mRNA_L-elsbetiae_contig9756.18714.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9756.18714.1
Unique NamemRNA_L-elsbetiae_contig9756.18714.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig9756.18714.1 vs. uniprot
Match: D7G1Z4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Z4_ECTSI)

HSP 1 Score: 459 bits (1180), Expect = 4.940e-162
Identity = 223/245 (91.02%), Postives = 236/245 (96.33%), Query Frame = 1 
Query:    1 MPKKSSNPVVALTSGCIAGAVEAMCVWPLEYVKARLHTADKLPAGQKPKYTGVVSGLTYTVRTTGFFSLYRGLAPTLLGSMPKAGIRFGGNSELKKLLAGKDNKKLNSAEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKTEGPSGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARDLTDLENLFGGMSAGCFSTLGNNPFDVVKTRMQGMDAARYKNTADCFRQV 735
            M KKSSNPVV+LTSGCIAGAVEAMCVWPLEYVK +L  ADKLPAGQKPKYTGVVSGLTYTVRTTGFFSLYRGLAPTLLGSMPKAGIRFGGNSELKK+LAGK+NKKL+S EQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILK EGP+GLYQGVWATIAKQGSNQGLRFMWFNKYKGI+SDDGAR L+D+ENL GGMSAGCFSTLGNNPFDVVKTRMQG+DAA+YK+T DCFRQ+
Sbjct:    1 MSKKSSNPVVSLTSGCIAGAVEAMCVWPLEYVKTQLQLADKLPAGQKPKYTGVVSGLTYTVRTTGFFSLYRGLAPTLLGSMPKAGIRFGGNSELKKILAGKENKKLSSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIVSDDGARPLSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQI 245
[Close]
BLAST of mRNA_L-elsbetiae_contig9756.18714.1 vs. uniprot
Match: A0A835Z2W7_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2W7_9STRA)

HSP 1 Score: 335 bits (858), Expect = 4.100e-113
Identity = 167/245 (68.16%), Postives = 196/245 (80.00%), Query Frame = 1 
Query:    1 MPKKSSNPVVALTSGCIAGAVEAMCVWPLEYVKARLHTADKLPAGQKPKYTGVVSGLTYTVRTTGFFSLYRGLAPTLLGSMPKAGIRFGGNSELKKLLAGKDNKKLNSAEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKTEGPSGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARDLTDLENLFGGMSAGCFSTLGNNPFDVVKTRMQGMDAARYKNTADCFRQV 735
            M  K     VALTSG IAG +EA+ VWP+E++K +L   +KLP G+KPK+TGV SG+ YTVRTTGF SLYRGLAPTL+GSMPKAGIRFGGN+ LKK LA K N KL   +QF AGFGAGV+EA+ AVTPIET+KTKAIQ N PF+ GV+ ILKTEGP+GLYQG  AT+ KQGSNQGLRFMWFN+YK  +  +  R L+ LENL GGMSAG FSTLGNNPFDVVKTRMQG++A RY +T DCF ++
Sbjct:    1 MADKKVKTTVALTSGTIAGGLEAISVWPMEFMKTQLQLMEKLPPGEKPKFTGVFSGIAYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNNFLKKQLADK-NGKLTPTKQFAAGFGAGVVEALVAVTPIETIKTKAIQGNMPFVAGVKHILKTEGPAGLYQGAGATVLKQGSNQGLRFMWFNEYKKWLMGNTNRTLSPLENLLGGMSAGTFSTLGNNPFDVVKTRMQGLNANRYSSTLDCFAKI 244
[Close]
BLAST of mRNA_L-elsbetiae_contig9756.18714.1 vs. uniprot
Match: A0A7S2UMX2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UMX2_9STRA)

HSP 1 Score: 316 bits (810), Expect = 1.480e-105
Identity = 151/242 (62.40%), Postives = 187/242 (77.27%), Query Frame = 1 
Query:   10 KSSNPVVALTSGCIAGAVEAMCVWPLEYVKARLHTADKLPAGQKPKYTGVVSGLTYTVRTTGFFSLYRGLAPTLLGSMPKAGIRFGGNSELKKLLAGKDNKKLNSAEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKTEGPSGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARDLTDLENLFGGMSAGCFSTLGNNPFDVVKTRMQGMDAARYKNTADCFRQV 735
            K   P++ + +GCIAGAVEA  VWP+EY+K +L    K+  G K  YTG++SGL+YTVRTTGF SLYRGLAPTL+GS+PKAGIRFG N+ +K  L  KD  KL   + F+AG GAGV EA+  V P+ET+KTK I+ N PF QG+R I+KTEG SG+YQG + T  KQGSNQGLRFMWFN+YK I+++DG + +T +  L GGM+AGCFSTLGNNPFDV+KTRMQG  AA+YK+T DCFRQV
Sbjct:   18 KKRGPLLPMAAGCIAGAVEASSVWPMEYIKTQLQLQSKVK-GAKVPYTGMISGLSYTVRTTGFLSLYRGLAPTLIGSVPKAGIRFGLNAVIKDALRDKDTGKLTIGKNFVAGLGAGVTEALIIVAPVETIKTKCIEQNQPFAQGLRHIIKTEGISGIYQGAFPTALKQGSNQGLRFMWFNEYKRIVTNDGEKQMTPILGLLGGMTAGCFSTLGNNPFDVIKTRMQGSQAAQYKSTLDCFRQV 258
[Close]
BLAST of mRNA_L-elsbetiae_contig9756.18714.1 vs. uniprot
Match: A0A7S0AHJ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AHJ3_9STRA)

HSP 1 Score: 314 bits (804), Expect = 3.120e-105
Identity = 150/244 (61.48%), Postives = 189/244 (77.46%), Query Frame = 1 
Query:    4 PKKSSNPVVALTSGCIAGAVEAMCVWPLEYVKARLHTADKLPAGQKPKYTGVVSGLTYTVRTTGFFSLYRGLAPTLLGSMPKAGIRFGGNSELKKLLAGKDNKKLNSAEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKTEGPSGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARDLTDLENLFGGMSAGCFSTLGNNPFDVVKTRMQGMDAARYKNTADCFRQV 735
            P K  +P++ + +GC+AGA+EA  VWP+E++K +L    K    Q P Y+G+V GLTYTVRTTGFFSLYRGLAPTL+GS+PKAGIRFG N+ +K  L  KD K L   + F+AG GAGV EA+  V P+ET+KTK I+TN+PF++G++ I+KTEG  G+YQG  AT  KQGSNQGLRFMWFN+YK I+++ G +++T L  LFGGMSAGCFSTLGNNPFDVVKTRMQG  A+RY  T DCF+QV
Sbjct:    5 PPKKKSPLLPMAAGCVAGAIEATAVWPMEFIKTQLQLQSKAKGAQLP-YSGMVGGLTYTVRTTGFFSLYRGLAPTLIGSIPKAGIRFGLNAVIKDNLRDKDGK-LTMGKNFIAGLGAGVSEALIIVAPVETIKTKCIETNSPFVEGLKHIIKTEGIGGIYQGAAATAMKQGSNQGLRFMWFNEYKQIVTNHGEKEMTPLLGLFGGMSAGCFSTLGNNPFDVVKTRMQGTKASRYAGTLDCFKQV 246
[Close]
BLAST of mRNA_L-elsbetiae_contig9756.18714.1 vs. uniprot
Match: A0A1E7EPB3_9STRA (Mitochondrial carrier n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EPB3_9STRA)

HSP 1 Score: 315 bits (806), Expect = 3.620e-105
Identity = 152/243 (62.55%), Postives = 190/243 (78.19%), Query Frame = 1 
Query:    7 KKSSNPVVALTSGCIAGAVEAMCVWPLEYVKARLHTADKLPAGQKPKYTGVVSGLTYTVRTTGFFSLYRGLAPTLLGSMPKAGIRFGGNSELKKLLAGKDNKKLNSAEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKTEGPSGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARDLTDLENLFGGMSAGCFSTLGNNPFDVVKTRMQGMDAARYKNTADCFRQV 735
            KKS+NP+ A+ +GCIAG VEA  VWP+EY+K +L    K   G K  YTG++SGL YT+ TTGFFSLYRGLAPTL+GS+PKAGIRFG NS +K+ L  KD K L + + F+AG GAGV EA+  V P+ETVKTK I+ N PF++G++ I+KTEG  G+YQG +AT  KQGSNQGLRFMWFN+YK  ++++G   LT +  LFGGMSAGCFSTLGNNPFDVVKTRMQG +A++YK T DCF+Q+
Sbjct:    4 KKSNNPLTAMAAGCIAGGVEATSVWPMEYIKTQLQLKSK---GSKLPYTGMISGLKYTIETTGFFSLYRGLAPTLIGSIPKAGIRFGLNSVIKEKLRDKDGK-LGAGKNFVAGLGAGVSEALLIVAPVETVKTKVIEMNMPFLEGLKHIIKTEGFGGVYQGAFATALKQGSNQGLRFMWFNEYKNRVTNEGEIPLTPIMGLFGGMSAGCFSTLGNNPFDVVKTRMQGTNASQYKGTLDCFQQI 242
[Close]
BLAST of mRNA_L-elsbetiae_contig9756.18714.1 vs. uniprot
Match: A0A7S4N5N2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N5N2_9STRA)

HSP 1 Score: 311 bits (797), Expect = 8.720e-104
Identity = 150/242 (61.98%), Postives = 185/242 (76.45%), Query Frame = 1 
Query:   10 KSSNPVVALTSGCIAGAVEAMCVWPLEYVKARLHTADKLPAGQKPKYTGVVSGLTYTVRTTGFFSLYRGLAPTLLGSMPKAGIRFGGNSELKKLLAGKDNKKLNSAEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKTEGPSGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARDLTDLENLFGGMSAGCFSTLGNNPFDVVKTRMQGMDAARYKNTADCFRQV 735
            K  NP++ + +GC+AG +EA  VWP+E++K +L         Q P YTG+VSGLTYTVRTTGFFSLYRGLAPTL+GS+PKAGIRFG N  +K+ L  KD K L   + FLAG GAGV EA+  V P+ETVKTK I+TN PF++G+  I+KTEG  G+Y+G  AT  KQGSNQGLRFMWFNKYK I++ +G + +T L  LFGGMSAGCFSTLGNNPFDVVKTR+QG  A++Y NT DCF+Q+
Sbjct:    6 KKKNPLLPMAAGCVAGGIEATAVWPMEFIKTQLQLQSNAKGAQLP-YTGMVSGLTYTVRTTGFFSLYRGLAPTLIGSIPKAGIRFGLNGVIKENLRDKDGK-LTLGKNFLAGLGAGVSEALIIVAPVETVKTKCIETNMPFVKGITHIIKTEGIGGIYKGAVATAMKQGSNQGLRFMWFNKYKDIVTKEGDKPMTPLLGLFGGMSAGCFSTLGNNPFDVVKTRLQGTKASQYANTLDCFKQI 245
[Close]
BLAST of mRNA_L-elsbetiae_contig9756.18714.1 vs. uniprot
Match: A0A448Z823_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z823_9STRA)

HSP 1 Score: 311 bits (796), Expect = 1.240e-103
Identity = 153/242 (63.22%), Postives = 189/242 (78.10%), Query Frame = 1 
Query:   10 KSSNPVVALTSGCIAGAVEAMCVWPLEYVKARLHTADKLPAGQKPKYTGVVSGLTYTVRTTGFFSLYRGLAPTLLGSMPKAGIRFGGNSELKKLLAGKDNKKLNSAEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKTEGPSGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARDLTDLENLFGGMSAGCFSTLGNNPFDVVKTRMQGMDAARYKNTADCFRQV 735
            KSSNP+ A+++GCIAGAVEA  VWP+E++K +L    K  +G K  Y G++ GL+YTVRTTGFFSLYRGLAPTL+GS+PKAGIRFG NS +K+ L G+D K L  A+ F+AG GAGV EA+  V P+ETVKT+ I+ N PF+ G++ I+++EG  G+Y+G  AT  KQGSNQGLRFMWFN+YK  I++DG +  T L  LFGGMSAGCFST+GNNPFDVVKTRMQG  A RYKNT DCF QV
Sbjct:    5 KSSNPLTAMSAGCIAGAVEATAVWPMEFIKTQLQLGSK--SGSKLPYGGMIEGLSYTVRTTGFFSLYRGLAPTLVGSVPKAGIRFGLNSLIKEKLRGEDGK-LTPAKNFVAGLGAGVSEALLVVAPVETVKTRVIELNMPFLGGLKHIVRSEGIGGVYKGASATAMKQGSNQGLRFMWFNEYKKRITNDGEKPXTPLMGLFGGMSAGCFSTIGNNPFDVVKTRMQGTQATRYKNTMDCFVQV 243
[Close]
BLAST of mRNA_L-elsbetiae_contig9756.18714.1 vs. uniprot
Match: A0A1Z5JUL9_FISSO (Solute carrier family 25 (Mitochondrial citrate transporter), member 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JUL9_FISSO)

HSP 1 Score: 306 bits (783), Expect = 1.250e-101
Identity = 149/243 (61.32%), Postives = 181/243 (74.49%), Query Frame = 1 
Query:    7 KKSSNPVVALTSGCIAGAVEAMCVWPLEYVKARLHTADKLPAGQKPKYTGVVSGLTYTVRTTGFFSLYRGLAPTLLGSMPKAGIRFGGNSELKKLLAGKDNKKLNSAEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKTEGPSGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARDLTDLENLFGGMSAGCFSTLGNNPFDVVKTRMQGMDAARYKNTADCFRQV 735
            KK  NP  AL +GCIAG +EA  VWP+E++K +L    K+ AG KP YT ++ GL YTVR TGF SLYRGLAPTL+GS+PKAGIRFG NS +K+ L    N  L  A+ F+AG GAGV EA+  VTP+ET+KT+ I+ N PF  G++ IL+ EG  G+YQG  AT  KQGSNQGLRFMWFN+YK I+++DG   +T L  L GGMSAGCFSTLGNNPFDV+KTRMQG +A RYKNT DCF Q+
Sbjct:    5 KKKKNPFTALAAGCIAGGIEATAVWPMEFIKTQLQLQSKM-AGSKPPYTSMMGGLAYTVRETGFLSLYRGLAPTLIGSIPKAGIRFGLNSIIKEQLR-DTNGNLTPAKNFVAGLGAGVAEALIIVTPVETIKTRCIEKNQPFRAGMQEILRKEGWKGIYQGASATALKQGSNQGLRFMWFNEYKRIVTNDGTTPMTPLLGLLGGMSAGCFSTLGNNPFDVIKTRMQGTEARRYKNTLDCFLQI 245
[Close]
BLAST of mRNA_L-elsbetiae_contig9756.18714.1 vs. uniprot
Match: A0A7S2XWM9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWM9_9STRA)

HSP 1 Score: 303 bits (777), Expect = 9.500e-101
Identity = 145/248 (58.47%), Postives = 185/248 (74.60%), Query Frame = 1 
Query:    1 MPKKSSNPVVALTSGCIAGAVEAMCVWPLEYVKARLHTADKLPAGQKPKYTGVVSGLTYTVRTTGFFSLYRGLAPTLLGSMPKAGIRFGGNSELKKLLAGKDNKKLNSAEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKTEGPSGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARD---LTDLENLFGGMSAGCFSTLGNNPFDVVKTRMQGMDAARYKNTADCFRQV 735
            M KKSS+P VA+ +G IAG +E +CVWP+E++K +L   +K   GQKPK+TG++ G  Y + + GF  LYRGLAPTL+GS+PKAGIRFG N++ KK+LAG D K +++  QF AG  AG +EA  A TPIETVKTK IQTN+ F+ G+R ++ TEG  GLYQG+ AT+ KQG NQGLRFMWFN+YKG +   G  D   L  +++L GGMSAG FSTLG NPFDVVKTRMQG+DA +YK T DCF+ +
Sbjct:    1 MAKKSSDPKVAILAGSIAGGIETVCVWPMEFIKTQLQLQEKAATGQKPKFTGMIGGFRYVISSQGFLGLYRGLAPTLVGSLPKAGIRFGANAQFKKMLAGPDGK-VSTKSQFFAGLMAGAIEATLATTPIETVKTKLIQTNSGFVSGIRQVMATEGIGGLYQGLQATVLKQGFNQGLRFMWFNEYKGALERWGYTDGSGLAPIQSLLGGMSAGVFSTLGTNPFDVVKTRMQGVDAKKYKGTLDCFKTI 247
[Close]
BLAST of mRNA_L-elsbetiae_contig9756.18714.1 vs. uniprot
Match: A0A7S1BL70_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BL70_9STRA)

HSP 1 Score: 296 bits (757), Expect = 8.740e-98
Identity = 149/244 (61.07%), Postives = 184/244 (75.41%), Query Frame = 1 
Query:    4 PKKSSNPVVALTSGCIAGAVEAMCVWPLEYVKARLHTADKLPAGQKPKYTGVVSGLTYTVRTTGFFSLYRGLAPTLLGSMPKAGIRFGGNSELKKLLAGKDNKKLNSAEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKTEGPSGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARDLTDLENLFGGMSAGCFSTLGNNPFDVVKTRMQGMDAARYKNTADCFRQV 735
            PKK S P +AL +GCIAG +EA  VWP+E++K +L  A   P G  P Y G+VSGL +TV++TGF SLYRGL PTL+GSMPKAGIRFG N+E K  L   D K L   + F+AG GAG+ EA   V P+ETVKTK +  +  F+  ++ ILK EGP+GLYQG +AT  KQGSNQGLRFMWFN+YK ++++DG + +T L  LFGGMSAGCFSTLGNNPFDVVKTRMQG+ A+ YKNTADCF+Q+
Sbjct:    5 PKKKS-PFIALGAGCIAGGMEACAVWPMEFIKTQLQLA---PKGSLP-YDGMVSGLRHTVQSTGFLSLYRGLLPTLIGSMPKAGIRFGLNTEFKGRLKDADGK-LTPGKNFIAGMGAGIGEAFMIVAPVETVKTKCVDLDKSFVDTMKYILKEEGPAGLYQGAFATALKQGSNQGLRFMWFNEYKQMVTNDGEKPMTPLLGLFGGMSAGCFSTLGNNPFDVVKTRMQGVRASEYKNTADCFKQI 242
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9756.18714.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1Z4_ECTSI4.940e-16291.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z2W7_9STRA4.100e-11368.16Mitochondrial carrier domain-containing protein n=... [more]
A0A7S2UMX2_9STRA1.480e-10562.40Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S0AHJ3_9STRA3.120e-10561.48Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A1E7EPB3_9STRA3.620e-10562.55Mitochondrial carrier n=1 Tax=Fragilariopsis cylin... [more]
A0A7S4N5N2_9STRA8.720e-10461.98Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A448Z823_9STRA1.240e-10363.22Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1Z5JUL9_FISSO1.250e-10161.32Solute carrier family 25 (Mitochondrial citrate tr... [more]
A0A7S2XWM9_9STRA9.500e-10158.47Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1BL70_9STRA8.740e-9861.07Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9756contigL-elsbetiae_contig9756:1330..7318 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score458.8
Seed ortholog evalue1.6e-126
Seed eggNOG ortholog2880.D7G1Z4
KEGG koko:K15100
KEGG TC2.A.29.7
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.mitochondrial tricarboxylic acid transmembrane transport
EggNOG OGsKOG0756@1,KOG0756@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-07_003590.1
Exons5
Model size735
Cds size735
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9756.18714.1prot_L-elsbetiae_contig9756.18714.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9756 1330..7318 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817038.096259-CDS-L-elsbetiae_contig9756:1329..14321622817038.096259-CDS-L-elsbetiae_contig9756:1329..1432Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9756 1330..1432 +
1691684000.5854166-CDS-L-elsbetiae_contig9756:1329..14321691684000.5854166-CDS-L-elsbetiae_contig9756:1329..1432Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9756 1330..1432 +
1622817038.109289-CDS-L-elsbetiae_contig9756:1560..15741622817038.109289-CDS-L-elsbetiae_contig9756:1560..1574Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9756 1561..1574 +
1691684000.6023872-CDS-L-elsbetiae_contig9756:1560..15741691684000.6023872-CDS-L-elsbetiae_contig9756:1560..1574Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9756 1561..1574 +
1622817038.1218328-CDS-L-elsbetiae_contig9756:4598..47691622817038.1218328-CDS-L-elsbetiae_contig9756:4598..4769Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9756 4599..4769 +
1691684000.612863-CDS-L-elsbetiae_contig9756:4598..47691691684000.612863-CDS-L-elsbetiae_contig9756:4598..4769Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9756 4599..4769 +
1622817038.1367-CDS-L-elsbetiae_contig9756:5888..61251622817038.1367-CDS-L-elsbetiae_contig9756:5888..6125Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9756 5889..6125 +
1691684000.6235218-CDS-L-elsbetiae_contig9756:5888..61251691684000.6235218-CDS-L-elsbetiae_contig9756:5888..6125Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9756 5889..6125 +
1622817038.1483884-CDS-L-elsbetiae_contig9756:7108..73181622817038.1483884-CDS-L-elsbetiae_contig9756:7108..7318Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9756 7109..7318 +
1691684000.6444893-CDS-L-elsbetiae_contig9756:7108..73181691684000.6444893-CDS-L-elsbetiae_contig9756:7108..7318Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9756 7109..7318 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9756.18714.1

>prot_L-elsbetiae_contig9756.18714.1 ID=prot_L-elsbetiae_contig9756.18714.1|Name=mRNA_L-elsbetiae_contig9756.18714.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=245bp
MPKKSSNPVVALTSGCIAGAVEAMCVWPLEYVKARLHTADKLPAGQKPKY
TGVVSGLTYTVRTTGFFSLYRGLAPTLLGSMPKAGIRFGGNSELKKLLAG
KDNKKLNSAEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRT
ILKTEGPSGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARDLTDL
ENLFGGMSAGCFSTLGNNPFDVVKTRMQGMDAARYKNTADCFRQV
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mRNA from alignment at L-elsbetiae_contig9756:1330..7318+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9756.18714.1 ID=mRNA_L-elsbetiae_contig9756.18714.1|Name=mRNA_L-elsbetiae_contig9756.18714.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5989bp|location=Sequence derived from alignment at L-elsbetiae_contig9756:1330..7318+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCGAAGAAAAGCTCGAACCCGGTGGTGGCGTTGACTTCGGGATGCAT
TGCCGGAGCCGTTGAGGCGATGTGCGTGTGGCCGCTTGAGTACGTGAAGG
CAAGTACACTGGGGAATGGATGCTGCACGGACGACGTGGTCTGTTCCGTA
TGGCCGCATAAATATGTACAGCAGCAGCAGCAGCAGCAGCAGCACACAGC
GAACACACTCCCGTGCAACATCATTATACAGGACTACACACTGCTGTTTT
GTAGTGCGACAAAACGATGTTTTTTTTGGCTCCGAGGGAATGGTGTTGCT
GCACACGAACCCTTGGTATGGATTATCTGTGTGGGGATGCTTATTTAACT
CGGAGTGTGTATACCTACGATCTTCAGCTGAAGCAGAGGTACACAGACAG
GTGTATCTACTGCTGGCAACCAGGCACTCAAGGCGGCCAGGCACTCTTTT
CTTTCCCGTGAGGAACGGGGCCGCGCGCAAAGTGCAATTTTGCGTTATGC
CATCAGCAACGTGATTTTTGCGAAAATGCATTGTAATTTACCATCCATGT
TTTTTTTGTTACATTTCCCCTCCTCAATCACAACACAACCCCCCAATACC
TATATATATGTGAGTGTTATTTCGTTATTTCGTTTTTCTTCGCTCCTTTT
CGGCGAGTTTTATCGCTGCTGAGGGCCGAGTTGGCGGCCAGGAGTGCTAG
TGTAGCAAAAATAATGAAAGCTAATCGTGCTCCAGTTACGGGGATGGGAT
GGTTTACACCGATCACAAGTTCGGCAGGGGATTCGCGGTAAAAAATCACG
CAACGTAGGTACAACACCACCTAACCCCCCGCTCTCTCTCGAGGCGCGCT
GGACCGCGCGACAGCAGTAGTTCCTATTTAGGAGCTCGCATACTCCATAC
CGGACGAAGCAAACCGCAGGATATATTGCTCATTGCTTGAGTCGGTGCCG
ATTTTAGACTCCGAATTGCTGTGCATATGTCGAACCAGAGCTGCCTTCCG
ATGCACTTCGGTGCGCTCGGCCAGGCCAGCAGCAGCGGAGGCAGTAGCAA
GGGTTAATGCTGTACCCACCCAGCCTCTCGTGGCATGAAGGGGTGCTCTG
CGCACCTGAGACCCTGAGCTTGCCGACCTGCGTAGTTTCGTGAGGGATTG
AAAAGCTCTGTTCGCAAGAAATCGTGCTGCGGTCTGTGTCCAACTGGCTC
CATCTATCTCGTCTCTCTTCCCTGCCCAACGTGTGCGACGACAAGGCCAA
ATATCTTCCCGTTTTGTGGCCACCTCTATAAAGTCACACATCTCTACTAC
ACAGCCTCAAAGTCGTTTTACGGACTCGTTTTTGGAAGCTGGGATATCTG
CTACTCCGTGTCGGGGCATACTGAGGCCCTGTGCTCGTGGCAGCAGGAAA
ATTCGTCTCCTTAAAACTAACTCTCGCACGTACATGCCTCCAAAAAATCG
GGAGTCAAACAACACTAGGTTAAGTTCCCGCGTTGGAAATTGAAAAGCAT
GGGCCTAGAAATACACATATACATAAATATTCAGCAGTATTGGTGCAAAC
ACGGCGTTATACTACGTCTTTCACAGCACGTAACTGCGCCTTTTATTGGT
CGGCTGCTGTATAACAGACCACTTTATCGTTCAAGAAACCGATTATCATG
CTGGTGGCGCCTCACTCTTGTAATTTTGTACATAGGCCTCTCTCTCTCGT
TATTTTTGAGACGGTTGCTCCCATCGCGCGAAACTCGCCGCATGTTTATG
ATAGACCCCACGGATATACGTAAAGCCGGAGTTTTTTAATTCATGACCTT
GATCACACACATCCCTTTCCATCCCTCTTAGTGCGAAATAAGTATCGTTT
GCAAGGCTGCTGTCCACAGAAGTCAATGATACGATTAGGCCGCTAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAAAGAGAGTCACGCCTCA
ATAGACTTCCCCAACGGATCCCCGCCTGTTGCTTGAAGGCGTTGCATGCA
ATTGCGGCAACATACATATATACAGGCAGCACCTTACGCGTTTGACGTCT
GACCTTTGCTGTATCGTACGGCCTACATAGGTAACTGCAAGGGGAATTAT
CCTACTACTGCCTGTGTATTTACCGCAAAGCACACAAACATCGGCGCGGT
GCGTCCGTTCGCTGAGCCAGTTTTCGGTTTCATCGGACATGAACAGACGC
TGTGACTTACTCTGCTGAAAGTTTTTTCCACTCGAGGAGGAAAGCAAAGG
CTGGCCCCCGTGGCACCTGCTGTTACCTAGCGTGCTTGCTCCCTCTTGAC
CCCTACTACTGCTGTGTTGATCAAAGGGTCCACTTTTGCACAACAGTCGT
GTTTCGTGTCAGCCTTACACGTAAATGCTGCGGGTGACCGGATCTATGTA
GATACCGCATGCAAACAAGTCCTTTCTCCGCCCCCTCCCCCCCCCCCCGC
CGCCGCTTTCCGCCTCCCTCGTCCGTCCGCCCCCGACGCCCATCCGCACG
TACGGCGCTATGTTTGAACGATTCTCCTTGGCACCTCGCGAACGACGCTT
GGGCTTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCACCGCTTCTTCTC
ATCGTACTTCCCTTCCTTCCTCAACAGACTCAGCTCCAGCTCGCGGTGAG
TCCGCGATGTGCGTGTACCGTACGTCGCTAGTGCAAGAATGCGCGCGTGT
GTAAGCTCTTTTACGTACTTGTTTCTTGAAGGCCAGCCAGCCACTGCCGT
TACGACAGACGGGCCGACAGCAGGAGCGCGTTCGGAGCAGGAAGCCGTGG
GAAAAGTGGGTGTTTTGGTGTTGTGTCATATCACGCCCGTCACCACAAAC
AAAAACACGTGGACAGTTCGGTAGCTTGTTTTCAGTTTTTTTCTGTTGTC
TGCTCTGTTTTTCGAGGCCCTCCCTCCCCGTCTCCGCGGTGACTGATCAT
GGACCACATTGCGTCGGTCACCGAAGCTGTTGGTGCCCGCGAAGCGACCG
GAACGTGTAGGGGGTTTGAATCATAATATAACAACCGACACCCCCCCCCC
CGCGCACCCGGGGGGCGACGCGCACCCATCGTCCTCGAATCGGCCACGAA
GAGAGGCAGCATCCATCGGCTGTCGCCACAGCAGCTACTTACCACACACG
GAGTTTGATAGACTCGCCTGCCTGCCTGCTTGCCTGCCTGCCTGTTTTCG
GCTGCCCGTTGACACCTTACGGCACCCCCCCTACACGCGTGCATGGCTCT
CCTTCCTTTCCCTTGGCAGGACAAGCTTCCGGCGGGACAGAAGCCCAAGT
ACACCGGGGTGGTGAGCGGGCTGACGTACACGGTGCGGACAACCGGGTTC
TTCTCGCTCTACCGAGGCCTCGCGCCGACCCTCTTGGGCTCCATGCCCAA
GGCAGGCATCCGATTCGGGGGGAACTCGGAGCTCAAGAAGGTAAAACAAA
AAAATGGTCTTGGCGGTTCGGGTCGGCGAGGGGTTGGGGCAGGCTGTTTT
TGTCCTGTGTGTGTGTGTGTGGGTGTATTATTTGTGTCTGGTAGGCCGGG
GCCAACCGTTCCGTTGCCCCCCCCCCCCCCCCCCCCGCCGCCGCTAAGGT
GGGTTGTTTTGTTTGTTTCTTCCTCTTATTTTATAAAGTTAATTATACAA
AAAAAAANNNNNNNNNNGGGGGGTTGGGGCGGGCTGTTTTTGTCCTGTGT
GTGTGGGGGGGGGTGTTTTTTTTGTGTCTGGTGGGCCGGGGCCAACCGTT
CCGTTGCCCCCCCCCCCCCCCGGGTGTTGAGATTAAGTGTGTCTGCATGC
TACGTACGTACCGTGTTACTACGGATAATCAGATACCGAGGAAGTCGGAT
ACGGAAGAAAGCACAGCCGTTCTGCTCGTAATTTCGAGGACTTGGTGTCC
CTGTGAAACAACGTTCGCCTGTATCGCGGCCGTGTTTCCTCCTTCTGAAA
ACAACACCAGACTGCCGGTTCCGAGTTCCCCACGCCTATCAGGCCGAGAT
AACGCGGTCGTTCCCAGTAGAGTGCAGTCCCGGCCCCCGCTGATGAGAAA
CCAGAGATCAGTCCCAGCCTGACTTTCTTATACGAGGCCAGCTATCATCA
CTGCTGTCTGTCTACTAAAGTAGAGTAGGGTTCAGTGTCGCACTTGCCTC
AGGGTCGCGACACTTTCTTCAACGGGGCCTTCTTATGAGCGGGTCGGTAC
TATGTATACTACAGTGTCGTCCTCGTGCACCACACACACAAACGAGTCAA
AATCACCGTCAACATACATATTACGCTGTCGAAGCCAACCTGCAGGTCTT
CCCTTTCACCCGTGGCCGGATGACTGACCGCCTGAATATGCTCCCCGCCT
GCCTGCCTGCCTGCTTCCCTGCCTGCCTGCCTCTCGCCCCGTGTTTGCGT
GCGTGCCGTGGCCCGCCAATGGGTGCCATGCCATGCCGCTCCGTCCTCCC
GATTGGGCGACCCGACCCACCCCGACCTGACACAACACGACATAACATGA
CCCGGACGAACGAACGAACGATCGAACAGTCGAACGATCGAATGGTCGAA
CGAGAGCAGCTGCTGGCGGGCAAGGACAACAAGAAGCTCAACTCCGCGGA
GCAGTTCCTGGCGGGCTTCGGCGCGGGGGTGCTGGAGGCGATCTTCGCCG
TGACGCCCATCGAGACGGTCAAGACCAAGGCCATCCAGACCAACGCCCCG
TTCATGCAGGGGGTCAGGACTATCTTGAAGACCGAGGGGCCCTCTGGCCT
GTACCAGGGTGTGTGGGCCACCATCGCGAAGCAGGGCTCCAACCAGGTGT
GTGTGCGTGTGTGAGTGTATGTTGTGCGTTTTTTCGTTTTTTCAATGAAA
ATCCGGTATGTGAAAAATTGAACCTATTCCTATTGGATACGTTTTTTTGT
TTGTGTTGTGTGGGTGTTGGCGTGCGTAGAGCTTGCTACTTACTCCGTCG
CCAACAAACCACGCGTCGGTTTTGAGTAGGTTAAAACACCGAAGGCTTTC
GTCAGGCCTGGGTCCCCCGAGGGGGGATCCGCCGTGCACCACAGCTGTGT
TCATCTTTCGGTACATAAGATACATAGATACGTACTTCTATTTGCCAAGA
TCACGCCGGTGATCAGCCGACTGGCTGACCGTTGAAATACTTCGGTGTGC
GCGGAATGAAAACCTCCAGTGCGGGTGTTGAAATAGTTGTGGTTGTGGTT
TTGCTCTTTCTTGTCGACTTCTGTCAGAGCTGTGCCTGCAACTGGTGTGT
GTTTTGTGTCTTGCGTTTTATCTGTGCTGAAAAACGTCGTCGCCCGTCTC
CGCGGGGTGATATTGTTGGCGTTACAGGAGGTGCGGGGTGGTTGGCGTAG
TGGAGCGTGCAGTGTATTTTTTTGTAGGTGTTTTCTTTTTTGAGACAATT
CTTGTGTTTTCGTGCCACCGGTGATAACTGCGACACAAAGCTACCGCTCG
ACACATTCCGTGCAGTCGTTTCCTAGGGAGGGCCAGCGGGTGGTTGCTCT
CGAGCGATGAAGCGCTCAGAGTCCTGCCTAGACCCTCTGCAGCGTTAGGC
CAAAACAATAGCCCACGGCTCCTTCTGCTGGCTTGACTTGTTGGCCAAAA
GGATAATAGAATATGTAGCACGCACGCACTGAGTTTGGGCTTCAAAACCG
CGGTTTAGATCTGCTACCGCCGCCCGCATGTTTTTTCTCTCGTTTCCATG
GTGGTAAATCTCATCTCGACGCGGAAAATCCCATGGCGTGTTCTGGTTCT
GGTTCTGGTCCTGGCTCTGGTCCTGGCAGGGGTTGCGGTTCATGTGGTTC
AACAAGTACAAGGGGATCATCAGCGACGACGGGGCCCGGGATTTGACGGA
CCTCGAGAACCTTTTCGGCGGCATGTCCGCCGGCTGCTTCAGCACGCTGG
GTAACAATCCGTTCGACGTCGTGAAGACTAGAATGCAGGGGATGGACGCG
GCTAGGTACAAGAACACGGCCGACTGCTTCCGACAGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9756:1330..7318+

>mRNA_L-elsbetiae_contig9756.18714.1 ID=mRNA_L-elsbetiae_contig9756.18714.1|Name=mRNA_L-elsbetiae_contig9756.18714.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1470bp|location=Sequence derived from alignment at L-elsbetiae_contig9756:1330..7318+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCGAAGAAAAGCTCGAACCCGGTGGTGGCGTTGACTTCGGGATGCAT
TGCCGGAGCCGTTGAGGCGATGTGCGTGTGGCCGCTTGAGTACGTGAAGG
CAAATGCCGAAGAAAAGCTCGAACCCGGTGGTGGCGTTGACTTCGGGATG
CATTGCCGGAGCCGTTGAGGCGATGTGCGTGTGGCCGCTTGAGTACGTGA
AGGCAAGACTACACACTGCTGACTACACACTGCTGACAAGCTTCCGGCGG
GACAGAAGCCCAAGTACACCGGGGTGGTGAGCGGGCTGACGTACACGGTG
CGGACAACCGGGTTCTTCTCGCTCTACCGAGGCCTCGCGCCGACCCTCTT
GGGCTCCATGCCCAAGGCAGGCATCCGATTCGGGGGGAACTCGGAGCTCA
AGAAGGACAAGCTTCCGGCGGGACAGAAGCCCAAGTACACCGGGGTGGTG
AGCGGGCTGACGTACACGGTGCGGACAACCGGGTTCTTCTCGCTCTACCG
AGGCCTCGCGCCGACCCTCTTGGGCTCCATGCCCAAGGCAGGCATCCGAT
TCGGGGGGAACTCGGAGCTCAAGAAGCTGCTGGCGGGCAAGGACAACAAG
AAGCTCAACTCCGCGGAGCAGTTCCTGGCGGGCTTCGGCGCGGGGGTGCT
GGAGGCGATCTTCGCCGTGACGCCCATCGAGACGGTCAAGACCAAGGCCA
TCCAGACCAACGCCCCGTTCATGCAGGGGGTCAGGACTATCTTGAAGACC
GAGGGGCCCTCTGGCCTGTACCAGGGTGTGTGGGCCACCATCGCGAAGCA
GGGCTCCAACCAGCTGCTGGCGGGCAAGGACAACAAGAAGCTCAACTCCG
CGGAGCAGTTCCTGGCGGGCTTCGGCGCGGGGGTGCTGGAGGCGATCTTC
GCCGTGACGCCCATCGAGACGGTCAAGACCAAGGCCATCCAGACCAACGC
CCCGTTCATGCAGGGGGTCAGGACTATCTTGAAGACCGAGGGGCCCTCTG
GCCTGTACCAGGGTGTGTGGGCCACCATCGCGAAGCAGGGCTCCAACCAG
GGGTTGCGGTTCATGTGGTTCAACAAGTACAAGGGGATCATCAGCGACGA
CGGGGCCCGGGATTTGACGGACCTCGAGAACCTTTTCGGCGGCATGTCCG
CCGGCTGCTTCAGCACGCTGGGTAACAATCCGTTCGACGTCGTGAAGACT
AGAATGCAGGGGATGGACGCGGCTAGGTACAAGAACACGGCCGACTGCTT
CCGACAGGTGGGGTTGCGGTTCATGTGGTTCAACAAGTACAAGGGGATCA
TCAGCGACGACGGGGCCCGGGATTTGACGGACCTCGAGAACCTTTTCGGC
GGCATGTCCGCCGGCTGCTTCAGCACGCTGGGTAACAATCCGTTCGACGT
CGTGAAGACTAGAATGCAGGGGATGGACGCGGCTAGGTACAAGAACACGG
CCGACTGCTTCCGACAGGTG
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