mRNA_L-elsbetiae_contig9711.18684.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9711.18684.1 vs. uniprot
Match: D8LAT3_ECTSI (Bile Acid:Na+ symporter family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAT3_ECTSI) HSP 1 Score: 286 bits (733), Expect = 4.940e-94 Identity = 147/204 (72.06%), Postives = 173/204 (84.80%), Query Frame = 1 Query: 16 SYDKAKASVAKATRNFAEVQTIGAKEVLQLRQEGKRVLLVDVRTEEEMGVSMLRGAVTREEFESSNLGEPVRTGGKFQESSSDGEQAWDVVVPYCTVGFRSGQYAQKLVDLGYPSVKNSEGVVLWTHEIGRGLVAPDAENGASDVGPGSG--DDAGVEVKRVHVFGSPWDHASEEFETVKFTLIGWLCSIVKSAFFKIFGKKKT 621 SY+KA+ASV KAT +FA+VQTI AK+VL+L QEGK+VLLVDVRTE+EM VSMLRGA+TREEFE+S+LGE RTG KF+E S +GE+AW VV PYCTVGFRSGQYA+KLVDLGYPSV+NSEGVVLWTH++G GLVA A+ S PGSG + +GVEVKR+HVFGSPWDHAS++FET+KFT GW S VKSAF K+F KKKT Sbjct: 30 SYEKARASVEKATGHFADVQTISAKDVLRLEQEGKKVLLVDVRTEDEMKVSMLRGALTREEFENSSLGEAARTGKKFRERSGEGEEAWGVVAPYCTVGFRSGQYAKKLVDLGYPSVRNSEGVVLWTHDVGNGLVARAADEVESGGSPGSGPRNGSGVEVKRLHVFGSPWDHASDDFETIKFTATGWFGSTVKSAFSKMFKKKKT 233
BLAST of mRNA_L-elsbetiae_contig9711.18684.1 vs. uniprot
Match: A0A836CAM6_9STRA (Bile Acid:Na+ symporter family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAM6_9STRA) HSP 1 Score: 137 bits (346), Expect = 2.880e-36 Identity = 81/197 (41.12%), Postives = 110/197 (55.84%), Query Frame = 1 Query: 19 YDKAKASVAKATRNFAEVQTIGAKEVLQLRQEGKRVLLVDVRTEEEMGVSMLRGAVTREEFESSNLGEPVRTGGKFQESSSDGEQAWDVVVPYCTVGFRSGQYAQKLVDLGYPSVKNSEGVVLWTHEIGRGLVAPDAENGASDVGPGSGDDAGVEVKRVHVFGSPWDHASEEFETVKFTLIGWLCSIVKSAFFKIFG 609 Y KA+ S T FA++ T+ A EVL+LR G VLLVDVR EE VSM+ GA++ +EFESS+ ++ A VVPYCT+G+RSG YA+KL LGY V+N EG+V+WTH+IG GLV D G E K VH +G PWD + ++ +V F + W+ S + A+ + G Sbjct: 5 YTKARESCMHYTGEFADIATLSALEVLRLRTNGTPVLLVDVRLPEEQDVSMIEGAISLDEFESSHR----------RDQYGPAALANTTVVPYCTIGYRSGAYARKLKTLGYRHVRNGEGIVMWTHDIGSGLVDRD----------------GRETKYVHTYGPPWDLVASDYHSVHFGVWNWIQSHSRGAWRWVTG 175
BLAST of mRNA_L-elsbetiae_contig9711.18684.1 vs. uniprot
Match: A0A813CHA3_9DINO (Hypothetical protein (Fragment) n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813CHA3_9DINO) HSP 1 Score: 106 bits (264), Expect = 1.460e-23 Identity = 73/169 (43.20%), Postives = 101/169 (59.76%), Query Frame = 1 Query: 91 EVLQLRQEGKRVLLVDVRTEEEMGVSMLRGAVTREEFESSNLGEPVRTGGKFQESSSDGEQAWD---VVVPYCTVGFRSGQYAQKLVDL-GYPSVKNSEGVVLWTHEIGRGLVAPDAENGASDVGPGSGDDAGVE-------VKRVHVFGSPWDHASEEFETVKFTLIG 564 E+ Q ++G+ V+LVDVR +EEM VSM+ G+VT+E FES L G +A D +VVPYCTVG+RSG YA++L+D G +V+N EGV++WT + G GLV P + + VG + +DAG V RVHV+G PWD A+E + T F+ G Sbjct: 34 ELRQRLEKGEDVVLVDVRCKEEMDVSMIPGSVTKEHFESQLL---------------PGLRAADPQPLVVPYCTVGYRSGVYAKELMDKHGLQNVRNGEGVIMWTFD-GSGLVRPASGVAGTVVGKAA-EDAGEALTSAWQPVTRVHVYGKPWDMAAEGYTTEFFSQTG 185
BLAST of mRNA_L-elsbetiae_contig9711.18684.1 vs. uniprot
Match: A0A7S0DLF0_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DLF0_9EUKA) HSP 1 Score: 101 bits (252), Expect = 2.040e-22 Identity = 63/163 (38.65%), Postives = 91/163 (55.83%), Query Frame = 1 Query: 76 TIGAKEVLQLRQEGKRVLLVDVRTEEEMGVSMLRGAVTREEFESSNLGEPVRTGGKFQESSSDGEQAWDVVVPYCTVGFRSGQYAQKLVDLGYPSVKNSEGVVLWTHEIGRGLVAPDAENGASDVGPGSGDDAGVEVKRVHVFGSPWDHASEEFETVKFTLIG 564 TI +KE L + G+ VL VD+RT+EE VS + G++ E+F + +L T +V YCT+GFRSG +AQKL + G V NSEG+VLWTH+ L+ + +NG + K+VHV+G+ WD AS ++ETVKF+ +G Sbjct: 44 TISSKEANSLVKNGENVLFVDIRTKEERDVSFIPGSIDEEKFWTMDLKALKNTH----------------IVSYCTIGFRSGLFAQKLKNKGLEHVYNSEGIVLWTHDSEVKLIHKN-KNGKEEP-----------AKKVHVYGASWDLASNKYETVKFSGLG 178
BLAST of mRNA_L-elsbetiae_contig9711.18684.1 vs. uniprot
Match: A0A812UW94_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812UW94_9DINO) HSP 1 Score: 104 bits (260), Expect = 2.290e-21 Identity = 73/169 (43.20%), Postives = 100/169 (59.17%), Query Frame = 1 Query: 91 EVLQLRQEGKRVLLVDVRTEEEMGVSMLRGAVTREEFESSNLGEPVRTGGKFQESSSDGEQAWD---VVVPYCTVGFRSGQYAQKLVDL-GYPSVKNSEGVVLWTHEIGRGLVAPDAENGASDVGPGSGDDAGVE-------VKRVHVFGSPWDHASEEFETVKFTLIG 564 E+ Q ++G+ V+LVDVR +EEM VSM+ G+VT+E FES L G +A D +VVPYCTVG+RSG YA++L++ G +V+N EGV++WT + G GLV P + VG S +DAG V RVHV+G PWD A+E + T F+ G Sbjct: 616 ELRQRLEKGENVVLVDVRCKEEMDVSMIPGSVTKEHFESQLL---------------PGLRAADPQPLVVPYCTVGYRSGVYAKELMNKHGLQNVRNGEGVIMWTFD-GSGLVRPAPGAPGTVVGK-SAEDAGEAPSTAWEPVTRVHVYGKPWDMAAEGYTTEFFSQSG 767
BLAST of mRNA_L-elsbetiae_contig9711.18684.1 vs. uniprot
Match: A0A813HB18_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HB18_POLGL) HSP 1 Score: 101 bits (251), Expect = 2.690e-20 Identity = 71/183 (38.80%), Postives = 100/183 (54.64%), Query Frame = 1 Query: 115 GKRVLLVDVRTEEEMGVSMLRGAVTREEFESSNLGEPVRTGGKFQESSSDGEQAWD-----VVVPYCTVGFRSGQYAQKLV-DLGYPSVKNSEGVVLWTHEIGRGLVAPDAE--------------NGASDVGPGSGDDAGV-------------EVKRVHVFGSPWDHASEEFETVKFTLIG 564 G+ ++LVDVRT EEM VSM+ GAV ++ FE+ L P G+ Q+ +QA D ++VPYCTVG+RSG Y ++LV + G+ +V+N EGV++WT + G LV P G+ P SG+ AG+ V VHV+G PWD A+E F T+ FT +G Sbjct: 238 GEDIILVDVRTPEEMQVSMIPGAVAKDLFEAEIL--PKLLEGRQQDGQ---QQAIDSLSSPLIVPYCTVGYRSGLYCRELVNEHGFSNVRNGEGVIMWTFD-GSVLVKPLPGAPSRAPALPPQVYGKGSEGAQPSSGEAAGLVSGGGTKTATAWQSVSEVHVYGKPWDMAAEGFTTIYFTPVG 414
BLAST of mRNA_L-elsbetiae_contig9711.18684.1 vs. uniprot
Match: R1D8G3_EMIHU (Rhodanese domain-containing protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D8G3_EMIHU) HSP 1 Score: 91.7 bits (226), Expect = 8.600e-19 Identity = 65/202 (32.18%), Postives = 99/202 (49.01%), Query Frame = 1 Query: 10 TTSYDKAKASVAKATRNFAEVQTIGAKEVLQLRQEGKRVLLVDVRTEEEMGVSMLRGAVTREEFESSNLGEPVRTGGKFQESSSDGEQAWDVVVPYCTVGFRSGQYAQKLVDLGYP-------SVKNSEGVVLWTHEIGRGLVAPDAENGASDVGPGSGDDAGVEVKRVHVFGSPWDHASEEFETVKFTLIGWLCSIVKSAF 594 T+ D A A + T FA + A +V+ ++Q G+ V+L+DVR+ E VS L GA+ + F + EP R A V+VP+CT+GFRSG Y + + G V+N EGVVLW+H++G + G V+ +HV+GS WD A++ F+TV F G L + ++ A+ Sbjct: 3 TSRRDAALAELRARTAGFAGLPLASASDVISMQQGGRDVILIDVRSPPERAVSTLPGALDQHSFAALAREEPERV-------------AAAVLVPFCTIGFRSGLYCEWIRGGGLGMAASSELDVRNGEGVVLWSHDVGTFVQD------------------GAPVRSLHVYGSAWDLAADGFDTVTFGPAGHLSAALRVAW 173
BLAST of mRNA_L-elsbetiae_contig9711.18684.1 vs. uniprot
Match: A0A812J6E8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812J6E8_9DINO) HSP 1 Score: 90.1 bits (222), Expect = 1.250e-18 Identity = 63/148 (42.57%), Postives = 85/148 (57.43%), Query Frame = 1 Query: 154 EMGVSMLRGAVTREEFESSNLGEPVRTGGKFQESSSDGEQAWD---VVVPYCTVGFRSGQYAQKLVDL-GYPSVKNSEGVVLWTHEIGRGLVAPDAENGASDVGPGSGDDAGVE-------VKRVHVFGSPWDHASEEFETVKFTLIG 564 EM VSM+ G+VT+E FES L G +A D +VVPYCTVG+RSG YA++L+D G +V+N EGV++WT + G GLV P + + VG + +DAG V RVHV+G PWD A+E + T F+ G Sbjct: 1 EMEVSMIPGSVTKEHFESQLL---------------PGLRAADPQPLVVPYCTVGYRSGVYAKELMDKHGLQNVRNGEGVIMWTFD-GSGLVRPASGVAGTVVGKAA-EDAGEALTSAWQPVTRVHVYGKPWDMAAEGYTTEFFSQTG 131
BLAST of mRNA_L-elsbetiae_contig9711.18684.1 vs. uniprot
Match: A0A0G4FZW3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FZW3_VITBC) HSP 1 Score: 90.9 bits (224), Expect = 1.090e-16 Identity = 66/197 (33.50%), Postives = 94/197 (47.72%), Query Frame = 1 Query: 55 RNFAEVQTIGAKEVLQLRQEGKRVLLVDVRTEEEMGVSMLRGAVTREEFESSNLGEPVRTGGKFQESSSDGEQAWDVVVPYCTVGFRSGQYAQKLVDLGYPSVKNSEGVVLWT-------HEIGRGLVAPDAENGA--------SDVGPGSGDDAGVEVK------RVHVFGSPWDHASEEFETVKFTLIGWLCSIV 582 R F V + E ++L+ G++VL+VD RT EEM SM+ GA+T E+ E E+ QA ++VPYC+VG+RSG A++L GY +V+N +G+VLW H+ P E A S P D + + ++ RVHVFGS W H ++ V F L L IV Sbjct: 20 RKFPRVPPLSVDEAVRLQSAGEKVLMVDCRTAEEMSCSMVDGAITLEQLE---------------EADEADLQAATMIVPYCSVGYRSGIVAERLRRQGYENVRNGDGIVLWAWHDWQKQHQQQSQPADPATEPSAPSPRLVVPSRQPPEVADSSPLLLEKSGQPTRVHVFGSMWSHLPPGYQAVTFPLCRQLAEIV 201
BLAST of mRNA_L-elsbetiae_contig9711.18684.1 vs. uniprot
Match: A0A6H5KXH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXH1_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 2.090e-16 Identity = 44/60 (73.33%), Postives = 55/60 (91.67%), Query Frame = 1 Query: 16 SYDKAKASVAKATRNFAEVQTIGAKEVLQLRQEGKRVLLVDVRTEEEMGVSMLRGAVTRE 195 SY+KA+ASV KAT +FA++QTI AK+VL+L QEGK+VLLVDVRTE+EM VSMLRGA+TR+ Sbjct: 7 SYEKARASVEKATGHFADIQTISAKDVLRLEQEGKKVLLVDVRTEDEMKVSMLRGALTRQ 66 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9711.18684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9711.18684.1 >prot_L-elsbetiae_contig9711.18684.1 ID=prot_L-elsbetiae_contig9711.18684.1|Name=mRNA_L-elsbetiae_contig9711.18684.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=157bp MGVSMLRGAVTREEFESSNLGEPVRTGGKFQESSSDGEQAWDVVVPYCTVback to top mRNA from alignment at L-elsbetiae_contig9711:1697..7565+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9711.18684.1 ID=mRNA_L-elsbetiae_contig9711.18684.1|Name=mRNA_L-elsbetiae_contig9711.18684.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5869bp|location=Sequence derived from alignment at L-elsbetiae_contig9711:1697..7565+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9711:1697..7565+ >mRNA_L-elsbetiae_contig9711.18684.1 ID=mRNA_L-elsbetiae_contig9711.18684.1|Name=mRNA_L-elsbetiae_contig9711.18684.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=942bp|location=Sequence derived from alignment at L-elsbetiae_contig9711:1697..7565+ (Laminarionema elsbetiae ELsaHSoW15)back to top |