsbetiae_contig9768.18725.1 ID=prot_L-elsbetiae_contig9768.18725.1|Name=mRNA_L-elsbetiae_contig9768.18725.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=116bp DGQKQSPLHLAARAGHHGVLLAAGANVDVRDNNNRSPLDIAAKHGHPDHDback to top mRNA from alignment at L-elsbetiae_contig9768:5743..6407- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9768.18725.1 ID=mRNA_L-elsbetiae_contig9768.18725.1|Name=mRNA_L-elsbetiae_contig9768.18725.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=665bp|location=Sequence derived from alignment at L-elsbetiae_contig9768:5743..6407- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9768:5743..6407- >mRNA_L-elsbetiae_contig9768.18725.1 ID=mRNA_L-elsbetiae_contig9768.18725.1|Name=mRNA_L-elsbetiae_contig9768.18725.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=696bp|location=Sequence derived from alignment at L-elsbetiae_contig9768:5743..6407- (Laminarionema elsbetiae ELsaHSoW15)back to top |