mRNA_L-elsbetiae_contig9719.18689.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9719.18689.1 vs. uniprot
Match: D8LG25_ECTSI (NADH dehydrogenase (Ubiquinone) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG25_ECTSI) HSP 1 Score: 300 bits (767), Expect = 1.510e-94 Identity = 157/182 (86.26%), Postives = 170/182 (93.41%), Query Frame = 1 Query: 1 EEIKADLLVWTAGSQPSSLVQSLDVQKDSRGRVEVDRRLRLVDAAAAPAGHGGDVYCLGDIAAVEGLDLGCNAQVALQQSDYVAYNIWAGTENRKPLDFRFLNLGEMMNLGGLDGSVTTLGGRVKLTGKAAGLARRAVYAVRMPTNPQRLRAAASAAAGTAFSVTNAILDKGLDILERSSKD 546 EEI ADLLVWTAGSQPSSL+ SLDV+KD+RGR+EVDRRLRL+DAA G G DVYCLGDIAAVEGL+LGCNAQVALQQSDYVAYNIWA E RKPLDFRFLNLGEMMNLGGLDGS+TTLGGRVKL+GKAAGLARRAVYAVRMPTNPQR+RAAASAAAGTAFSVTNAI+DKGL+ +ERSSK+ Sbjct: 363 EEIMADLLVWTAGSQPSSLLDSLDVRKDARGRIEVDRRLRLIDAAGNDGGVG-DVYCLGDIAAVEGLELGCNAQVALQQSDYVAYNIWADKERRKPLDFRFLNLGEMMNLGGLDGSLTTLGGRVKLSGKAAGLARRAVYAVRMPTNPQRVRAAASAAAGTAFSVTNAIIDKGLNFIERSSKE 543
BLAST of mRNA_L-elsbetiae_contig9719.18689.1 vs. uniprot
Match: A0A6H5JVX1_9PHAE (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVX1_9PHAE) HSP 1 Score: 162 bits (410), Expect = 2.460e-42 Identity = 81/102 (79.41%), Postives = 93/102 (91.18%), Query Frame = 1 Query: 1 EEIKADLLVWTAGSQPSSLVQSLDVQKDSRGRVEVDRRLRLVDAAAAPAGHGGDVYCLGDIAAVEGLDLGCNAQVALQQSDYVAYNIWAGTENRKPLDFRFL 306 EEI ADLLVWTAGSQPSSL++ LDV+KD+RGR+EVDR+LR+V+AA + AG GDVYCLGDIAAVEGL+LGCNAQVALQQSDYVAYNIWA E RKPLDFR++ Sbjct: 376 EEIMADLLVWTAGSQPSSLLEPLDVRKDARGRIEVDRKLRVVEAAGS-AGGVGDVYCLGDIAAVEGLELGCNAQVALQQSDYVAYNIWADKERRKPLDFRWV 476
BLAST of mRNA_L-elsbetiae_contig9719.18689.1 vs. uniprot
Match: A0A836CDT3_9STRA (NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDT3_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.170e-37 Identity = 92/189 (48.68%), Postives = 125/189 (66.14%), Query Frame = 1 Query: 1 EEIKADLLVWTAGSQPSSLVQSLD-VQKDSRGRVEVDRRLRLVDAAAAPAGHGGD-VYCLGDIAAVEGLD-LGCNAQVALQQSDYVAYNIWAGTENRK--PLDFRFLNLGEMMNLGGLDGSVTTLGGRVKLTGKAAGLARRAVYAVRMPTNPQRLRAAASAAAGTAFSVTNAILDKGLDILERSSKDRQ 552 E ++ADL+VWTAGS+P+ L++ ++ + D+RGRV V L A G D VYCLGD AAV+G D + AQ A+QQSDYVA+N A R+ PL FR+++LG+M++LG DG+++ LG RV L G AA ARRAVYA+RMPT PQR AAAS A TA ++ +LD GL +L++ R+ Sbjct: 282 ETLRADLIVWTAGSRPNGLLRGVEGLSLDARGRVRVSATL---------AADGLDSVYCLGDAAAVDGADGVPATAQAAMQQSDYVAWNGGAAARRRQRAPLPFRYMDLGQMVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPTAPQRAAAAASIAVNTAAKASSLLLDMGLSVLDKLMDKRE 461
BLAST of mRNA_L-elsbetiae_contig9719.18689.1 vs. uniprot
Match: A0A7S3C6V0_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3C6V0_9EUKA) HSP 1 Score: 113 bits (283), Expect = 3.570e-26 Identity = 74/166 (44.58%), Postives = 102/166 (61.45%), Query Frame = 1 Query: 4 EIKADLLVWTAGSQPSSLVQSLDVQKDSRGRVEVDRRLRLVDAAAAPAGHGGDVYCLGDIA---AVEGLDLGCNAQVALQQSDYVAYNIWAGTENRKPLDFRFLNLGEMMNLGGLDGSVTTLGGRVKLTGKAAGLARRAVYAVRMPTNPQRLRAAASAAAGTAFSV 492 EI ADL++W AGS+PSSL+ SL + D G+V DR +R+ AAA G G ++ LGD A + G + AQ A+QQ+DYVA+N+ A +N K L FR+ +LGEM++LG +V++LG +K+ G A RRA+YA RMPT Q + S A AF V Sbjct: 70 EIPADLVLWAAGSRPSSLLPSLQIPLDPNGQVVTDRFMRV---AAAEDGVG-KLFALGDAAKCGTLTGSETPSTAQAAMQQADYVAWNVRASLQNDKLLPFRYQDLGEMLSLGEDSAAVSSLG-LLKVKGSAGSNLRRAIYAARMPTTAQAAKVGLSWATDAAFGV 230
BLAST of mRNA_L-elsbetiae_contig9719.18689.1 vs. uniprot
Match: A0A7S2HB73_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HB73_9EUKA) HSP 1 Score: 114 bits (284), Expect = 3.960e-26 Identity = 72/164 (43.90%), Postives = 97/164 (59.15%), Query Frame = 1 Query: 4 EIKADLLVWTAGSQPSSLVQSLDVQKDSRGRVEVDRRLRLVDAAAAPAGHGGDVYCLGDIAAVEGLDLGC---NAQVALQQSDYVAYNIWAGTENRKPLDFRFLNLGEMMNLGGLDGSVTTLGGRVKLTGKAAGLARRAVYAVRMPTNPQRLRAAASAAAGTAF 486 E++ADL+VWTAG+QPS++V +L + DS GR+ D LR+ + P+ +Y LGD A V+G G AQ A+QQ+DY A+NI A + L FR+ LGE ++ G SV LG +KL G+ A ARRAVYA RMPT Q ++ S A AF Sbjct: 88 ELEADLIVWTAGTQPSAVVAALGLPTDSSGRIAADPMLRV---SGRPS-----LYALGDAAVVQGAHGGAVPSTAQAAMQQADYAAWNIRAALRAQPALAFRYTALGETLSFGKDAASVAALGHLIKLNGRLASAARRAVYAARMPTPQQAVKVGLSWAVDAAF 243
BLAST of mRNA_L-elsbetiae_contig9719.18689.1 vs. uniprot
Match: A0A7S2AZV0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AZV0_9STRA) HSP 1 Score: 111 bits (277), Expect = 4.590e-26 Identity = 70/146 (47.95%), Postives = 91/146 (62.33%), Query Frame = 1 Query: 28 WTAGSQPSSLVQSL-DVQKDSRGRVEVDRRLRLVDAAAAPAGHGGDVYCLGDIAAVEGLDLGCNAQVALQQSDYVAYNIWAGTENRKPLDFRFLNLGEMMNLGGLDGSVTTLGG--RVKLTGKAAGLARRAVYAVRMPTNPQRLRA 456 WTAGS+P++++ L V D+ GR+ VD LR+ AG G V+ LGD A +E L NAQVA QQS+Y A+N+WA + KPL FR+ LGEM+ LG D SV G +KL+G A ARR VYA RMPT+ QR++A Sbjct: 1 WTAGSRPNAMLGGLAGVTCDAAGRLVVDNTLRVQSPEGRAAG--GVVFALGDNAVLELGPLPPNAQVAFQQSEYAAWNVWASLNDEKPLAFRYTALGEMLTLGANDASVAGPQGLEALKLSGPLAAAARRLVYAARMPTSEQRVKA 144
BLAST of mRNA_L-elsbetiae_contig9719.18689.1 vs. uniprot
Match: A0A0G4FP32_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FP32_VITBC) HSP 1 Score: 116 bits (291), Expect = 3.680e-25 Identity = 68/155 (43.87%), Postives = 95/155 (61.29%), Query Frame = 1 Query: 7 IKADLLVWTAGSQPSSLVQSLD--VQKDSRGRVEVDRRLRLVDAAAAPAGHGGDVYCLGDIAAVEGLDLGCNAQVALQQSDYVAYNIWAGTENRKPLDFRFLNLGEMMNLGGLDGSVTTLGGRVKLTGKAAGLARRAVYAVRMPTNPQRLRAAAS 465 + ADL++ TAG + S L ++ V++ GR+ V+R L + GDVY +GD+A + G++ AQ A QQ+DY+ +NIWA ++KPL +R+ LGEM+ G LDGSV LG RV L G A +ARR+ Y +R PT QRLRAA S Sbjct: 345 LPADLVIMTAGVRASGLADMVNGRVERGRGGRLAVERTLAVKGL--------GDVYAIGDVADLGGVEGEGTAQAAFQQADYLVWNIWASYNDKKPLAYRYTKLGEMLTFGPLDGSVAALGDRVTLGGPLASIARRSAYIIRQPTPRQRLRAALS 491
BLAST of mRNA_L-elsbetiae_contig9719.18689.1 vs. uniprot
Match: A0A2W7D8E6_9CYAN (FAD-dependent oxidoreductase n=1 Tax=Snowella sp. TaxID=2164131 RepID=A0A2W7D8E6_9CYAN) HSP 1 Score: 110 bits (275), Expect = 8.590e-24 Identity = 64/148 (43.24%), Postives = 88/148 (59.46%), Query Frame = 1 Query: 1 EEIKADLLVWTAGSQPSSLVQSLDVQKDSRGRVEVDRRLRLVDAAAAPAGHGGDVYCLGDIAAVE---GLDLGCNAQVALQQSDYVAYNIWAGTENRKPLDFRFLNLGEMMNLGGLDGSVTTLGGRVKLTGKAAGLARRAVYAVRMPT 435 + I D+++WT G+ S L++ L + D G +E + L+++D DVY LGD+AA E G L AQVA QQSDY A+NIWAG NR PL FR+ LGEM+ LG + ++ LG +KL G A +ARR +Y R+PT Sbjct: 238 DTIPVDIVLWTVGNDVSELIRDLPLPHDKNGLLETNHFLQVIDHP--------DVYALGDVAACEDATGQHLPATAQVAFQQSDYCAWNIWAGETNRPPLPFRYQALGEMLTLGIDNATINGLG--IKLNGTPAAIARRLIYLYRLPT 375
BLAST of mRNA_L-elsbetiae_contig9719.18689.1 vs. uniprot
Match: A0A7S0JEC2_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JEC2_9EUKA) HSP 1 Score: 107 bits (266), Expect = 2.410e-22 Identity = 71/170 (41.76%), Postives = 97/170 (57.06%), Query Frame = 1 Query: 7 IKADLLVWTAGSQPSSLVQSLDVQKDSRGRVEVDRRLRLVDAAAAPAGHGGDVYCLGDIAAV---EGLDLGCNAQVALQQSDYVAYNIWAGTENRKPLDFRFLNLGEMMNLGGLDGSVTTLGGRVKLTGKAAGLARRAVYAVRMPTNPQRLRAAASAAAGTAFSVTNAIL 507 + ADL+VWTAG++PSSL +L + D RGR+ D LR+ ++ +Y LGD+A + G AQ A+QQ+DY A+N+ A L FR+ +LGEM++LG GS+T LG + L G A L+RRAVYA RMPT Q R S A A V + +L Sbjct: 273 LDADLVVWTAGTKPSSLASALGLPLDERGRICTDATLRVNGCSS--------LYALGDVATLVDARGSRPPSTAQAAMQQADYAAWNVRAARLGGPTLAFRYADLGEMLSLGDGYGSLTALGA-INLQGPLASLSRRAVYAARMPTTKQAGRVGLSWAVDAAAGVASRLL 433
BLAST of mRNA_L-elsbetiae_contig9719.18689.1 vs. uniprot
Match: A0A482SY71_9ARCH (Pyr_redox_2 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SY71_9ARCH) HSP 1 Score: 102 bits (254), Expect = 2.440e-22 Identity = 65/163 (39.88%), Postives = 101/163 (61.96%), Query Frame = 1 Query: 7 IKADLLVWTAGSQPSSLVQSLDVQKDSRGRVEVDRRLRLVDAAAAPAGHGGDVYCLGDIAAVEGLD--LGCNAQVALQQSDYVAYNIW---AGTENRKPLDFRFLNLGEMMNLGGLDGSVTTLGGRVKLTGKAAGLARRAVYAVRMPTNPQRLRAAASAAAGT 480 + +DL+++TAG+ S L++ LD+ KD GR+ V+ RL++ + + V+ +GD + L AQVALQQS +A N++ +G E + +F+++ LGEM++LG D ++TTLGG + L G A L RRAVYAVRMPT Q ++A +A+A T Sbjct: 34 LPSDLVLFTAGTVQSELIKQLDLPKDKNGRIHVNSRLQVQN-------YEDSVFAIGDCCNIAEATQPLPATAQVALQQSGTLAKNLYVSLSGGEEKYMEEFKYIPLGEMLSLGDADATITTLGGLLGLKGPLAALGRRAVYAVRMPTPTQTVKALITASAVT 189 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9719.18689.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9719.18689.1 >prot_L-elsbetiae_contig9719.18689.1 ID=prot_L-elsbetiae_contig9719.18689.1|Name=mRNA_L-elsbetiae_contig9719.18689.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=79bp MMNLGGLDGSVTTLGGRVKLTGKAAGLARRAVYAVRMPTNPQRLRAAASAback to top mRNA from alignment at L-elsbetiae_contig9719:2826..7421- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9719.18689.1 ID=mRNA_L-elsbetiae_contig9719.18689.1|Name=mRNA_L-elsbetiae_contig9719.18689.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4596bp|location=Sequence derived from alignment at L-elsbetiae_contig9719:2826..7421- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9719:2826..7421- >mRNA_L-elsbetiae_contig9719.18689.1 ID=mRNA_L-elsbetiae_contig9719.18689.1|Name=mRNA_L-elsbetiae_contig9719.18689.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=474bp|location=Sequence derived from alignment at L-elsbetiae_contig9719:2826..7421- (Laminarionema elsbetiae ELsaHSoW15)back to top |