mRNA_L-elsbetiae_contig9721.18693.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9721.18693.1
Unique NamemRNA_L-elsbetiae_contig9721.18693.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9721.18693.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9721contigL-elsbetiae_contig9721:3714..5103 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons3
Model size255
Cds size252
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9721.18693.1prot_L-elsbetiae_contig9721.18693.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9721 3714..5101 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817036.363647-CDS-L-elsbetiae_contig9721:3713..38041622817036.363647-CDS-L-elsbetiae_contig9721:3713..3804Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9721 3714..3804 +
1691683999.1897123-CDS-L-elsbetiae_contig9721:3713..38041691683999.1897123-CDS-L-elsbetiae_contig9721:3713..3804Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9721 3714..3804 +
1622817036.3774521-CDS-L-elsbetiae_contig9721:4081..42071622817036.3774521-CDS-L-elsbetiae_contig9721:4081..4207Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9721 4082..4207 +
1691683999.1990578-CDS-L-elsbetiae_contig9721:4081..42071691683999.1990578-CDS-L-elsbetiae_contig9721:4081..4207Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9721 4082..4207 +
1622817036.390154-CDS-L-elsbetiae_contig9721:5066..51011622817036.390154-CDS-L-elsbetiae_contig9721:5066..5101Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9721 5067..5101 +
1691683999.2081091-CDS-L-elsbetiae_contig9721:5066..51011691683999.2081091-CDS-L-elsbetiae_contig9721:5066..5101Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9721 5067..5101 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9721.18693.1

>prot_L-elsbetiae_contig9721.18693.1 ID=prot_L-elsbetiae_contig9721.18693.1|Name=mRNA_L-elsbetiae_contig9721.18693.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=84bp
IGLRRRTLRRTLRALRDRGRDGSNWARVVAGTGSRRIRVGGASVRARGPG
QGGDGCVVKGARQRCAGKRSNSGVAPGARQARAR
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mRNA from alignment at L-elsbetiae_contig9721:3714..5103+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9721.18693.1 ID=mRNA_L-elsbetiae_contig9721.18693.1|Name=mRNA_L-elsbetiae_contig9721.18693.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1390bp|location=Sequence derived from alignment at L-elsbetiae_contig9721:3714..5103+ (Laminarionema elsbetiae ELsaHSoW15)
ATTGGTCTCCGCCGAAGAACGCTCCGGAGGACTCTCCGAGCGCTTCGGGA
CCGTGGAAGGGATGGCAGCAACTGGGCTCGAGTCGTTGCTGGTGTGCTTC
CGTTGTTGTTGTTGTTGTCGTCGTTGTCGTTGTCGTTGTCGTTGTCGTTT
TTATGTTGTTTGTTTTATGTTATTGTTGCGGTGTTCTTGAGCTCTGCGCT
GCTGTTTCACAAGCGCCTGTACCCCAGTATTTTTCTGTGCAAGCACTAGT
GAAAATGGTCGTGGTTGTTCACGGGCATTACTGCGATAACCGGAGACCAA
CAAAGCACGTGCCGTAAACTCGCCGACTGCTTCAACGAATCGGCCTCCCT
CCCGCGAACCCCTCACAGGCACAGGCTCGAGGCGTATCCGAGTTGGAGGG
GCGTCTGTCAGAGCAAGGGGGCCAGGTCAAGGAGGTGATGGCTGTGTTGT
CAAGGGTGCAAGACAGCGCTGCGCAGGAAAGAGGAGCAACTCAGGTGATG
AATCGCCCTTTCTCCCCCCCCCCTCCCCATAGACCACTTGTGCGGAGTTG
AAGCTGCCTTCCCGGGGAGCTCAGCGACATGGAAAAGAAGAAGCTTGCTC
CCGGAACAAAGATCTCACGGCCTCATTTCTCACCACAGATATATCAACAC
GCATTCGACAGCATAGTACCGCCCACCACGGGATCGACCCAACATATCAG
TGCGGCAATCGAAGGGGGAAGAAAGCTGGGCGCCACCAGTACTGCACAAC
CTGCGGGCGACGCTCCTTGCACCCACGGCCCATTGCGGAACAAATAGTCT
ATATCTATCTATACCGCTTCGTTTTTTCCTCTCCTTGTTGTAGTAGATGG
GGGGGTATGTATGTGGGACTAGAGTTGGGTGGCCTGACCGGCATTTATTA
GGGTACCAAGAGAGAATCAGGGGGGGTGTACCCCCCCCGGTTGGGGGTGT
TGACGCAACTAGATTATGCCTGTAGACATACATATTTCGTACGTGTGAAC
TTCGAAGAGTGTGTCAACATTGATGACTGCGAGTCCGCCTGGAGGGTGAG
GATCACCGTGTCGCGCGGCACTTGTGTGATTCGGTTTGTTTGCATAGTGC
AGGCTGTTTGCTGTGGTGTGGCTTGGTTATAAGGCTATGAGTTATGTACA
TATTTAAGCACGTAGAGTAGGCACATCATCTCGACTACATATCTAGTCTC
TACACGTAGTTCACGTACATATTTCGCACAAATCCCCTCGCACGTGTGAT
GTAAAGAGAGAAATGAAGAGAACTCTTACCGCGTTGTGCTTCATACGCAC
GTGTGGTGTAAAGAGAGAAATGAAGAAGGCTCTTACCGCGTTGTGCTTCA
TAGGAGTGGCGCCTGGAGCGAGGCAGGCGCGAGCACGGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9721:3714..5103+

>mRNA_L-elsbetiae_contig9721.18693.1 ID=mRNA_L-elsbetiae_contig9721.18693.1|Name=mRNA_L-elsbetiae_contig9721.18693.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=504bp|location=Sequence derived from alignment at L-elsbetiae_contig9721:3714..5103+ (Laminarionema elsbetiae ELsaHSoW15)
ATTGGTCTCCGCCGAAGAACGCTCCGGAGGACTCTCCGAGCGCTTCGGGA
CCGTGGAAGGGATGGCAGCAACTGGGCTCGAGTCGTTGCTGATTGGTCTC
CGCCGAAGAACGCTCCGGAGGACTCTCCGAGCGCTTCGGGACCGTGGAAG
GGATGGCAGCAACTGGGCTCGAGTCGTTGCTGGCACAGGCTCGAGGCGTA
TCCGAGTTGGAGGGGCGTCTGTCAGAGCAAGGGGGCCAGGTCAAGGAGGT
GATGGCTGTGTTGTCAAGGGTGCAAGACAGCGCTGCGCAGGAAAGAGGAG
CAACTCAGGCACAGGCTCGAGGCGTATCCGAGTTGGAGGGGCGTCTGTCA
GAGCAAGGGGGCCAGGTCAAGGAGGTGATGGCTGTGTTGTCAAGGGTGCA
AGACAGCGCTGCGCAGGAAAGAGGAGCAACTCAGGAGTGGCGCCTGGAGC
GAGGCAGGCGCGAGCACGGGAGTGGCGCCTGGAGCGAGGCAGGCGCGAGC
ACGG
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