mRNA_L-elsbetiae_contig9730.18703.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9730.18703.1
Unique NamemRNA_L-elsbetiae_contig9730.18703.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig9730.18703.1 vs. uniprot
Match: D7FS86_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS86_ECTSI)

HSP 1 Score: 349 bits (895), Expect = 1.800e-114
Identity = 201/252 (79.76%), Postives = 220/252 (87.30%), Query Frame = 1 
Query:    1 QVLEIPETADQSEVKRAYRRKALKTHPDVNAAPTAKADFGEVLNAYEVLSDERKRANYNRKRKFTNPFNRGRAGAXXXXXXXXXXXASWGSS-TYNAAKEEAARRWREQNPTPDDIDDSFGDIFRDLFGGIASXXXXXXVLNDVVDFLEDRVDGFSSDTSVEFEDLMASRNLQEMKEELENTRLLLEQLRIKSRKLSVDKITSEKEVAATKAGG-SKRFTDIDELDRQMAAVEKAAGIKARYEELQGHVKAS 750
            QVLEIPETADQSE+KRAYRRKALKTHPDVN APTAK D  EV+NAYEVLSDE+KRA+YN +RKF NPF RG    XXXXXXXXXXX       TYNAA+EEAARRWREQNPTPD+I DSFGDIFRDL GGIAS      VLNDVVDFLE++VDGFSSDTS+EFEDLMASRNLQEMKEELENTR LLEQL++KSRKL +DK+ +EKEV A KAGG S+RFTDIDELDRQM+A+EKAAGIKARY+ELQGHVKAS
Sbjct:   67 QVLEIPETADQSEIKRAYRRKALKTHPDVNTAPTAKEDLAEVVNAYEVLSDEKKRASYNTRRKFANPFRRGXXXXXXXXXXXXXXXXXXXXXXTYNAAREEAARRWREQNPTPDEIGDSFGDIFRDLVGGIASVGGGGGVLNDVVDFLENQVDGFSSDTSLEFEDLMASRNLQEMKEELENTRFLLEQLKMKSRKLGIDKLAAEKEVVAMKAGGGSRRFTDIDELDRQMSAIEKAAGIKARYDELQGHVKAS 318
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BLAST of mRNA_L-elsbetiae_contig9730.18703.1 vs. uniprot
Match: A0A6H5K7F7_9PHAE (HSP40 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7F7_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 5.430e-43
Identity = 96/115 (83.48%), Postives = 102/115 (88.70%), Query Frame = 1 
Query:    4 VLEIPETADQSEVKRAYRRKALKTHPDVNAAPTAKADFGEVLNAYEVLSDERKRANYNRKRKFTNPFNRGRAGAXXXXXXXXXXXASWG-SSTYNAAKEEAARRWREQNPTPDDI 345
            VLEIPETADQSE+KRAYRRKALKTHPDVNAAPTAK DF EV+NAYEVLSDE+KRA+YN KRKFTNPF RG    XXXXXXXXXXX     SSTYNAA+EEAARRWREQNPTPD+I
Sbjct:   50 VLEIPETADQSEIKRAYRRKALKTHPDVNAAPTAKEDFAEVVNAYEVLSDEKKRASYNTKRKFTNPFRRGXXXXXXXXXXXXXXXXXXXXSSTYNAAREEAARRWREQNPTPDEI 164
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BLAST of mRNA_L-elsbetiae_contig9730.18703.1 vs. uniprot
Match: A0A835YPK0_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPK0_9STRA)

HSP 1 Score: 143 bits (360), Expect = 2.300e-35
Identity = 109/245 (44.49%), Postives = 151/245 (61.63%), Query Frame = 1 
Query:    4 VLEIPETADQSEVKRAYRRKALKTHPDVNAAPTAKADFGEVLNAYEVLSDERKRANYNRKRKFTNPFNRGRAGAXXXXXXXXXXXASWGSSTYNAAKE----EAARRWREQNPTPDDIDDSFGDIFRDLFGGIASXXXXXX-VLNDVVDFLEDRVDGFSSDTSVEFEDLMASRNLQEMKEELENTRLLLEQLRIKSRKLSVDKITSEKEVAATKAGGSKRFTDIDELDRQMAAVEKAAGIKARYE 723
            VL I + A + ++KRAYR+ ALK+HPDV+ AP A+  F  ++ AYEVL +++KRA+Y+RKR+  +    GR+  XXXXXXXXXXX                 E  RRWREQNPT DDIDDSF  IF D+   + +       ++ D V+FLE +VDGFS+    E +DL+A    +E++ E +N RLL  Q  IK + +SV +     E AA   G +   T+ DELDRQM  V++AAG++ARY+
Sbjct:   11 VLGISDAATKDQIKRAYRKAALKSHPDVSDAPDARVKFMRIVEAYEVLYNDKKRADYDRKRRMGSG---GRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERERRWREQNPTRDDIDDSFTKIFGDVLKKVVTTAAGGRGIVEDFVEFLESQVDGFSAG-GAELDDLIARGTTEELRAEADNARLLARQ--IKKKLVSVGEECLAAERAAAAGGAASALTE-DELDRQMERVDRAAGLRARYD 248
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BLAST of mRNA_L-elsbetiae_contig9730.18703.1 vs. uniprot
Match: A0A4D9DC11_9STRA (J domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DC11_9STRA)

HSP 1 Score: 139 bits (349), Expect = 1.260e-33
Identity = 91/258 (35.27%), Postives = 142/258 (55.04%), Query Frame = 1 
Query:    7 LEIPETADQSEVKRAYRRKALKTHPDVNAAPTAKADFGEVLNAYEVLSDERKRANYNRKRKFTNPFNRGRAGAXXXXXXXXXXXASWGSSTYNAAKEEAARRWREQ------------NPTPDDIDDSFGDIFRDLFGGIASXXXXXXVLNDVVDFLEDRVDGFSSDTSVEFEDLMASRNLQEMKEELENTRLLLEQLRIKSRKLSVDKITSEKEVAATKAGGSKRFTDIDELDRQMAAVEKAAGIKARYEELQGHVK 744
            L+I ++A  +++KRAYRR AL+THPDVN AP A   F +V  AY+VLSD   R  Y+          RG  G+              G  T +++   ++R W +Q              T + IDDSF  IFRD  G + S       L DVV FLE  VDGFS ++  EFE+++   +LQ +++E+EN   L+ +LR K ++  +D + ++ ++   +A  ++   D++ +DRQ+ AVEK A  +AR ++L+GH+K
Sbjct:   15 LDIDKSASLNDIKRAYRRLALQTHPDVNKAPDAAETFKQVCEAYKVLSDAEARKGYD--------LARGIQGSGFGSGGRRWTNVG-GRGTASSSXXXSSRGWYDQYGPFGGRAPGANEDTAESIDDSFSSIFRDFVGNVGSNGGRGF-LEDVVSFLESNVDGFSEESDAEFEEILKGEDLQLVQDEIENLNFLIPKLREKQQQAKIDVMVAQGKLRTLQAAAAR---DLEGVDRQLEAVEKVAATQARVKDLEGHMK 259
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BLAST of mRNA_L-elsbetiae_contig9730.18703.1 vs. uniprot
Match: W7TRF1_9STRA (Chaperone protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRF1_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.670e-31
Identity = 91/258 (35.27%), Postives = 141/258 (54.65%), Query Frame = 1 
Query:    7 LEIPETADQSEVKRAYRRKALKTHPDVNAAPTAKADFGEVLNAYEVLSDERKRANYNRKRKFTNPFNRGRAGAXXXXXXXXXXXASWGSSTYNAAKEEAARRWREQ------------NPTPDDIDDSFGDIFRDLFGGIASXXXXXXVLNDVVDFLEDRVDGFSSDTSVEFEDLMASRNLQEMKEELENTRLLLEQLRIKSRKLSVDKITSEKEVAATKAGGSKRFTDIDELDRQMAAVEKAAGIKARYEELQGHVK 744
            L+I ++A  +++KRAYRR AL+THPDVN AP A   F +V  AY+VLSD   R  Y+          RG  G+              G  T +++    +R W +Q              T + IDDSF  IFRD  G + S       L DVV FLE  VDGFS ++  EFE+++   +LQ +++E+EN   L+ +LR K ++  +D + ++ ++   +A  ++   D++ +DRQ+ AVEK A  +AR ++L+GH+K
Sbjct:  113 LDIEKSASLNDIKRAYRRLALQTHPDVNKAPDAAETFKQVCEAYKVLSDAEARKGYD--------LARGMQGSGFGSGGRRWTNVG-GRGTASSSSX-XSRGWYDQYGPFGGGAPGANEETAESIDDSFSSIFRDFVGNVGSNGGRGF-LEDVVSFLESNVDGFSEESDAEFEEILKGEDLQLVQDEIENLNFLIPKLREKQQQAKIDVMVAQGKLRTLQAAAAR---DLEGVDRQLEAVEKVAATQARVKDLEGHMK 356
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BLAST of mRNA_L-elsbetiae_contig9730.18703.1 vs. uniprot
Match: R7QFN2_CHOCR (J domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFN2_CHOCR)

HSP 1 Score: 130 bits (328), Expect = 5.030e-30
Identity = 97/269 (36.06%), Postives = 141/269 (52.42%), Query Frame = 1 
Query:    1 QVLEIPETADQSEVKRAYRRKALKTHPDVNAAPTAKADFGEVLNAYEVLSDERKRANYNRKRKFTNPFNRGRAGAXXXXXXXXXXXASW--GSSTYNAAKEEAARRWREQNPTPDDIDDSFGDIFRDLFGGIA---SXXXXXXVLNDVVDFLEDRVDGFSSDTSVE--------FEDLMASRNLQEMKEELENTRLLLEQLRIKSRKL-----SVDKITSEKEVAATKAGGSKRFTDIDELDRQMAAVEKAAGIKARYEELQGHVKASL 753
            ++L I   A+ S +KRAYRR ALK HPDV+ AP AK  F  V  AY VLSD   RA+Y+R         R ++G            ++W  GS+  N    E A++WREQNP P D++DSFG IF DLF G+A   S      +++D VDFLE++VDGF  D+S            D++ S ++  ++ E+++   +L+QL  +  KL     S+ K   E  V A +A GS  +T  D       A E+A+ +KA  +      + +L
Sbjct:  116 EILGIDRNANNSTIKRAYRRAALKNHPDVSKAPDAKERFMRVQEAYSVLSDSSTRASYDR---------RSQSG------YSSSSSSAWPGGSAGPNFDPTEFAKKWREQNPMPKDLNDSFGSIFSDLFSGVAGAASGATRPGIMDDFVDFLENQVDGFGVDSSGYASDDEDDGLSDILKSSDVDVLQAEIDDAHFVLQQLETRQSKLDEEAASLQKRADEWRVRANRAEGSMDYTTRD------TAKERASDLKAEAKRFSSRSRKTL 363
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BLAST of mRNA_L-elsbetiae_contig9730.18703.1 vs. uniprot
Match: A0A7S2RUY7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RUY7_9STRA)

HSP 1 Score: 122 bits (305), Expect = 4.710e-27
Identity = 96/255 (37.65%), Postives = 142/255 (55.69%), Query Frame = 1 
Query:    1 QVLEIPETADQSEVKRAYRRKALKTHPDVNAAPTAKADFGEVLNAYEVLSDERKRANYNRKRKFTNPFNRGRAGAXXXXXXXXXXXASWGSSTYNAAKEEAARRWREQNPTPDDIDDSFGDIFRDLF---------GGIASXXXXXXVLNDVVDFLEDRVDGFSSDTSVEFEDLMASRNLQEMKEELENTRLLLEQLRIKSRKLSVDKITSEKEVAATKAGGSKRFTDIDELDRQMAAVEKAAGIKARYEELQGH 738
            +VL + ETA +SEVKRAYRR A K+HPDV+ +P A+  F +++ AYEVLSD +KRA+++RKR++T          XXXXXXXXXXX                         P+DIDDSF  IF DL           G+        VLND+V+FLE +VD FS ++  + E+L+ S +++E++ E+E TR LLE +  + R LS         ++A +     +  D++ ++ +   V   AG KAR +++Q H
Sbjct:   70 EVLGVAETATESEVKRAYRRAATKSHPDVDPSPGARERFMKIVEAYEVLSDSKKRADFDRKRRWT---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEDIDDSFSQIFGDLLQGFVGGAVRSGVTGTMGARGVLNDLVEFLEAQVDDFSEESPEDLEELLESGSVEEIEAEIEATRTLLEAVEKRLRDLSXXXXXXXXXLSAWRLNNV-QIRDLETMEEEARLVSAIAGTKARIDDIQRH 314
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BLAST of mRNA_L-elsbetiae_contig9730.18703.1 vs. uniprot
Match: A0A6V1TPP7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TPP7_HETAK)

HSP 1 Score: 89.4 bits (220), Expect = 7.410e-17
Identity = 54/107 (50.47%), Postives = 74/107 (69.16%), Query Frame = 1 
Query:  424 DVVDFLEDRVDGFSSDTSVEFEDLMASRNLQEMKEELENTRLLLEQLRIKSRKLSVDKITSEKEVAATKAGGSKRFTDIDELDRQMAAVEKAAGIKARYEELQGHVK 744
            D+V FLE  VDGFSSDT+VEFE+LM S NL+E++ E+E   LL  QLR ++  L+ D+  +E  V A KA    R   ++ L+ +MA +EKAAG+KAR +E+ GHVK
Sbjct:    2 DLVSFLEKGVDGFSSDTTVEFEELMFSTNLKELELEMEAADLLAGQLRGRATGLARDRERAEAAVVAFKARAVGRAPSLETLEEEMALIEKAAGLKAREKEVLGHVK 108
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BLAST of mRNA_L-elsbetiae_contig9730.18703.1 vs. uniprot
Match: A0A5J4Z5Q5_PORPP (Chaperone protein DnaJ n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5Q5_PORPP)

HSP 1 Score: 87.4 bits (215), Expect = 3.720e-15
Identity = 85/274 (31.02%), Postives = 130/274 (47.45%), Query Frame = 1 
Query:    4 VLEIPETADQSEVKRAYRRKALKTHPDVNAAPTAKADFGEVLNAYEVLSDERKRANYNRKRKFTNPFNRGRAGAXXXXXXXXXXXASWGSSTYNAAKEEAARRWREQNPTPDDIDDSFGDIFRDLFG----GIASXXXXXX------VLNDVVDFLEDR------VDGFSSDTSVEFEDLMASRNLQEMKEELENTRLLLEQLRIKSRKLSVDKITSEKEVAATKAGGSKRFTDID------ELDRQMAAVEKAAGIKARYEELQGHVKASLGG 759
            VL + +TA + E+KRAYRR ALK HPDVN +P A A+FG +  AY+VL+D+ KR  Y+                           AS  S    +    +A  W+++    +  +DSFG IF DL      G+A XXXXXX      +++D + FLE +      V G S     EFE+L+ S + Q ++ ELE+   +LE +  +  KL   ++  E+  A     G +   D +      +LD+    V++    KA+ E      K++  G
Sbjct:   77 VLGVDKTASKVEIKRAYRRLALKAHPDVNKSPNAAAEFGRIQQAYDVLADDAKRRAYD---------------------IRMSTGASAASGRQQSRYRPSANAWQKEQEAYE-TNDSFGAIFSDLMSELGKGVAXXXXXXXXXXXAGLVDDFLTFLEKQTGAGFGVGGSSRTEEREFEELLRSGSAQVLQAELEDVDFVLEMMAARRTKLREQQVMQERRRATAVETGERASYDAELSRVRAKLDKVERQVDEQRARKAKIEAALLRAKSTRAG 328
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BLAST of mRNA_L-elsbetiae_contig9730.18703.1 vs. uniprot
Match: A0A7S0E9X9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E9X9_9EUKA)

HSP 1 Score: 84.3 bits (207), Expect = 1.990e-14
Identity = 76/203 (37.44%), Postives = 112/203 (55.17%), Query Frame = 1 
Query:    7 LEIPETADQSEVKRAYRRKALKTHPDVNAAPTAKADFGEVLNAYEVLSDERKRANYNRKRKFTNPFNRGRAGAXXXXXXXXXXXASWGSSTYNAAKEEAARRWREQNPTPDDIDDSFGDIFRDLFGGIASXXXXXXVLNDVVDFLEDRVDGFSSDTSVEFEDLMASRNLQEMKEELENTRLLLEQLRIKSRKLSVDKITSEKE 615
            L + + A  +++K+AYR+ AL+ HPDVN A  A+  F  +  AY VLSD ++R  Y+ K      +  GRA  XXXXXXXXXXX         A ++   RRWRE+NPTP+D+ DSFG +  DL   +           D  + L+D      SD   E + L+ S +   ++EELE TR + E+L+ +  +L  + + +EKE
Sbjct:   46 LGVEQAATAAQIKQAYRKLALRNHPDVNKAADAQERFAGISEAYSVLSDPKQRGAYDLKN--GGSWGSGRASGXXXXXXXXXXXXXXXXXXXAAERQ---RRWREENPTPEDLGDSFGSLLGDLVSAVGKVVGG----GDWFELLQD----LQSD-GPELQTLLRSTDQALLREELEETRWVQERLKARQVRLRDEALEAEKE 234
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9730.18703.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS86_ECTSI1.800e-11479.76Heat shock protein 40 like protein/ DnaJ domain co... [more]
A0A6H5K7F7_9PHAE5.430e-4383.48HSP40 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A835YPK0_9STRA2.300e-3544.49J domain-containing protein n=1 Tax=Tribonema minu... [more]
A0A4D9DC11_9STRA1.260e-3335.27J domain-containing protein n=1 Tax=Nannochloropsi... [more]
W7TRF1_9STRA1.670e-3135.27Chaperone protein n=1 Tax=Nannochloropsis gaditana... [more]
R7QFN2_CHOCR5.030e-3036.06J domain-containing protein n=1 Tax=Chondrus crisp... [more]
A0A7S2RUY7_9STRA4.710e-2737.65Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6V1TPP7_HETAK7.410e-1750.47Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A5J4Z5Q5_PORPP3.720e-1531.02Chaperone protein DnaJ n=1 Tax=Porphyridium purpur... [more]
A0A7S0E9X9_9EUKA1.990e-1437.44Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9730contigL-elsbetiae_contig9730:779..7447 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score354.0
Seed ortholog evalue7.5e-95
Seed eggNOG ortholog2880.D7FS86
KEGG koko:K09510,ko:K09511
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein folding
EggNOG OGsCOG0484@1,KOG0714@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03110
Ec32 ortholog descriptionHeat shock protein 40 like protein/ DnaJ domain containing protein
Ec32 orthologEc-05_004970.1
Exons7
Model size1336
Cds size969
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9730.18703.1prot_L-elsbetiae_contig9730.18703.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9730 779..7080 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817037.0962503-CDS-L-elsbetiae_contig9730:778..8911622817037.0962503-CDS-L-elsbetiae_contig9730:778..891Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9730 779..891 +
1691683999.769865-CDS-L-elsbetiae_contig9730:778..8911691683999.769865-CDS-L-elsbetiae_contig9730:778..891Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9730 779..891 +
1622817037.109197-CDS-L-elsbetiae_contig9730:2055..22881622817037.109197-CDS-L-elsbetiae_contig9730:2055..2288Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9730 2056..2288 +
1691683999.7818427-CDS-L-elsbetiae_contig9730:2055..22881691683999.7818427-CDS-L-elsbetiae_contig9730:2055..2288Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9730 2056..2288 +
1622817037.120464-CDS-L-elsbetiae_contig9730:3205..33091622817037.120464-CDS-L-elsbetiae_contig9730:3205..3309Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9730 3206..3309 +
1691683999.7940836-CDS-L-elsbetiae_contig9730:3205..33091691683999.7940836-CDS-L-elsbetiae_contig9730:3205..3309Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9730 3206..3309 +
1622817037.1341717-CDS-L-elsbetiae_contig9730:4031..41121622817037.1341717-CDS-L-elsbetiae_contig9730:4031..4112Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9730 4032..4112 +
1691683999.805371-CDS-L-elsbetiae_contig9730:4031..41121691683999.805371-CDS-L-elsbetiae_contig9730:4031..4112Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9730 4032..4112 +
1622817037.144878-CDS-L-elsbetiae_contig9730:4800..48651622817037.144878-CDS-L-elsbetiae_contig9730:4800..4865Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9730 4801..4865 +
1691683999.8162436-CDS-L-elsbetiae_contig9730:4800..48651691683999.8162436-CDS-L-elsbetiae_contig9730:4800..4865Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9730 4801..4865 +
1622817037.155359-CDS-L-elsbetiae_contig9730:5074..52441622817037.155359-CDS-L-elsbetiae_contig9730:5074..5244Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9730 5075..5244 +
1691683999.8273177-CDS-L-elsbetiae_contig9730:5074..52441691683999.8273177-CDS-L-elsbetiae_contig9730:5074..5244Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9730 5075..5244 +
1622817037.1652002-CDS-L-elsbetiae_contig9730:6877..70801622817037.1652002-CDS-L-elsbetiae_contig9730:6877..7080Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9730 6878..7080 +
1691683999.8385186-CDS-L-elsbetiae_contig9730:6877..70801691683999.8385186-CDS-L-elsbetiae_contig9730:6877..7080Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9730 6878..7080 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817037.180202-UTR-L-elsbetiae_contig9730:7080..74471622817037.180202-UTR-L-elsbetiae_contig9730:7080..7447Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9730 7081..7447 +
1691683999.8492377-UTR-L-elsbetiae_contig9730:7080..74471691683999.8492377-UTR-L-elsbetiae_contig9730:7080..7447Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9730 7081..7447 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9730.18703.1

>prot_L-elsbetiae_contig9730.18703.1 ID=prot_L-elsbetiae_contig9730.18703.1|Name=mRNA_L-elsbetiae_contig9730.18703.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=323bp
QVLEIPETADQSEVKRAYRRKALKTHPDVNAAPTAKADFGEVLNAYEVLS
DERKRANYNRKRKFTNPFNRGRAGAGGGGGGGGGSGASWGSSTYNAAKEE
AARRWREQNPTPDDIDDSFGDIFRDLFGGIASGGGGGGVLNDVVDFLEDR
VDGFSSDTSVEFEDLMASRNLQEMKEELENTRLLLEQLRIKSRKLSVDKI
TSEKEVAATKAGGSKRFTDIDELDRQMAAVEKAAGIKARYEELQGHVKAS
LGGPGATRKQQRYHHHHHHHHHHHQQQQQQQRRRRRQQRRQQQQRDREWR
FKNASSSKTGAWGQEASRRPRG*
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mRNA from alignment at L-elsbetiae_contig9730:779..7447+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9730.18703.1 ID=mRNA_L-elsbetiae_contig9730.18703.1|Name=mRNA_L-elsbetiae_contig9730.18703.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6669bp|location=Sequence derived from alignment at L-elsbetiae_contig9730:779..7447+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGTGCTGGAGATCCCGGAAACGGCCGACCAATCCGAGGTCAAGAGGGC
GTACAGGCGGAAGGCGCTGAAGACGCACCCGGACGTGAACGCGGCGCCCA
CCGCCAAAGCCGAGTAAGCCACCTGTTGTATACTCCGCAGACACAGTAGT
CGGCCTCCTGCGCAGCCTGCTGGATCTTAGAGCGCGCGGTGCGGGGGGGG
CATCAGCGGTAGGCTTAGGGGGAGGGGGGGCGTCATGATCGAAAGGTCAA
GGTGTTGGTTTTTCACCGTTTCTGCCGCAGCGGAAGACCGAAAAACAGGC
TTGTAGTTAGCAGGGACCGCTCGCGAGTTTGAGCCCCCGACCCGCACGAC
GCTTGGCTCTCTCTCCCGTGGGCTCGCTTCGTGTTCTGGAGACAGCCAGC
CACTGGTTGCACCGCTTCGGCATTGTTACGCTCTGCTGCAGGGTAGATAT
TTTCTACCTTTTCCCCGCGTGTTGACTTGAGGTTCTTCACCCACAGCACC
AACACGATCCGACCGGACCACTCATCATGGTAGTGGTAAATTAACCGCAA
CGAAATCGCAGGTGGGGGGGGGGGGGGGGGGGGGGGGCTGGCCCCCTTCT
TTTTTAACGGGGGCGAAAAAGGTGAGGGGGGGCCCCCCCACAATTTTGGC
CCCGAAACCAACATTACCNNNNNNNNNNGTGTCTGTCGCGCCACACCCAC
CACACCACACCGGCGACCGGGAACTCAGCTGTGGGGGGGGGGGTAAAAAA
CGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTGCTG
TCACCAAAACTGGGTCTATTTTGTTTGTTTGGTTTTATCGAGAAATTTCC
CGTTGTGGATAAAACATTAACTTTTCGTAGCCAGACTTCCGTGCAGAGCA
AACGCGCTTCACTGGAAACCCGGATGGCGGATGGCGGATGGCGGATGGCG
ATGCTCTCCACCCACCCCCCCCAGCCGGCGTCCCGAAAAGTGCTCGCCAA
TTTGTTTTCCCTGGTTTTCTGCTTTTCGTGTTTTCGCCAAAACAATCGTC
CTCGCATTGTGCGTAACGAATGCCGCCCCCGCCCCTGCACCACCACAACC
CCGCTTGGGTAATATTTCTACCGCCCACCTTTAAAGCTATGTAGCTAGTA
ATAGCGTTCGAGCTCGCGAGTTTTGACCACAAAGCCAAAAACTTGGCTCC
GCTGCCCCCCCCTCCTCCTCCCTACGCGCGGGCGGGCTGGTGGACGGGCG
CGTGCCTTTGTGTTCTTGTTCCCGCAGCTTCGGGGAGGTGTTGAACGCCT
ACGAGGTGCTGTCGGACGAGAGGAAAAGAGCCAACTACAACAGGAAGCGC
AAGTTCACGAACCCGTTCAACCGAGGGAGGGCCGGGGCTGGAGGCGGCGG
CGGCGGCGGCGGCGGGAGCGGGGCTTCGTGGGGGAGCTCGACGTACAACG
CGGCCAAGGAAGAGGCGGCGCGGCGGTGGAGGGAGCAGAACCCCACCCCT
GACGACATAGGTGTGTCCGAGAGGGGAGAGGATGGAGGGTCCAAGAATGG
CTGGGCTTCCTGGGCAGGCTCTCTTGTTGAGACTACCTGTGTACCAGCGT
TACGTTCGGGTGTGGCGGGGAGAGAAAGAGCGCGCGTCGAGCTCACTGCT
TCGCGGAAGAGGGGGGTTGCTTACCTCGGGGCGGGGGGGGGGGGGGGGGG
GCCGGACATCGAGAACTTACCGCGGCGCCCCCCACCCCGGGATGCGTTTT
GGGGGAGTGTTTGCCCAGAGACAGCAGNNNNNNNNAGGGGGCGGGGGGGG
GGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGTCCGTACCAAGCGTATGTACC
GCCGCGCCACACACCTTGGATCGAGGTTTTGAGCTTGGTTGCTCTAGATA
CAGTAGGGAGCGTGCTTAACCACATACTTCTACACGCCTGCTGGTGTGTC
TCCGGAGAGGCCCCTCCCTCGACAAGATCGTTTTTGTTTTTGGCGTCACT
CTTTGGAGCGTTGCCGCCCGCGTTGCTGCGGGGCGATCGAGATACTCGGC
CTTGGAAATCGATCAGGGACGGGGGGGGGGGCACAGTGGTATCTGATGCA
ACCTGGGGCGGCGCAGCACACGCGCCCTTCTTTGTATATATCCCGAAATC
CCTTTCCATGGACACACCCCTTCGCGCCTCATACGTAGATGTGCTCGATG
CGGGCGGATTTATTTGGCAAGGACGAGTGGAGCGCGAACGGTGATTTGTC
TGTCGATTAAGAACCAAGGATTCAGAGGCATTCGTGATGATATGGCCGCA
CGCGATGACTTGTTTGTCCCCCCCTCCCTCACACCAGTTCGTCCACCTCC
TTTTTTTTTCCGTGTGTTCCCTCCCAGACGACAGCTTCGGCGATATCTTC
CGGGACTTGTTTGGAGGTATCGCGTCTGGAGGAGGCGGGGGGGGGGTGTT
GAACGACGTAGTCGACTTCTTGGAGGACCGGGTGAGAGCCCGTGGATCAC
CTACCGAACCAGGGGATGTCTGTTGCGGGTGTTGGTGGTTGGTGCCGTTG
GCGGCGGCGGTGCTGTGTGCGGGGGGGTATTTGTATTCGTGACTCTCTAT
TGTGATTAGTTGTTTCAATTGCGGCCCCTCCAACTCCCGTTGCTGTTTTT
TGCAGTCTTCTCTCTCTCTCTCTCTCTCTCTGGGTGATGTCGCTCCGCGC
CAATCACGCGGCTTTCTTGACGCGGTACGGTCGTGAGCTCCGCCCAGCAC
CTGAGGCGGTTGCTCGCCCAGGGCCGTGGCTGCTGCTGCAGTCCATAGAC
CTTCAATCAGCCGGCGATTACCCGGCGTCGTACAATAGGGGTGCATCAGA
AGGCTAGAAAAAAAACGGTTTTGTTTTGCGCTTGAAGATCCATACCCCGC
CAATTTTTATGTCGTTCGGGTACCCTCGGGGTGCTCCCCCCCGCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCC
CGCGCTCCCCCCCCGCCGCGCCCCCCCCCCCCGCCCCCCCCCCCCCCCCC
CCCCCNNNNNNNNNNAAAAAAAACATGTTTTTTTTGTGTGTGGGGCACCC
CCCCCCCCCCTTTTTTTTTTCTGTGCGGCGCCCCCGGGGGGCCCCCCCCC
CCCCCCCCCCCCCCCCCCAACCTGCGCGCGCTGCTTCCCTCGGCGCTCCG
CAGGTGGACGGCTTTTCGTCGGACACTTCTGTGGAGTTTGAGGACCTGAT
GGCAAGCAGGAATCTCCAGGAGATGAAGGAAGAGGTGGGGCCCGGCCCGT
CGGTCACAGCCTCTGCGAGACGTGTCCGCGCGCTGCTTTCTGGGCGCCTG
CCCGCCTGCTGTGTGTGCCTGCCGTGCGCCGTGCGCCGATGCCCGCGAAC
GGCGGTTGCGCTAGAACCCATCGTCCGGCGGGCGGCGTTAGAACCCGGCG
TTGTTGTTGCGGCGTGCATCTGTTTTCGTCGTTCCGTGAACGAACGGCCT
GGGGTGGTTTGGCGGTGGTGGGTGGTGATTTGTCGGTCGCTCTCCTGAGA
TTGTGTTCCCATTATCCCCAACGCGGCGGCCGGATGGCAGGAGGGCTGTA
TACTGTTATGTACCACATGTAGCACGTGCAGATATGTCCTGGACGCGCCG
TGGGCCTGTTTTTCAGGCTGGACATGCACACCTGATGCGACTGACTGCGA
AGTGCTAACCGAGCACCTTCCCTGCCTGGCCTGTGTGTTTTGGGACCGCG
CGACCCCGTGCGCGTTGTGCGCTCCTGGCACCGAAAACAGATGCTTTGGT
GGGGTTAGCTCCGGTCCTCGTGGCAGCTGCGTGAAATAGAATCGACCGCA
GCAGTCTTGGTGTTGCGGAACGAAAAGCCCACCACCTCCACCTCCACCCT
CCCCCCCCCATCCACGGGGACCCTTGCGCTCGATATGTTCCACGTGCCGT
GCCGCCGTTGTGTTGTGCGCAGTTGGAAAACACGCGGCTGCTTCTGGAGC
AGCTGAGGATCAAGAGCCGGAAACTCAGCGTGGACAAGTGAGGAGCCGCG
GGTGTCTGTTTGTCTCTTCGCCCGGGTGCTTAGTTTCGGCGCCGCGTGGT
GTTGATGTTGCCGTCGCCAGCTCCTACAATACTTCTCCCTCCCCCCCTCC
CTCCCTCCCTACCCCCCCTACCTCTATTATCTATCTATCTATCTATCTGC
CCCCCCCTTCCCATTGTTTCTTCCCACGGCGGCTTCGCGCTGGAAGGATA
ACGTCGGAGAAGGAGGTCGCCGCCACGAAGGCCGGCGGCTCCAAGCGTTT
CACGGACATCGACGAGCTCGACCGCCAGATGGCCGCCGTCGAGAAAGCCG
CCGGGATCAAGGCGCGGTACGAGGAGCTGCAGGGGCACGTCAAGGCAAGC
CTCGGGGGGCCCGGCGGTTGGTAGAGTCTGTCTCGCCGGAAAGCAAGCGG
GACAGCAGTAGTGTTCGATACGATACCCTCTCCACTCCAGGGCGCCTTAC
CCACCACGCCCCCCCCCCCCCCCCCCCCCCTCTCTCCAGGCCTAGTCATG
TGGTGCATGCCGTTTTATACTTTTATTTTATACTTTTTTCTGCCGTGTAT
AAATACATGTCTATCTGATGCGAGCTTTTATGATCTCGGACGTTTCGTCT
CGCCGGCTGCACGGCCCCGATATGGCGAAGATGCAGCCTGCCGTTGGGAC
GCCCGCACACTGCATGCCGCAGCACGCTGCCCCCAGGGCATACATAAGCC
CCGCCGAAACGCACCGGTGCTGCCTGCGCGCCCTTCCAAGGTGCTGTGCG
ATCCCGCAACCTGCCTCTGCGAAGCCGTGTGCCTGCGTCCGTGACTCGCC
GTGCCTGCGGTAACGCCGACCTGCTCGCGTGCCTCTCTGTGTACCCTTCC
GCGCGATCGGATCATGCCACGAACAGCAGATCCGCTGATAAAGCGCCGTC
CGATCTATGTGCGATGAAGTATGTGATGTACATGCATAAGCGATATACGG
TAGATCTGTGGATCCAGCATCGTCACAAAATGTGGAAGTGTGGATCAAGC
GTCGTCACATCTGAGTGCTGTAGGTGACGCAAGATACCACACCCCCCTGG
GCCAATTTTTAGAGCTCCATTACATACTCCGTAACGAAGAGGGTGCCCGC
ACCAAACGACACATTTTCGGACAGCCCTCGAATAAATCTTTCCAACGCCA
CCCACCCCCTTTCGGCACACTGGCACTCTTCTTGCTGGGGAGTAATCGGG
CTTTGAAAATCTGTCCATGGGGGGGAGTGGTACATTGTGTCACCTACATA
CGGTATATGCAGTTCTGTGGGTCAAGCGTCGTCACGTCTGTGTGCTACAT
ACACAGAATGCTGGCATGAGTGGCATTTCCATTCATAAGAGCCCTCTCTG
TGCTCACTCGCTCTGTCTACCTACCGCGTGTTCGTTTTGTTTTATCGAAC
GACGGTAGGGACAGGGATGTAGTGACGCCTTATCCTTTTGGCCTTGTGAC
CCTCCGTTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CGCCGCCCCCGCCCCCCCCCCCCCCGCCCCCCCCCCCCACCCCCCCCCGC
GCCGCGGCGCCCCCGCNNNNNNNNNNTTGTTTTATTCAAAGAAGGTAGGG
ACAGGGTTGAGGTTACGCCTTTTCCTTTTGCCCTTTCGGTCCCCCGCCGC
CCCCCCCCCCCCCCCCCCGTACTTTCTTGCATGCGTTCGTGCGTGCACCC
CCTACTTGGCCCCCCGCCCGCCAAATCGTCGCCGGCGGACCGGCCGGCTG
ACGGTGCAGAGAGCTAACGCCCGCCTGGGACGACTGGAGAGAAAAGTGGC
CGATCTTGAGAGCGGGGTCGGTGAAGGAAGAGCTACCAGCAGCACCTACG
CTAGCGGCGGCGGCGGCGGCGGCGGCGGCGGTAGCGGCAGTGGTACAAAT
CGATCGCAGTATTCTTCCTCCTCCTCCTCGTCCTCCTCCTCCTCCTCCTC
CTCCGCTTACTCCTCGTCGCGAGGGTCGTCCAGCGGCGGCCCCCGACAGC
AACGCGGAAGCAGCAGCGGTACCACCACCACCACCACCACCACCACCACC
ACCACCAACAACAACAGCAGCAGCAGCGGCGGCGGCGGCGGCAACAGCGG
CGGCAGCAACAGCAGCGGGACCGGGAGTGGCGGTTCAAAAACGCCTCCTC
CTCGAAGACGGGTGCCTGGGGGCAGGAGGCGAGCCGACGACCCCGAGGTT
GAGGCTGAGCTTGCCAGGATGAAGCGCGAGATGGGAATGAAGTAGATGGT
CGACTGGGGCCCGTTGTGTGTATGTAGTCGGGGGCGGCGGGGGCAGGGCA
TGTGCGTCGAGGAAGACAATTGGGAGCCGAAGAGAGGGTTGTTGAAACGA
TGAAATCTTTGGCGGAAAGAAACCGAAAAGAAAAACAGCGCAGAGGACGG
TTCGCATGGTGTACATACAGCAGTGTGGAGTCCAATGGAGCCTGAGCTAG
CTCGGGGGTAAGGCTTTTTTTATTAAACATATTAGTAAATATATCTGTGA
TCAAACATTTCACCATTGGGCCCCCCAGGGGGTGCCCTGTGCCCAAGCAT
TCCACTCGGTATTGTGACC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9730:779..7447+

>mRNA_L-elsbetiae_contig9730.18703.1 ID=mRNA_L-elsbetiae_contig9730.18703.1|Name=mRNA_L-elsbetiae_contig9730.18703.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1938bp|location=Sequence derived from alignment at L-elsbetiae_contig9730:779..7447+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGTGCTGGAGATCCCGGAAACGGCCGACCAATCCGAGGTCAAGAGGGC
GTACAGGCGGAAGGCGCTGAAGACGCACCCGGACGTGAACGCGGCGCCCA
CCGCCAAAGCCGACAGGTGCTGGAGATCCCGGAAACGGCCGACCAATCCG
AGGTCAAGAGGGCGTACAGGCGGAAGGCGCTGAAGACGCACCCGGACGTG
AACGCGGCGCCCACCGCCAAAGCCGACTTCGGGGAGGTGTTGAACGCCTA
CGAGGTGCTGTCGGACGAGAGGAAAAGAGCCAACTACAACAGGAAGCGCA
AGTTCACGAACCCGTTCAACCGAGGGAGGGCCGGGGCTGGAGGCGGCGGC
GGCGGCGGCGGCGGGAGCGGGGCTTCGTGGGGGAGCTCGACGTACAACGC
GGCCAAGGAAGAGGCGGCGCGGCGGTGGAGGGAGCAGAACCCCACCCCTG
ACGACATAGCTTCGGGGAGGTGTTGAACGCCTACGAGGTGCTGTCGGACG
AGAGGAAAAGAGCCAACTACAACAGGAAGCGCAAGTTCACGAACCCGTTC
AACCGAGGGAGGGCCGGGGCTGGAGGCGGCGGCGGCGGCGGCGGCGGGAG
CGGGGCTTCGTGGGGGAGCTCGACGTACAACGCGGCCAAGGAAGAGGCGG
CGCGGCGGTGGAGGGAGCAGAACCCCACCCCTGACGACATAGACGACAGC
TTCGGCGATATCTTCCGGGACTTGTTTGGAGGTATCGCGTCTGGAGGAGG
CGGGGGGGGGGTGTTGAACGACGTAGTCGACTTCTTGGAGGACCGGACGA
CAGCTTCGGCGATATCTTCCGGGACTTGTTTGGAGGTATCGCGTCTGGAG
GAGGCGGGGGGGGGGTGTTGAACGACGTAGTCGACTTCTTGGAGGACCGG
GTGGACGGCTTTTCGTCGGACACTTCTGTGGAGTTTGAGGACCTGATGGC
AAGCAGGAATCTCCAGGAGATGAAGGAAGAGGTGGACGGCTTTTCGTCGG
ACACTTCTGTGGAGTTTGAGGACCTGATGGCAAGCAGGAATCTCCAGGAG
ATGAAGGAAGAGTTGGAAAACACGCGGCTGCTTCTGGAGCAGCTGAGGAT
CAAGAGCCGGAAACTCAGCGTGGACAATTGGAAAACACGCGGCTGCTTCT
GGAGCAGCTGAGGATCAAGAGCCGGAAACTCAGCGTGGACAAGATAACGT
CGGAGAAGGAGGTCGCCGCCACGAAGGCCGGCGGCTCCAAGCGTTTCACG
GACATCGACGAGCTCGACCGCCAGATGGCCGCCGTCGAGAAAGCCGCCGG
GATCAAGGCGCGGTACGAGGAGCTGCAGGGGCACGTCAAGGCAAGCCTCG
GGGGGCCCGGCGGATAACGTCGGAGAAGGAGGTCGCCGCCACGAAGGCCG
GCGGCTCCAAGCGTTTCACGGACATCGACGAGCTCGACCGCCAGATGGCC
GCCGTCGAGAAAGCCGCCGGGATCAAGGCGCGGTACGAGGAGCTGCAGGG
GCACGTCAAGGCAAGCCTCGGGGGGCCCGGCGCAACGCGGAAGCAGCAGC
GGTACCACCACCACCACCACCACCACCACCACCACCACCAACAACAACAG
CAGCAGCAGCGGCGGCGGCGGCGGCAACAGCGGCGGCAGCAACAGCAGCG
GGACCGGGAGTGGCGGTTCAAAAACGCCTCCTCCTCGAAGACGGGTGCCT
GGGGGCAGGAGGCGAGCCGACGACCCCGAGGTTGACAACGCGGAAGCAGC
AGCGGTACCACCACCACCACCACCACCACCACCACCACCACCAACAACAA
CAGCAGCAGCAGCGGCGGCGGCGGCGGCAACAGCGGCGGCAGCAACAGCA
GCGGGACCGGGAGTGGCGGTTCAAAAACGCCTCCTCCTCGAAGACGGGTG
CCTGGGGGCAGGAGGCGAGCCGACGACCCCGAGGTTGA
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