mRNA_L-elsbetiae_contig9726.18701.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9726.18701.1
Unique NamemRNA_L-elsbetiae_contig9726.18701.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig9726.18701.1 vs. uniprot
Match: D8LUA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA5_ECTSI)

HSP 1 Score: 543 bits (1398), Expect = 5.470e-194
Identity = 266/288 (92.36%), Postives = 275/288 (95.49%), Query Frame = 1 
Query:    1 MAMTQQTNSRADLVSNSLGGDCLPAMVTSKSSDMFKMRRTLMDSYNETVRSAPKIGFGTAGRPPLNDGGAEAPGPGAYQLKSTMFVNPSSMIRSPPSFTMRGREKFGSPDLKAIDRTCQMEPGPGHYKFAIVNPQEDNAPKYTFPKDAGAEIRENVVRAPGPGQYNIHPGVGKQVLSTKRSHAGVGFGTGDRPDLLVQSTADVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKAPRMGKSGSLEDVAPGPGNYRLPPGICGRGAASPYPSAPAATLSGREKFGSPFGW 864
            MAMT Q NSRADLVSNSLGG+ LPA   SKSSD+ KMRRTLMDSYNETVRSAPKIGFGTAGRPPL DGGAEAPGPGAYQLKSTMFVNPSSMIRSPPSFTMRGREKFGSPDLKAIDRTCQ+EPGPGHYK AIVNPQE+NAPKYTFPKDAGA IRENVVRAPGPG+YN+HPGVGKQVLSTKRSH GVGFGTG+RPDLLVQSTADVGPGEYSIPGSTGERQVDSR+CNKSGAKFSKA RMGK GSLEDVAPGPGNYRLPPGICG+GAASPYPSAPAATLSGREKFGSPFGW
Sbjct:    1 MAMTTQQNSRADLVSNSLGGEYLPAATKSKSSDILKMRRTLMDSYNETVRSAPKIGFGTAGRPPLQDGGAEAPGPGAYQLKSTMFVNPSSMIRSPPSFTMRGREKFGSPDLKAIDRTCQLEPGPGHYKLAIVNPQEENAPKYTFPKDAGAMIRENVVRAPGPGRYNLHPGVGKQVLSTKRSHNGVGFGTGNRPDLLVQSTADVGPGEYSIPGSTGERQVDSRRCNKSGAKFSKAVRMGKPGSLEDVAPGPGNYRLPPGICGQGAASPYPSAPAATLSGREKFGSPFGW 288
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BLAST of mRNA_L-elsbetiae_contig9726.18701.1 vs. uniprot
Match: A0A835YVV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVV8_9STRA)

HSP 1 Score: 256 bits (655), Expect = 2.710e-81
Identity = 141/271 (52.03%), Postives = 174/271 (64.21%), Query Frame = 1 
Query:  106 KMRRTLMDSYNETVRSAPKIGFGTAGRPPLNDGGAEAPGPGAYQLKSTMFVNPSSMIRSPPSFTMRGREKFGSPDLKAIDRTCQMEPGPGHYKFA-IVNPQEDNAPKYTFPKDAGAEIRENVVR--APGPGQYNIHPGVGKQVLSTKRSHAGVGFGTGDRPDLLVQSTADVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKA---PRMGKSG------------SLEDVA--PGPGNYRLPPGICGRGAASPYPSAPAATLSGREKFGSPF 858
            KM RT++DSYN TV  AP++GFGTA RP L DGG + PGPGAY +KSTMF NP S  RSPP F++RGREKFGSPDLKA DR  QMEPGP  YK   I   ++   P Y+FP+ + A+      R  +PGPG Y +   VGKQVLSTKRSH+G  FGTG RP L+  ST D+GPG+Y IPG+ G +QVDSRK     ++F+K    P++ K G            + +D A  PG G Y +P  +  R   S + S P A +SGREKFGSPF
Sbjct:    2 KMGRTVIDSYNATVPMAPRVGFGTADRPALLDGGDDVPGPGAYAIKSTMFKNPRSCFRSPPCFSIRGREKFGSPDLKACDRATQMEPGPAAYKIPHIAGSEQRQPPAYSFPRSSWAKSDAVTARDISPGPGTYALPAAVGKQVLSTKRSHSGPAFGTGGRPPLISVSTDDIGPGDYEIPGNLGTKQVDSRKTTHQASRFAKPGGPPKVKKGGHGAHPQTPAESHAEDDFAHVPGAGAYNIPSTLV-RNPCSMFRSPPVARMSGREKFGSPF 271
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BLAST of mRNA_L-elsbetiae_contig9726.18701.1 vs. uniprot
Match: A0A8J2SYT1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYT1_9STRA)

HSP 1 Score: 222 bits (566), Expect = 4.360e-68
Identity = 125/253 (49.41%), Postives = 167/253 (66.01%), Query Frame = 1 
Query:  118 TLMDSYNETVRSAPKIGFGTAGRPPLNDGGAEAPGPGAYQLKSTMFVN-PSSMIRSPPSFTMRGREKFGSPDLKAIDRTCQMEPGPGHYKFAIVNPQEDNAPKYTFPKDAGAEIRENVVRAPGPGQYNIHPGVGKQVLSTKRSHAGVGFGTGDRPDLL-VQSTADVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKAPRMGKSG-SLED---VAPGPGNYRLPPGICGRGAASPYPSAPAATLSGREKFGSPF 858
            +++DS+N T +++P   FG+A RP L+D     PG GAY +K+T+  N P S I S P F++R REKFG P L+A+D     EPGPG Y    +NP +DN PKY+FPK  G  I++    +PGPG Y I   VG+QVLSTK ++ G+GFG G+RP LL VQ+  DVGPGEY +  S   +QVDSRK      KFS++ R   S  +++D     PGPG Y+LP G+CG G++ P+ +AP A+LSGREKFGSPF
Sbjct:   10 SIIDSFNATKKTSPSYQFGSAIRPRLSDA-EPTPGAGAYSIKTTILGNVPDSRIVSTPQFSLRSREKFGDPMLRALDAGTASEPGPGWYTPKQINPNDDNPPKYSFPK--GHFIKDKARFSPGPGAYAIPSSVGRQVLSTKSNNNGMGFGQGERPPLLRVQN--DVGPGEYGVGISACRKQVDSRKKTSGFVKFSRSARDKTSSMTMQDELQARPGPGTYQLPSGLCGSGSSYPFRAAPRASLSGREKFGSPF 257
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BLAST of mRNA_L-elsbetiae_contig9726.18701.1 vs. uniprot
Match: F0YJJ1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJJ1_AURAN)

HSP 1 Score: 188 bits (477), Expect = 2.370e-53
Identity = 105/219 (47.95%), Postives = 140/219 (63.93%), Query Frame = 1 
Query:  160 KIGFGTAGRPPLNDGGAEAPGPGAYQLKSTMFVN-PSSMIRSPPSFTMRGREKFGSPDLKAIDRTCQMEPGPGHYKFAIVNPQEDNAPKYTFPKDAGAEIRENVVRAPGPGQYNIHPGVGKQVLSTKRSHAGVGFGTGDRPDLLVQSTADVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKAPRMGKSGSL----EDVAPGPGNYRLPPGICGRGAASP 801
            ++ FG+A RP L++     PG GAY +K+T+  N P S I S P F++R REKFG+P L+A+D     +PGPG Y    VNP++DNAPKY+FPK  G  I++    +PGPG Y I   VGKQVLSTK ++ G+GFG G+RP LL     DVGPGEY +  S  ++QVDSRK      KFS+  R   + +     E+  PGPG Y+LPPG+CG G++ P
Sbjct:   92 RVSFGSAIRPRLSEA-EPTPGAGAYSIKTTILGNVPDSKIHSAPQFSLRSREKFGNPMLRALDTETARQPGPGWYTPKQVNPKDDNAPKYSFPK--GHFIKDKARLSPGPGAYVIPSSVGKQVLSTKSNNNGMGFGQGERPPLLRVHN-DVGPGEYGVGISACKKQVDSRKKTSGFVKFSRCARDKATSTSAKDEEEALPGPGTYQLPPGLCGGGSSYP 306
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BLAST of mRNA_L-elsbetiae_contig9726.18701.1 vs. uniprot
Match: F0WEQ1_9STRA (Uncharacterized protein AlNc14C76G5101 n=2 Tax=Albugo TaxID=65356 RepID=F0WEQ1_9STRA)

HSP 1 Score: 134 bits (337), Expect = 9.540e-34
Identity = 89/240 (37.08%), Postives = 129/240 (53.75%), Query Frame = 1 
Query:  151 SAPKIGFGTAGRP-PLNDGGAEAPGPGAYQLKSTMFVNPSSMIRSPPSFTMRGREKFGSPDLKAID-RTCQMEPGPGHYKFAIVNPQEDNAPKYTFPKDAGAEIRENVVRAPGPGQYNIHPGVGKQVLSTKRSHAGVGFGTGDRPDLLVQSTADVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKAPRM--GKSGSLEDVAPGPGNYRLPPGICGRGAASPYPSAPAATLSGREKFGSPF 858
            +AP   FG++ RP P ND  A++PGPG+YQ+ ST+     S ++  PS ++ GR+KFGS    AID +     PGPG Y   +VN +E NAPK++  K   +    N  + PGPG Y     +G   LST++S+    F  G+R  L   +T DVGPG+Y +  ++  +Q  S     +   F    R    KS +L++   G G Y       G+ + S YPS+P  ++SGR KFGS F
Sbjct:   44 TAPYTVFGSSPRPKPSND--AKSPGPGSYQIPSTLGKAVLSTVQQAPSCSLSGRDKFGS----AIDVKNAASSPGPGDYTSKVVNLREQNAPKFSLGKKWNSSADSNK-KGPGPGAYETANCIGPTFLSTQKSNPASAFPRGERTSLTQNNTPDVGPGQYGVVLTSVGKQTISTLSTPASFSFGTQERSKPSKSKALDNA--GQGRYYSARSSVGKQSESIYPSSPGISMSGRTKFGSHF 274
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BLAST of mRNA_L-elsbetiae_contig9726.18701.1 vs. uniprot
Match: A0A8K1CPW0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPW0_PYTOL)

HSP 1 Score: 129 bits (325), Expect = 5.440e-32
Identity = 87/237 (36.71%), Postives = 132/237 (55.70%), Query Frame = 1 
Query:  151 SAPKIGFGTAGRPPLNDGGAEAPGPGAYQLKSTMFVNPSSMIRSPPSFTMRGREKFGSP-DLKAIDRTCQMEPGPGHYKFAIVNPQEDNAPKYTFPKDAGAEIRENVVRAPGPGQYNIHPGVGKQVLSTKRSHAGVGFGTGDRPDLLVQSTADVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKAPRMGKSGSLEDVAPGPGNYRLPPGICGRGAASPYPSAPAATLSGREKFGSPF 858
            +AP   FG++ RP  + G +++PGPGAYQ+ S++     S + + P+ ++ GREKFGS  D+K    T    PGPG Y   IVNP+E +APKY+  K    ++   + + PGPG+Y     +G+ VLST++ +    F   +R  L   STADVGPG+Y +  +   +Q  S   + +   F    R   + +  +V PGP +Y+ P    G+   S Y +AP  ++SGR KFGS F
Sbjct:   47 TAPTTVFGSSTRPQTSSG-SKSPGPGAYQIPSSIGKPILSTMNAAPACSISGREKFGSTSDMK----TAANSPGPGDYTSTIVNPRERSAPKYSLGKK-WTQL-SGMKKFPGPGEYEAPTTIGRTVLSTQKQNPMPAFPRVERKPLAATSTADVGPGQYGVVVAAVGKQPLSTLTSAAAFSFGNEQRSKLAKTGVEV-PGPASYQ-PKSSVGKQVESTYRTAPKISMSGRTKFGSHF 274
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BLAST of mRNA_L-elsbetiae_contig9726.18701.1 vs. uniprot
Match: K3WN56_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WN56_GLOUD)

HSP 1 Score: 120 bits (300), Expect = 2.580e-28
Identity = 86/239 (35.98%), Postives = 126/239 (52.72%), Query Frame = 1 
Query:  151 SAPKIGFGTAGRPPLNDGGAEAPGPGAYQLKSTMFVNPSSMIRSPPSFTMRGREKFGSP-DLKAIDRTCQMEPGPGHYKFAIVNPQEDNAPKYTFPKDAG--AEIRENVVRAPGPGQYNIHPGVGKQVLSTKRSHAGVGFGTGDRPDLLVQSTADVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKAPRMGKSGSLEDVAPGPGNYRLPPGICGRGAASPYPSAPAATLSGREKFGSPF 858
            +AP   FG++ RP    G  ++PGPGAYQ+ S++     S +   P+ ++ GREKFGS  D K    T    PGPG Y   IVNP+E  AP+Y+  K  G  +E++    ++PGPG Y     +G+  LST++S+    F   +R  L   +T DVGPG+Y++  +   +Q  S   + +   F    R   S    D  PGP +Y     + G+   S Y +AP  ++SGR KFGS F
Sbjct:   51 TAPVTVFGSSTRPHTTSGN-KSPGPGAYQIPSSIGKPVLSTMMQAPACSISGREKFGSTGDAKLSGST----PGPGDYTSEIVNPRERAAPRYSLGKKWGNLSEMK----KSPGPGSYESSTTLGRTFLSTQKSNPMPAFTKVERKPLTSGNT-DVGPGQYAVVVAAVGKQPISTLSSAASYSFGTELRTKVSRGTVDAVPGPNSYPSKSSV-GKQVESTYRTAPKCSMSGRTKFGSHF 278
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BLAST of mRNA_L-elsbetiae_contig9726.18701.1 vs. uniprot
Match: H3H517_PHYRM (Uncharacterized protein n=8 Tax=Peronosporaceae TaxID=4777 RepID=H3H517_PHYRM)

HSP 1 Score: 118 bits (296), Expect = 8.590e-28
Identity = 88/237 (37.13%), Postives = 118/237 (49.79%), Query Frame = 1 
Query:  151 SAPKIGFGTAGRPPLNDGGAEAPGPGAYQLKSTMFVNPSSMIRSPPSFTMRGREKFGSP-DLKAIDRTCQMEPGPGHYKFAIVNPQEDNAPKYTFPKDAGAEIRENVVRAPGPGQYNIHPGVGKQVLSTKRSHAGVGFGTGDRPDLLVQSTADVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKAPRMGKSGSLEDVAPGPGNYRLPPGICGRGAASPYPSAPAATLSGREKFGSPF 858
            +AP   FG+  RP    G A++PGPGAYQ+ S++     S +   PS ++ GREKFGS  DLK+  +     PGPG Y  AIVNP+E  AP Y+  K       +         +    P +G+ VLST++S+    F   +R  L   STADVGPG+YS+      RQ  S   + +   F    R     S  D  PGP  Y     + G    S Y +AP  ++SGR KFGS F
Sbjct:   44 TAPVTVFGSGTRPRTTSG-AKSPGPGAYQIPSSIGKPVLSTMVQAPSCSISGREKFGSTADLKSSAKF----PGPGDYTTAIVNPRERAAPSYSLGKKWSPMTGQKXXXXXXXXETT--PTIGRTVLSTQKSNPMSSFPKVERKPLRNASTADVGPGQYSVVVEAVGRQAVSTLTSAAAYSFGTESRSKTGRSTADGVPGPNMYDHKSSV-GWQVESTYRTAPKCSMSGRTKFGSHF 272
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BLAST of mRNA_L-elsbetiae_contig9726.18701.1 vs. uniprot
Match: W7T5U8_9STRA (Flagellar associated protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T5U8_9STRA)

HSP 1 Score: 115 bits (288), Expect = 6.100e-27
Identity = 81/210 (38.57%), Postives = 111/210 (52.86%), Query Frame = 1 
Query:  121 LMDSYNETVRSAPKIGFGTAGRPPL--NDGGAEAPGPGAYQLKSTMFVNPS-SMIRSPPSFTMRGREKFGSPDLKAIDRTCQMEPGPGHYKFA-------IVNPQEDNAPKYTFPKDAGAEIRENVVRAPGPGQYNIHPGVGKQVLSTKRSHAGVGFGTG-DRPDLLVQSTADV-----GPGEYSIPGSTGERQVDSRKCNKSGAKFSKA 702
            ++ SY     + P  GFG++ R  +  +  G + PGPGAY LKST+  + + S IRS   F++RGRE FGS  +   DR C  EPGPG Y  +       + NP+   AP+++FPK  G   R  +   PGPG Y+    +G QVLS++ S     FG G  R       T D+     GPG Y+   + G +QVDSRK N  G +F KA
Sbjct:   24 IITSYKGIFPATPSFGFGSSPRDTIAPSHSGNDTPGPGAYNLKSTLSGHVADSRIRSTNGFSLRGREGFGS-KIFTKDRACVDEPGPGAYLSSQSRKGGLLSNPKHRAAPQFSFPK--GCSPRNKLSIQPGPGHYHFKDTLGPQVLSSRASPPVSTFGKGRKRQSFTSDLTPDLTSSGGGPGFYNAVSACG-KQVDSRKRNGGGVRFGKA 229
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BLAST of mRNA_L-elsbetiae_contig9726.18701.1 vs. uniprot
Match: D0NDE2_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0NDE2_PHYIT)

HSP 1 Score: 115 bits (287), Expect = 1.570e-26
Identity = 86/251 (34.26%), Postives = 122/251 (48.61%), Query Frame = 1 
Query:  109 MRRTLMDSYNETVRSAPKIGFGTAGRPPLNDGGAEAPGPGAYQLKSTMFVNPSSMIRSPPSFTMRGREKFGSP-DLKAIDRTCQMEPGPGHYKFAIVNPQEDNAPKYTFPKDAGAEIRENVVRAPGPGQYNIHPGVGKQVLSTKRSHAGVGFGTGDRPDLLVQSTADVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKAPRMGKSGSLEDVAPGPGNYRLPPGICGRGAASPYPSAPAATLSGREKFGSPF 858
            ++ ++ +  +    +AP   FG+  RP  ++G +++PGPGAYQ+ S++     S +   PS ++ GREKFGS  DLK    T    PGPG Y   IVNP+E  AP Y+  K       +   +      Y   P +G+ VLST++S+    F   +R  L   STADVGPG+Y +      RQ  S   + +   F    R   S S  D       Y  P    G    S Y +AP  ++SGR KFGS F
Sbjct:   27 IKSSVGEQVDSRKTTAPYTVFGSGTRPRTHNG-SKSPGPGAYQIPSSIGKPVLSTMAMAPSCSISGREKFGSTADLK----TSAKFPGPGDYNTHIVNPRERAAPSYSLGKKWSPMAGDK--KXXXXXAYESSPTIGRTVLSTQKSNPVSSFPKVERKPLNASSTADVGPGQYGVVVEAVGRQTVSTVHSAAAFSFGTEARSRTSRSAADRIGS--KYYDPRSSVGTQVESTYRTAPKCSMSGRTKFGSHF 268
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9726.18701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D8LUA5_ECTSI5.470e-19492.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YVV8_9STRA2.710e-8152.03Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J2SYT1_9STRA4.360e-6849.41Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YJJ1_AURAN2.370e-5347.95Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
F0WEQ1_9STRA9.540e-3437.08Uncharacterized protein AlNc14C76G5101 n=2 Tax=Alb... [more]
A0A8K1CPW0_PYTOL5.440e-3236.71Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WN56_GLOUD2.580e-2835.98Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
H3H517_PHYRM8.590e-2837.13Uncharacterized protein n=8 Tax=Peronosporaceae Ta... [more]
W7T5U8_9STRA6.100e-2738.57Flagellar associated protein n=1 Tax=Nannochlorops... [more]
D0NDE2_PHYIT1.570e-2634.26Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9726contigL-elsbetiae_contig9726:920..6832 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score546.2
Seed ortholog evalue9.2e-153
Seed eggNOG ortholog2880.D8LUA5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Sperm-tail PG-rich repeat
EggNOG OGs2CN1A@1,2QT9S@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-14_004280.1
Exons9
Model size964
Cds size867
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9726.18701.1prot_L-elsbetiae_contig9726.18701.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9726 920..6735 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817036.806135-CDS-L-elsbetiae_contig9726:919..9691622817036.806135-CDS-L-elsbetiae_contig9726:919..969Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9726 920..969 +
1691683999.5122185-CDS-L-elsbetiae_contig9726:919..9691691683999.5122185-CDS-L-elsbetiae_contig9726:919..969Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9726 920..969 +
1622817036.8186302-CDS-L-elsbetiae_contig9726:2165..22771622817036.8186302-CDS-L-elsbetiae_contig9726:2165..2277Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9726 2166..2277 +
1691683999.5318065-CDS-L-elsbetiae_contig9726:2165..22771691683999.5318065-CDS-L-elsbetiae_contig9726:2165..2277Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9726 2166..2277 +
1622817036.8298345-CDS-L-elsbetiae_contig9726:2791..28801622817036.8298345-CDS-L-elsbetiae_contig9726:2791..2880Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9726 2792..2880 +
1691683999.5425868-CDS-L-elsbetiae_contig9726:2791..28801691683999.5425868-CDS-L-elsbetiae_contig9726:2791..2880Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9726 2792..2880 +
1622817036.8413413-CDS-L-elsbetiae_contig9726:3263..33481622817036.8413413-CDS-L-elsbetiae_contig9726:3263..3348Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9726 3264..3348 +
1691683999.5533073-CDS-L-elsbetiae_contig9726:3263..33481691683999.5533073-CDS-L-elsbetiae_contig9726:3263..3348Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9726 3264..3348 +
1622817036.8519855-CDS-L-elsbetiae_contig9726:4018..41051622817036.8519855-CDS-L-elsbetiae_contig9726:4018..4105Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9726 4019..4105 +
1691683999.564059-CDS-L-elsbetiae_contig9726:4018..41051691683999.564059-CDS-L-elsbetiae_contig9726:4018..4105Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9726 4019..4105 +
1622817036.8623824-CDS-L-elsbetiae_contig9726:4560..46591622817036.8623824-CDS-L-elsbetiae_contig9726:4560..4659Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9726 4561..4659 +
1691683999.5767806-CDS-L-elsbetiae_contig9726:4560..46591691683999.5767806-CDS-L-elsbetiae_contig9726:4560..4659Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9726 4561..4659 +
1622817036.874117-CDS-L-elsbetiae_contig9726:5178..53101622817036.874117-CDS-L-elsbetiae_contig9726:5178..5310Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9726 5179..5310 +
1691683999.595112-CDS-L-elsbetiae_contig9726:5178..53101691683999.595112-CDS-L-elsbetiae_contig9726:5178..5310Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9726 5179..5310 +
1622817036.8845706-CDS-L-elsbetiae_contig9726:6255..63391622817036.8845706-CDS-L-elsbetiae_contig9726:6255..6339Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9726 6256..6339 +
1691683999.6045625-CDS-L-elsbetiae_contig9726:6255..63391691683999.6045625-CDS-L-elsbetiae_contig9726:6255..6339Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9726 6256..6339 +
1622817036.8958254-CDS-L-elsbetiae_contig9726:6606..67351622817036.8958254-CDS-L-elsbetiae_contig9726:6606..6735Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9726 6607..6735 +
1691683999.6150806-CDS-L-elsbetiae_contig9726:6606..67351691683999.6150806-CDS-L-elsbetiae_contig9726:6606..6735Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9726 6607..6735 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817036.907751-UTR-L-elsbetiae_contig9726:6735..68321622817036.907751-UTR-L-elsbetiae_contig9726:6735..6832Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9726 6736..6832 +
1691683999.6262639-UTR-L-elsbetiae_contig9726:6735..68321691683999.6262639-UTR-L-elsbetiae_contig9726:6735..6832Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9726 6736..6832 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9726.18701.1

>prot_L-elsbetiae_contig9726.18701.1 ID=prot_L-elsbetiae_contig9726.18701.1|Name=mRNA_L-elsbetiae_contig9726.18701.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=289bp
MAMTQQTNSRADLVSNSLGGDCLPAMVTSKSSDMFKMRRTLMDSYNETVR
SAPKIGFGTAGRPPLNDGGAEAPGPGAYQLKSTMFVNPSSMIRSPPSFTM
RGREKFGSPDLKAIDRTCQMEPGPGHYKFAIVNPQEDNAPKYTFPKDAGA
EIRENVVRAPGPGQYNIHPGVGKQVLSTKRSHAGVGFGTGDRPDLLVQST
ADVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKAPRMGKSGSLEDVAPGP
GNYRLPPGICGRGAASPYPSAPAATLSGREKFGSPFGW*
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mRNA from alignment at L-elsbetiae_contig9726:920..6832+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9726.18701.1 ID=mRNA_L-elsbetiae_contig9726.18701.1|Name=mRNA_L-elsbetiae_contig9726.18701.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5913bp|location=Sequence derived from alignment at L-elsbetiae_contig9726:920..6832+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTATGACTCAACAAACCAACAGCAGGGCTGACCTGGTGTCGAATAG
GTAAGCGATACGCGGCTGTACACCAATGTGCTAGTAGTGTAACCTACCGT
GCGAGGCAATAATGGCTTGGTCATCCATGGTTTCGTTCGACAACAAAACG
GTGCTTGAAGCGTAGACCATAATATCTAGGCTAGTCTAGACTAGATAGAC
TAATCTACAAGCTTTATGTAGGTGATTATCATCAGGCAGCGCGGCATGCA
TACTGCACCTAGCAAGGTGAATCGGTGGTAAGAGAGACGAGTTTCTCTCT
CACGCATGCTTGCGCTACTTATAGGAAATCGTCCACTATACAAGCCAGCG
GGTCGGCGCCCAACCTTTGAAAAAATCGTTCGGGGAGCTACCAAAACGCT
ATTTTATGTAAATACTTACAGAACACATTCAGTCGGTTATGGCGTGCAGG
CCAGATACTTTGCACGGAAAAGTACCATGCTCAGCTTAGGTTCGTTCAAA
ATATGCCATCACGGAGATGCCCATGGAAAAAATAAATAAAAATTCCGAAT
TGCCAAACAGTGTTGAGAGCTGGTGGGTCAAATTTAACCTTAATTGGACC
GGTTTCGATCAATTTGTATTGTACCGTTTTCGGCCAAATTTTGACGATAT
TTACATTTTTCGTGACAGCAAAGCCAGACACACGACCGAGTGGAGTTTCA
GACGAGGCGTGGGTATCTTCTGTTAACGATGAGGCGAAAATAAAGAGCAA
CATATGCGTTTTTTTACGCATTGTTGCCATTTTTTTAGGCTTCTATTTTT
GTCTGTATTCTGTTGAAGGGGGGCGAAAACGATCATTTTTGGGGCAACCG
CTTTATTTTCGGCAACGGACCCACAGGCACGGCACCGTGCAAAAAAAAAA
TATATAGAATAAGAGACGGGTTTCAACTCAAAAAATGCCAAGGATTTCAA
AAATATCATCGCCTACTCATCGGACACGGAAGAATCCGTGTAAACATAAC
CGACTTTACTTATGTGTTGGAGGAAGTAGATACATATCTTTTGACTTCAG
AAGATTGCGAACCGCTCGCGGCTAGACTAATCCGGTCAAGCTTAAACCAT
ACCTGGTACCGCGGACTTTAGTGCACTAATACAATTATCACCTACGGAGT
ACGTGCAGAAAAGAGTGCCCGTGGGGAATGCAGTTTGAAACGAATTAAAT
CCGACGCTAACAAGTCTAGACTATTCCTCTCGGGTCTTGCTGGCAGCTTG
GGAGGTGATTGCCTGCCCGCCATGGTAACCTCCAAGTCGTCCGATATGTT
TAAGATGAGGCGAACGCTCATGGACAGCTACAATGAGACAGTGCGGAGTG
CTCCCAAGGTGCAGTTCTGGAAGTCTCCGAAGCTTTTTATGTATGTATCT
ACGAAGTATCTATACGAACAAGAAACTACGTTTAGTTTTGAATTCAATGG
CGTGTAACAGTAGCGGGGTCAGTAGCCAACGCGTTGATATCTCTGGCTTT
TCACGATCATATGTAGTACCCTTTTCAACGCGCGCCCTCCGATAACTGTC
TCAAAGCTGGTGTACGTAGTGGTGTACGAGTTAGAAAATACGTTAGAAGA
TACCTCACCCGTGTTGACTGCGGAGATCCTACATCGCCCATTACTTTATG
TTTTCAGTGACGTGGTCCATGTGTCCTGGCCTCATGCCCAAGCAAAGAAA
TCAACAAGAGAGGACGGATCAAGGGACCTCCAGGAGTCTTCAACTACGAT
CGGACGATATTCACGCAATCCCTCGGAGAGAGCTATGCAACACGCACACT
ATACATCCCACCATTTACATATGCAGAACCGCACATCGATGAAAATGTAT
GCAAACCACGCACGTACACCAGATTGGGTTCGGCACGGCCGGGCGCCCGC
CCCTGAATGATGGAGGGGCCGAAGCTCCTGGACCGGGAGCATATCAACTG
AAATCGACAATGTAAGCGACACAGGTTTTCCTCAAAATAAAAGGGGTAAC
GACCGACCCGAAGTTCCTTTCCCAAGGCGATGCACGGTTCTCGGCATTTC
ACGCTCGCCTGTCGTTGTACAACCAGAATTGGTGTTTTATTCAGAGAGGT
AGGCATGCACATAACTTTTGGCATTCAAGCATAGACAAGGTAGGGGACGT
GGATAAGGAATTTCACCTCACAAAAAGAAAGAAAGTACCTGGTACTTTAC
ACGCTTGCGAACCCCTCAACAACTCACAACCCCATGCGATCCTGAATCTG
CTACATACCCGGTAAAGATCCCTCCTTGTCACCCTCGACTAACAGCAAGT
CCGCGCCGTTGTTGTCGTCGCCGCCGATGCTGCCGCACAATCAGGTTTGT
GAACCCGAGCAGTATGATTCGGTCACCCCCTAGTTTCACCATGCGAGGAC
GCGAGAAGTTTGGATCTCCCGATTTGAAAGTGGGTGAAGTGATGCTGTTT
TGTCACAACGGGTGGGTATTGTCCTCCCTCCACACCTTCCAAGCCAACTA
CAAAAGCCAATTGCAAATGCCTTGCCAAATTCCCTGCCCCCCCGATTATG
TTGGCCCAGTATCTCTCGTGGCTGCAGAATGGCTTTGATGATGCCGTGTG
CGTTGACTCCCGCAAAATAAGACGGTCGTGTCTAGACTACCATGTTATCG
AGAGTGATGGCGGTGGTCATGTGCATCCCCATCGTTTCTAGTCGAGGAGG
GGGCGGGGCGGAGCGGGATGCTGAATCGTTTCTGATCGAACATTCTCCTG
CCGGTCCCAATCCGTTATGTTGAAGCAAGGGGGTGTTCTCAGGAAGAAGA
GTTGTTTGCCCGATGCTGATGGGCGGCGGTGCCGATGCTAACTAGAGGGT
GCCAGAGATATTATGGTTGGAGTGCACCAGCGCTGTAGTTGCAGAAAGGC
CCTTGGCCGCCAAGCGGGCCAGGGGGCGGAGCGGAGATACCATTTCCATC
CAGCACGGGTGGGAAAAGTGTACGGATGTTGTGTGTTGTCTCGGTTGCCA
GAGTCCGCCCATTCCCTTCTCAACATACACTCCTATACATGCGACTTTTA
TTTGTCCCGGAAATGACACGTAGCGCTGTTGTTGGGGAAACGAAAACAGG
CGATCGACCGTACGTGCCAAATGGAGCCCGGACCGGGGCACTATAAGTTT
GCCATCGTCAACCCTCAGGAGGACAATGCCCCAAAGGTATGTATGTGGCT
TTTGACGACTTTGATTGGGCGGAGATGTGAAGGTGTAAGCGTTCCGAAAT
CAGTACTTGCGATGCACGAATTTCGTCATTTTTAACTCTGCCACCACATC
ACGCACTTAAAGACTTAGGTTTGCTCGAGGATGGCTCGACTATGTATTGT
TTTGTGAATAAGTTGATGGAGAATGTGGTAGATCGCAGACAGGCTCAACG
CCGTGCCCCACCCTCTCCCGTTTGTCGTTTTTCGCTCAACCACTTCTTGG
CGATCTTGGCGATCTCGACGCTCGCGGCATCGCAGCCCCCCTCGTTTCAG
CTGCAGATGAACAACTTCGATGTCGTAAGGTAGCGCGAGGGGTGTTGTCG
AAAATCGTTTTAATGCTGAGATATTTTATGACGTTCGATCCTCGGCGCAT
GAACCACTTGCCGCGTGCTTCTTGCGGCTCTCGCAATGCAGTACACGTTT
CCCAAGGATGCTGGCGCAGAGATAAGAGAAAACGTGGTCCGTGCGCCGGG
GCCAGGTCAATACAACATACATCCCGGCGTGGGGAAGCAGGTATGTAAAA
GGTTCGATTGAGCTGGTCCGGGGAGAGTGTCCTTGGCGTGTCGATGGAGC
ACGTGCTGGCAGTACGTTCGTTTGTACGTGTGTTTACATTACATACTGCG
TAGGTTACTGCTGTGTTACGATTCCATGTGCGCGCAGCGGCAGCTTTTTT
GGCCCTGTCAGATCCTAAACACGGAAGTATTCCCTTGCTGTGCAAGTAGG
GCACCGAAGGGAAAAAAGCAAAGAAACACGCTGTGCTTTCGGCAGCAAAT
ATCGTTGTGCATGCGACAGTCAAAAACATGGCGCTCCTTACGGCGAACCC
TTGCCTTCTTAGGGCATGCCAAGAGAAGCGCAGTGGCGTCACAACGGGCT
TACCTAGGAGACGTTACCCTCAGCGAAGCCGTTTCTCCTTCGCGCCGTTT
AAACTGTCTACATATTATGTCTCTTTTCAAAAGTGCGTGTTGCACACCCC
GATACAAATACGCGTGAATGAACGAACGAATGCGATAATGCCGATGACCG
CCTCGAAAGGTTTTGTCGACAAAGCGGAGTCACGCCGGCGTGGGCTTCGG
GACGGGCGACCGGCCCGATTTACTGGTCCAGAGCACCGCCGACGTGGGGC
CCGGAGAGTACTCTATTCCAGGCTCGACCGGAGAACGCCAGGTATGCATT
ATACTTCGAAGTATATAGATACACTTTATATATACTTTATACATTTTTAT
TTTTTGCTTACGGATACCCATACGTTTACCAGCGATCGGACGAGGGTCCA
AACAAGTTTAGAAGCAGCGCACCATTCTTGGTGGTTGCGTAGTAACCGCA
GTGGTATGGTTTTTCGTTCTACCAATGTGCTGTGTCTACCCTGGGCACAG
GTACATTGATAGCCCCCCTGCTACAAAATGTTAGCAGGCTCAACAAGACA
ATGTTGTTGTCATCTTGTGTATCGGATGTACTCGTGGGAGGATAGAGGGT
TACGTATATGTGTGGTGACAGACAGGTGCATGTGCTTGGGTCAGAATATA
AAAAAAGAAAAAAAAGATAAAAAAAATACGCAAGCGTACTTCCCTGAAAA
GCGGCGAAAAGCCTTTTGGTTGTCGATCCACACGATGAGCCACCAGCAAG
CACCACGATCACACCCTTCAGTTCGTATATATATGTTCCGTTCTACATCC
CTGCCCTTGATCAACTACATTTGATTTTTTTGGTATTTATGTAGTTTAAA
CCTGCTCCTCTTCGAACGTTGGCCAGAGAAAGATATCGGAAGAAGGGCCG
TGGGTTACAATGGGGAGGAGACCGAGACTTGTTTGCACGGTGCAGTTGCA
GTGCGCACATGAGTTTAACCAAACCATGTGTATCTCTCCTGCCCCGAGTC
GCTCTGCGGGCGGTGTGCGGGCGATTGCACACCTTCCCTAAGCTCTGTGC
TGCTGAAACGCACACCCGTTCACTCGTTCGGATCGTCGTAACGTGCTGGA
CCAACCCTCGTAGCGTTCAGCAGCGCATGCTTGCGTCCTTTAGCTTTTTT
GTTGTGCTTCTGGCGGTCCCTCCCGCGCGCTGTCTCGATCATGCTCTCTC
AATGTGCGTCTAAAACGTAATTATCTATGTACAAAGGTCGACTCGAGAAA
GTGCAATAAGAGCGGGGCCAAGTTTTCCAAGGCCCCCAGGATGGGGAAGT
CCGGCAGCCTGGAAGACGTGGTGAGTCAGCCCATGCCAGCCGGCCTAAAA
TTCAGTCGCATCGACATGAATCTGCACCGCGGTCACACCCAACCAGGATT
GTAGGCGACCGCGCTATGATGCAGCGCGCACCTCCGTCCAGGGACGCTGC
AACCTTTTTTCTCTCCGTTGACTTGTTGCTTTGTTCTCTCTCTCCCCGCT
CCCCCGTTCTTTCCAGCACCTCTCTTTCATCACACCTTACCCTTTTCGTT
TGTTATTTATCAACTCCAACCGAATATCTCGTCACAGGCGCCCGGACCAG
GAAACTATCGCCTGCCCCCGGGCATCTGCGGGCGGGGCGCGGCGTCACCG
TACCCGTCGGCCCCCGCCGCCACTTTGAGCGGGCGGGAAAAATTCGGTTC
CCCGTTTGGGTGGTGACGGCGCCAACAACCACGCAACACCGAAAACTGTG
ATAGGCGGGTCGCTTTATCGAAGCATCATCTTCGTTGTGACTGTTTTTCT
TTTTGAGGGGCGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9726:920..6832+

>mRNA_L-elsbetiae_contig9726.18701.1 ID=mRNA_L-elsbetiae_contig9726.18701.1|Name=mRNA_L-elsbetiae_contig9726.18701.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1734bp|location=Sequence derived from alignment at L-elsbetiae_contig9726:920..6832+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTATGACTCAACAAACCAACAGCAGGGCTGACCTGGTGTCGAATAG
ATGGCTATGACTCAACAAACCAACAGCAGGGCTGACCTGGTGTCGAATAG
CTTGGGAGGTGATTGCCTGCCCGCCATGGTAACCTCCAAGTCGTCCGATA
TGTTTAAGATGAGGCGAACGCTCATGGACAGCTACAATGAGACAGTGCGG
AGTGCTCCCAAGCTTGGGAGGTGATTGCCTGCCCGCCATGGTAACCTCCA
AGTCGTCCGATATGTTTAAGATGAGGCGAACGCTCATGGACAGCTACAAT
GAGACAGTGCGGAGTGCTCCCAAGATTGGGTTCGGCACGGCCGGGCGCCC
GCCCCTGAATGATGGAGGGGCCGAAGCTCCTGGACCGGGAGCATATCAAC
TGAAATCGACAATATTGGGTTCGGCACGGCCGGGCGCCCGCCCCTGAATG
ATGGAGGGGCCGAAGCTCCTGGACCGGGAGCATATCAACTGAAATCGACA
ATGTTTGTGAACCCGAGCAGTATGATTCGGTCACCCCCTAGTTTCACCAT
GCGAGGACGCGAGAAGTTTGGATCTCCCGATTTGAAAGTTTGTGAACCCG
AGCAGTATGATTCGGTCACCCCCTAGTTTCACCATGCGAGGACGCGAGAA
GTTTGGATCTCCCGATTTGAAAGCGATCGACCGTACGTGCCAAATGGAGC
CCGGACCGGGGCACTATAAGTTTGCCATCGTCAACCCTCAGGAGGACAAT
GCCCCAAAGGCGATCGACCGTACGTGCCAAATGGAGCCCGGACCGGGGCA
CTATAAGTTTGCCATCGTCAACCCTCAGGAGGACAATGCCCCAAAGTACA
CGTTTCCCAAGGATGCTGGCGCAGAGATAAGAGAAAACGTGGTCCGTGCG
CCGGGGCCAGGTCAATACAACATACATCCCGGCGTGGGGAAGCAGTACAC
GTTTCCCAAGGATGCTGGCGCAGAGATAAGAGAAAACGTGGTCCGTGCGC
CGGGGCCAGGTCAATACAACATACATCCCGGCGTGGGGAAGCAGGTTTTG
TCGACAAAGCGGAGTCACGCCGGCGTGGGCTTCGGGACGGGCGACCGGCC
CGATTTACTGGTCCAGAGCACCGCCGACGTGGGGCCCGGAGAGTACTCTA
TTCCAGGCTCGACCGGAGAACGCCAGGTTTTGTCGACAAAGCGGAGTCAC
GCCGGCGTGGGCTTCGGGACGGGCGACCGGCCCGATTTACTGGTCCAGAG
CACCGCCGACGTGGGGCCCGGAGAGTACTCTATTCCAGGCTCGACCGGAG
AACGCCAGGTCGACTCGAGAAAGTGCAATAAGAGCGGGGCCAAGTTTTCC
AAGGCCCCCAGGATGGGGAAGTCCGGCAGCCTGGAAGACGTGGTCGACTC
GAGAAAGTGCAATAAGAGCGGGGCCAAGTTTTCCAAGGCCCCCAGGATGG
GGAAGTCCGGCAGCCTGGAAGACGTGGCGCCCGGACCAGGAAACTATCGC
CTGCCCCCGGGCATCTGCGGGCGGGGCGCGGCGTCACCGTACCCGTCGGC
CCCCGCCGCCACTTTGAGCGGGCGGGAAAAATTCGGTTCCCCGTTTGGGT
GGTGAGCGCCCGGACCAGGAAACTATCGCCTGCCCCCGGGCATCTGCGGG
CGGGGCGCGGCGTCACCGTACCCGTCGGCCCCCGCCGCCACTTTGAGCGG
GCGGGAAAAATTCGGTTCCCCGTTTGGGTGGTGA
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