mRNA_L-elsbetiae_contig9700.18675.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9700.18675.1
Unique NamemRNA_L-elsbetiae_contig9700.18675.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Match: A0A6H5KKK8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK8_9PHAE)

HSP 1 Score: 369 bits (946), Expect = 3.050e-111
Identity = 270/443 (60.95%), Postives = 297/443 (67.04%), Query Frame = 1
Query:    1 GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIVDGVLGSGGGA--------SSAYVMQDNVHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTVGDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAVRGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYFASIGLSPPPSPTSSAASAASGQNPADFLLSLLAASS-----------ASDRSVTGEEGAPLLLDDPVDVGVENVGINSGRPRTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGRPY----AVTPAELGRAYYESAASVGIREGVEREAAEAAGAHRXXXXXXXXXXXXXGSRSRKRKDYSTVWLSAVLTQRQV 1260
            GPSGSGKTTLLDLLGGRKTRS GRQEGDI+VDGV G  GG          SAYVMQDNVHH +LTVRQTL FAAKLRMS+T TA DR++RVAAMVTMLGL GVL+TTVGDES RGISGGEAKRLS+AVEA+DLPGLLLLDE TSGLDATTALEVLTAVRGLADLGRTV++SLHQPSGEMFEL D CLLLARGGYPAYFG+ANRAMAYFAS+GL+PPPS  S      + QNPADFLLSLLA SS           ASD     + G+ L           + G++     T AXXXXXXXXXXXXXXXXXXXX                                     XXXXXXXXXX     Y     VTPAELGRA+ +S+ SVGIR+  EREAAEA    R             G+    R   S +WLSAVLT R++
Sbjct: 1103 GPSGSGKTTLLDLLGGRKTRSVGRQEGDIVVDGVFGREGGVVSRGSGVGGSAYVMQDNVHHASLTVRQTLQFAAKLRMSNTVTAEDREKRVAAMVTMLGLEGVLETTVGDESNRGISGGEAKRLSVAVEAIDLPGLLLLDEPTSGLDATTALEVLTAVRGLADLGRTVILSLHQPSGEMFELLDVCLLLARGGYPAYFGRANRAMAYFASVGLTPPPSSAS-----VTDQNPADFLLSLLAQSSPSSNNGTLTATASDDGDQHDRGSSLPTSSSSSPSRFSAGVDIAP--TMAXXXXXXXXXXXXXXXXXXXXGLSPLLDVDLGIGHVGVEVGQGLSTPSRRGGGFSGIGXXXXXXXXXXXXXXXYNGRRPVTPAELGRAFLQSSLSVGIRQEAEREAAEAGVRRRDAERMGLTVD---GAEEAGRGWRSMLWLSAVLTHREL 1535          
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Match: D8LSM1_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM1_ECTSI)

HSP 1 Score: 363 bits (933), Expect = 1.600e-110
Identity = 198/251 (78.88%), Postives = 213/251 (84.86%), Query Frame = 1
Query:    1 GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIVDGVLGSGGGA--------SSAYVMQDNVHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTVGDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAVRGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYFASIGLSPPPSPTSSAASAASGQNPADFLLSLLAASSASDRSVT 729
            GPSGSGKTTLLDLLGGRKTRS GRQEGDI+VDGV G  GG          SAYVMQDNVHH +LTVRQTL FAAKLRM +T TA DR++RVAAMVTMLGL GVL+TTVGDES RGISGGEAKRLS+AVEA+DLPGLLLLDE TSGLDATTALEVLTAVRGLADLGRTV++SLHQPSGEMFEL D CLLLARGGYPAYFG+ANRAMAYFAS+GL+PPPS  S      + QNPADFLLSLLA SS S  + T
Sbjct:  700 GPSGSGKTTLLDLLGGRKTRSVGRQEGDIVVDGVFGREGGVVSRGSGVGGSAYVMQDNVHHASLTVRQTLQFAAKLRMCNTVTAEDREKRVAAMVTMLGLEGVLETTVGDESNRGISGGEAKRLSVAVEAIDLPGLLLLDEPTSGLDATTALEVLTAVRGLADLGRTVILSLHQPSGEMFELLDVCLLLARGGYPAYFGRANRAMAYFASVGLTPPPSSAS-----VTDQNPADFLLSLLAQSSPSSNNGT 945          
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Match: A0A6J0M9T5_RAPSA (ABC transporter G family member 22-like n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0M9T5_RAPSA)

HSP 1 Score: 178 bits (451), Expect = 1.040e-46
Identity = 120/280 (42.86%), Postives = 160/280 (57.14%), Query Frame = 1
Query:    1 GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIVDGVLGSGGGASSAY-------VMQDNVHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTVGDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAVRGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYFASIGLSPPPSPTSSAASAASGQNPADFLLSLLAASSASDRSVTGEEGAPLLLDDPVDVGVENVGINSGRPRTA 819
            GPSGSGKTTLL LLGGR ++SA        + G +       S Y       V QD+V    LTV++TL++AA+LR+  T T   +++R   ++  LGL    DT +G    RG+SGGE KR+SI  E +  P LLLLDE TSGLD+TTAL  +  +  +A+ G+TV+ ++HQPS  +F  FD  +LL RG    YFGK++ A+ YF+SIG SP               NPA+FLL L A  + SD SV  E      LDD V VG+ N    +G+P  A
Sbjct:    2 GPSGSGKTTLLSLLGGRISQSA--------IGGSITYNNKPYSKYLKSKIGFVTQDDVLFPHLTVKETLTYAARLRLPKTLTREQKEQRAIGVIQELGLERCQDTMIGGAFVRGVSGGERKRVSIGNEIIINPSLLLLDEPTSGLDSTTALRTIQMLHDIAEAGKTVITTIHQPSSRLFHRFDKLILLGRGNL-LYFGKSSEALDYFSSIGCSP-----------LIAMNPAEFLLDL-ANGNISDISVPSE------LDDRVQVGISNRESQTGKPSPA 254          
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Match: W7TLH8_9STRA (Abc transporter g family member 29 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLH8_9STRA)

HSP 1 Score: 181 bits (458), Expect = 4.310e-46
Identity = 107/230 (46.52%), Postives = 147/230 (63.91%), Query Frame = 1
Query:    1 GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIVDGVLGSGGGASSAYVMQDNVHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTVGDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAVRGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYFASIGLSPPPSPTSSAASAASGQNPADFLLS 690
            G SG+GKTTLLD+L GRKT  AG  EG++  +G  G       +YV QDNVH G  TVR+TL FAA LR+        R++ V  ++ MLGL  V D  VGD  ++GISGG+A+RL+I VE ++LPG++ LDE T+GLD+  + EV+ AVR LA+  RTV  ++HQPS E+F LFD  +L+A+G    YFG  + A+ YF+S  L           + + G NPA+F++S
Sbjct:  695 GGSGAGKTTLLDVLAGRKT--AGLIEGEVFFNGKAGMPSPKLCSYVTQDNVHIGCFTVRETLHFAALLRIKEGVRPAQREKMVDDVLGMLGLDSVADVMVGDSLRKGISGGQARRLTIGVEIINLPGMIFLDEPTTGLDSNISYEVMAAVRNLANQNRTVCCTIHQPSIEVFALFDKLILMAKGEQ-VYFGATHEAVKYFSSPALD---------FAFSKGVNPAEFVMS 912          
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Match: A0A5K0VPC4_9MAGN (ABC transporter domain-containing protein (Fragment) n=1 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K0VPC4_9MAGN)

HSP 1 Score: 170 bits (430), Expect = 4.420e-46
Identity = 104/232 (44.83%), Postives = 146/232 (62.93%), Query Frame = 1
Query:    1 GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIVDGV-LGSGGGASSAYVMQDNVHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTVGDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAVRGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYFASIGLSPPPSPTSSAASAASGQNPADFLLSL 693
            GPSGSGKTTLL  LGGR     GR  G +  +G+   +    +  +V QD+V H  LTV +TL F A+LR+ +  TA+++  +  A++  LGL G  ++ +G    RG+SGGE KR+S+  E +  P LLLLDE TSGLD+TTA  +++ + GLA  GRT+V+++HQPS  ++ LF+  LLL+  G+P YFG+A+ A+ YF+SIG SP               NPADFLL L
Sbjct:   80 GPSGSGKTTLLTALGGRL---GGRLAGSVTYNGIPFCNSVKRNMGFVTQDDVLHPHLTVTETLVFTAQLRLPNIMTAQEKASQAEAVIAELGLAGCRNSVIGGNFLRGVSGGERKRVSVGQEMLINPSLLLLDEPTSGLDSTTAQRLVSTLAGLAKGGRTIVMTIHQPSSRLYYLFNKVLLLS-DGHPFYFGQASGALDYFSSIGHSP-----------TLAMNPADFLLDL 296          
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Match: A0A2U1LD00_ARTAN (AAA+ ATPase domain-containing protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1LD00_ARTAN)

HSP 1 Score: 174 bits (440), Expect = 2.910e-45
Identity = 116/274 (42.34%), Postives = 162/274 (59.12%), Query Frame = 1
Query:    1 GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIV-DGVLGSGGGASSAYVMQDNVHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTVGDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAVRGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYFASIGLSPPPSPTSSAASAASGQNPADFLLSLLAASSASDRSVTGEEGAPLLLDDPVDVGVENVGINSGRPRTA 819
            GPSGSGKTTLL LLGGR T +   Q G I   D        +   +V QD++    LTV++T+++AA LR+  T T ++++ + A ++  LGL    DT +G+   RG+SGGE KR+SI  E +  P LL LDE TSGLD+TTAL ++  ++ +A+ G+TV+ ++HQPS  +F  FD  +LL +G    YFGKA+ AM YF+SIG SP  S            NPA+FLL L A  + +D SV  E      L+D VD+G       +G+P  A
Sbjct:  187 GPSGSGKTTLLSLLGGRVTDA--NQGGSITYNDQPYSKFLKSRIGFVTQDDILFPHLTVKETITYAALLRLPKTLTKQEKENQAADIIRELGLERCQDTMIGNSFVRGVSGGERKRVSIGNEIIINPSLLFLDEPTSGLDSTTALRIIELLQDIAETGKTVITTIHQPSSRLFHKFDKLILLGKGSL-LYFGKASEAMTYFSSIGCSPLIS-----------MNPAEFLLDL-ANGNLNDVSVPHE------LEDKVDLGNSGRETRNGKPSPA 439          
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Match: A0A8E6YI21_SALMI (ABC transporter n=1 Tax=Salvia miltiorrhiza TaxID=226208 RepID=A0A8E6YI21_SALMI)

HSP 1 Score: 174 bits (441), Expect = 4.050e-45
Identity = 116/274 (42.34%), Postives = 155/274 (56.57%), Query Frame = 1
Query:    1 GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIV-DGVLGSGGGASSAYVMQDNVHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTVGDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAVRGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYFASIGLSPPPSPTSSAASAASGQNPADFLLSLLAASSASDRSVTGEEGAPLLLDDPVDVGVENVGINSGRPRTA 819
            GPSGSGKT+LL LLGGR T  A    G I   D            +V QD+V    LTVR+TL++AA+LR+  T T  ++D+R + ++  LGL    DT +G    RG+SGGE KR+ I  E +  P LL LDE TSGLD+TTAL ++  +  +A+ G+TVV ++HQPS  +F  FD  +LL +G    YFGK + AM YF+SIG SP               NPA+F+L L A  + +D SV  E      L+D V +G       SG+P  A
Sbjct:   27 GPSGSGKTSLLSLLGGRVTEPA--HGGSITYNDQAYSKSLKCRIGFVTQDDVLFPHLTVRETLTYAARLRLPKTLTKEEKDQRASDVIYELGLESCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVDTLHDIAEAGKTVVTTIHQPSSRLFLKFDKLILLGKGSL-LYFGKVSEAMVYFSSIGCSP-----------LIAMNPAEFMLDL-ANGNVTDISVPSE------LEDKVQMGNSTTETKSGKPAPA 279          
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Match: A0A4D9C2V9_SALSN (ABC transporter domain-containing protein n=3 Tax=Salvia TaxID=21880 RepID=A0A4D9C2V9_SALSN)

HSP 1 Score: 174 bits (442), Expect = 5.100e-45
Identity = 115/274 (41.97%), Postives = 153/274 (55.84%), Query Frame = 1
Query:    1 GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIV-DGVLGSGGGASSAYVMQDNVHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTVGDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAVRGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYFASIGLSPPPSPTSSAASAASGQNPADFLLSLLAASSASDRSVTGEEGAPLLLDDPVDVGVENVGINSGRPRTA 819
            GPSGSGKT+LL LLGGR         G I   D            +V QD+V    LTVR+TL++AA+LR+  T T  ++D+R + ++  LGL    DT +G    RG+SGGE KR+ I  E +  P LL LDE TSGLD+TTAL ++  +  +A+ G+TVV ++HQPS  +F  FD  +LL +G    YFGK + AM YF+SIG SP               NPA+F+L L A  + +D SV  E      LDD V +G       SG+P  A
Sbjct:   66 GPSGSGKTSLLSLLGGRGRVREPAHGGSITYNDQPYSKSLKCRIGFVTQDDVLFPHLTVRETLTYAARLRLPKTLTKEEKDKRASDVIYELGLESCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVDTLHDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSL-LYFGKVSEAMVYFSSIGCSP-----------LIAMNPAEFMLDL-ANGNVTDISVPSE------LDDRVQIGDSTTETKSGKPAPA 320          
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Match: A0A7N1A6Y3_KALFE (ABC transporter domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N1A6Y3_KALFE)

HSP 1 Score: 173 bits (439), Expect = 1.250e-44
Identity = 113/274 (41.24%), Postives = 162/274 (59.12%), Query Frame = 1
Query:    1 GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIVDGVLGSGGGASSAYVMQDNVHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTVGDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAVRGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYFASIGLSPPPSPTSSAASAASGQNPADFLLSLLAASSASDRSVTGEEGAPLLLDDPVDVGVENVGINSGRPRTAA 822
            GPSGSGKTTLL+LLGGR   S G++      D        +   +V QD+V    LTV++TL+++A+LR+S T T +++++R + ++  LGL    DT +G    RG+SGGE KR+ I  E +  P LL LDE TSGLD+TTAL ++  ++ +A+ G+TV+ ++HQPS  +F  FD  +LL +G    YFG+A+ A+ YFASIG SP               NPA+FLL L A  + SD SV  E      L++ V +G     +  G+P  AA
Sbjct:  185 GPSGSGKTTLLNLLGGR-LNSQGQRGSVTYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYSARLRLSKTMTKQEKEKRASDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEILINPSLLFLDEPTSGLDSTTALRIVQMLQDIAESGKTVITTIHQPSSRLFHKFDKLILLGKGSL-LYFGRASEALEYFASIGCSP-----------LIAMNPAEFLLDL-ANGNVSDVSVPSE------LEEKVQMGSSERHMKDGKPSPAA 438          
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Match: A0A2U1LCX9_ARTAN (AAA+ ATPase domain-containing protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1LCX9_ARTAN)

HSP 1 Score: 174 bits (440), Expect = 3.080e-44
Identity = 116/274 (42.34%), Postives = 162/274 (59.12%), Query Frame = 1
Query:    1 GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIV-DGVLGSGGGASSAYVMQDNVHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTVGDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAVRGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYFASIGLSPPPSPTSSAASAASGQNPADFLLSLLAASSASDRSVTGEEGAPLLLDDPVDVGVENVGINSGRPRTA 819
            GPSGSGKTTLL LLGGR T +   Q G I   D        +   +V QD++    LTV++T+++AA LR+  T T ++++ + A ++  LGL    DT +G+   RG+SGGE KR+SI  E +  P LL LDE TSGLD+TTAL ++  ++ +A+ G+TV+ ++HQPS  +F  FD  +LL +G    YFGKA+ AM YF+SIG SP  S            NPA+FLL L A  + +D SV  E      L+D VD+G       +G+P  A
Sbjct:  187 GPSGSGKTTLLSLLGGRVTDA--NQGGSITYNDQPYSKFLKSRIGFVTQDDILFPHLTVKETITYAALLRLPKTLTKQEKENQAADIIRELGLERCQDTMIGNSFVRGVSGGERKRVSIGNEIIINPSLLFLDEPTSGLDSTTALRIIELLQDIAETGKTVITTIHQPSSRLFHKFDKLILLGKGSL-LYFGKASEAMTYFSSIGCSPLIS-----------MNPAEFLLDL-ANGNLNDVSVPHE------LEDKVDLGNSGRETRNGKPSPA 439          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKK8_9PHAE3.050e-11160.95ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LSM1_ECTSI1.600e-11078.88ABC transporter domain-containing protein n=1 Tax=... [more]
A0A6J0M9T5_RAPSA1.040e-4642.86ABC transporter G family member 22-like n=1 Tax=Ra... [more]
W7TLH8_9STRA4.310e-4646.52Abc transporter g family member 29 n=2 Tax=Monodop... [more]
A0A5K0VPC4_9MAGN4.420e-4644.83ABC transporter domain-containing protein (Fragmen... [more]
A0A2U1LD00_ARTAN2.910e-4542.34AAA+ ATPase domain-containing protein n=1 Tax=Arte... [more]
A0A8E6YI21_SALMI4.050e-4542.34ABC transporter n=1 Tax=Salvia miltiorrhiza TaxID=... [more]
A0A4D9C2V9_SALSN5.100e-4541.97ABC transporter domain-containing protein n=3 Tax=... [more]
A0A7N1A6Y3_KALFE1.250e-4441.24ABC transporter domain-containing protein n=1 Tax=... [more]
A0A2U1LCX9_ARTAN3.080e-4442.34AAA+ ATPase domain-containing protein n=1 Tax=Arte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9700contigL-elsbetiae_contig9700:993..5733 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score367.5
Seed ortholog evalue8.5e-99
Seed eggNOG ortholog2880.D8LSM1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1131@1,KOG0061@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1260
Cds size1260
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9700.18675.1prot_L-elsbetiae_contig9700.18675.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9700 993..5733 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817034.7291343-CDS-L-elsbetiae_contig9700:992..11361622817034.7291343-CDS-L-elsbetiae_contig9700:992..1136Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9700 993..1136 +
1691683998.0724204-CDS-L-elsbetiae_contig9700:992..11361691683998.0724204-CDS-L-elsbetiae_contig9700:992..1136Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9700 993..1136 +
1622817034.74073-CDS-L-elsbetiae_contig9700:2829..29651622817034.74073-CDS-L-elsbetiae_contig9700:2829..2965Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9700 2830..2965 +
1691683998.086937-CDS-L-elsbetiae_contig9700:2829..29651691683998.086937-CDS-L-elsbetiae_contig9700:2829..2965Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9700 2830..2965 +
1622817034.752271-CDS-L-elsbetiae_contig9700:3242..33701622817034.752271-CDS-L-elsbetiae_contig9700:3242..3370Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9700 3243..3370 +
1691683998.0973802-CDS-L-elsbetiae_contig9700:3242..33701691683998.0973802-CDS-L-elsbetiae_contig9700:3242..3370Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9700 3243..3370 +
1622817034.7665155-CDS-L-elsbetiae_contig9700:3751..39271622817034.7665155-CDS-L-elsbetiae_contig9700:3751..3927Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9700 3752..3927 +
1691683998.107761-CDS-L-elsbetiae_contig9700:3751..39271691683998.107761-CDS-L-elsbetiae_contig9700:3751..3927Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9700 3752..3927 +
1622817034.7780116-CDS-L-elsbetiae_contig9700:5057..57331622817034.7780116-CDS-L-elsbetiae_contig9700:5057..5733Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9700 5058..5733 +
1691683998.1198516-CDS-L-elsbetiae_contig9700:5057..57331691683998.1198516-CDS-L-elsbetiae_contig9700:5057..5733Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9700 5058..5733 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9700.18675.1

>prot_L-elsbetiae_contig9700.18675.1 ID=prot_L-elsbetiae_contig9700.18675.1|Name=mRNA_L-elsbetiae_contig9700.18675.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=420bp
GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIVDGVLGSGGGASSAYVMQDN
VHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTV
GDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAV
RGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYF
ASIGLSPPPSPTSSAASAASGQNPADFLLSLLAASSASDRSVTGEEGAPL
LLDDPVDVGVENVGINSGRPRTAAAAVAAAAAAADAAAAAAAATGRSFSA
GAAAAGSGAEEEGGGRDESHRGRSRSGSSGSNSSSSSSSSGGSGRPYAVT
PAELGRAYYESAASVGIREGVEREAAEAAGAHRRGGGGGRRWRRRRGSRS
RKRKDYSTVWLSAVLTQRQV
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mRNA from alignment at L-elsbetiae_contig9700:993..5733+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9700.18675.1 ID=mRNA_L-elsbetiae_contig9700.18675.1|Name=mRNA_L-elsbetiae_contig9700.18675.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4741bp|location=Sequence derived from alignment at L-elsbetiae_contig9700:993..5733+ (Laminarionema elsbetiae ELsaHSoW15)
GGTCCCTCCGGGTCGGGAAAGACGACGCTGCTTGACCTTCTCGGCGGGCG CAAGACTCGATCGGCCGGCAGGCAAGAGGGCGACATCATCGTCGACGGCG TGCTGGGATCGGGCGGCGGGGCGAGCAGCGCCTACGTGATGCAGGTGCGG GAGGGAGGGAGGGAGGGAGGGGATATGCACCCGCGCGGCGTGGCGTGGCG TAGTCGTGGTGTGGTCGTGGTGGCGGTGCGGCGGGTCGGGGGGGGGGGGG GGGGGACCAAAACACTGACGCGCTGGTCTCCTTTTTCTGTTGAGGTTGCG CATTTTCGGAAAGCATTTGCTGCTGTCGTTGGTGGTGGTGGTGGTGGTGC TGGTGGTGCTGTCATCGGTACCGCTGCCATTGGTGCTGGTGCTGGTGGTG GTGCTTTCAGTGGTGCTGTCATTGGTACGGCTGTCATTGGTGGTGCTGCC ATTGGTGGTGCTGGTGCTGGTGCTGGTGCTGGTGCTATCAGTGGTGCTGT CATTGGTACTGCTGCCATTGATGGTGCCGGTGCTGGTGCTATCAGTGGTG CTGTCATTGGTGCTACTGCTGCTGCCATCGGGTACTACTGCTGCCTCCAT TGGTGCTGCTGCTGCTGCCATCAGTGCTGCTGTCATTTGGTGCTGCTGCC GTTGGTGCTACTGCCACTGCTGCTGCTGCTGCTGCTGCTTCCGTAGGTGC TGCTACCCTCTTGGCGCTGCTTTGCTTTTTGTGGTGCTGTCCTTGAAATG CACGGCGTTAATAGGCACGCCCCTAATTCTGCGGTCGGACCCCCGTCTGT GGCGATGTTTTGTTCCACTCTCGGCGCCCATGAGTGAGTTGGTTACCCGT GGGCAGGCAAGGCGCACACGCTTGGGGCAGATTTTGACGAAAGGAGCGCA TGTATCCTCATTCCCGAGCCTACGGCATTTTCTTGTGGGTTTCTGATCTC AGCGGTTGGCCCTCGACGTTTTGGGGGCACGCTCCGGAGGAATGTATGTA TTATGTATGTTGTCTTCACATTAAAAACCGTTCCGATCTCTCTATCCAGT ACCTCTCAATGTCCGTACTAATCTAACACTTGATGCGGTCAATTCCTGTG GTCACAGGCTAACTTATACCCAAGAAAAGGTACACGAAAAATAAAATGGG CCCGAAGGGCCAGCAAAGCAATAACAAAACAGATATCGAATCTGGAGCCC TCCGCTCCCCTCTACACGCTATGTGAGGTAAAAACAAAACTGGAACAGCC AACACCACTATCTTGGTACCCCAACAAAGCCGGGGAGTTCCGCGCCGGGT TCTCGCCGGCCAGGCCCGCACAGGTCTACATAGTCCTCCCCCCGATTATA CCGCCCACCAACAGGGGGTAGAAATAAAAATAAAAATTAAATAACATACC CTCGGACAGGACACGACGCAGGTCGAGAATACAAACAAGCAAATAAACAA CAAACACAACATAACCCCTGACAAAATAAGTCACTCCTCCGGTGGGTGCA GGCTGGTACAACAACGATGGGAGGGGGGAAATTATAAATTAGTCAAGGAT TGGTTCAGTCAGGAGCGTGCCGTGTTACTGCTTCCGCCTCCGCCCTCTTG AGTACGCTGCGCCCAGCTTCGCTCGTCTTCGGCCTCTTTCTCCTGCTGTT TGTAGTTAACGGATGGTTTATTTAATTCATGCATACAAGTATCAGCAATC TACGTCCAGTCTGTGAAAAAGTCGTTCCAGAGGGGCTACTGCTGTATGTA TAATGTATATTCTTTTTAATTTGTGTTGTTGCTGGTTGTTTTTTCTTTTT CTTTTTCGTCTTCGAACCTACGTATGTGACTGGGCAGGATAACGTGCACC ATGGCGCCCTCACGGTGCGGCAGACGCTTTCGTTCGCGGCAAAGCTCCGC ATGTCGAGCACAGCCACGGCGAGGGACAGGGACAGGCGGGTCGCCGCCAT GGTCACCATGCTCGGGCTGCGCGGTGGGTACTTGAGGGGGGCCCGTGATT GCAACAGTAGAGGAGAGCGATATACGGGGGGGAGGGGGGGGGGCGAGGTG GAGGGGTAACGGTCGAGAGCACCCCGCACCCGAAACGCAGATTTAGGTGT AAAGTACAGGAGTCGCTCTATTTTTTTTGTGGTGTAATTTTATTTTTGTG TGGGTGTCGCGTAAACGTTTCCAGTTGCCCTCTTTCTCCTTGCTGCGTTT GTCCGGCTCTCTCTCCCTTGGTCATCGGTGCCGTATTTTTACGATGTCAG GCGTTTTGGACACCACCGTCGGGGACGAGTCGAAGCGCGGCATCAGCGGC GGAGAGGCGAAGCGGCTCAGCATCGCGGTCGAGGCCATGGACCTCCCGGG GCTGCTGTTGCTCGACGAAGCCACTTCTGTGAGATTTATAGTGTTGTTAT TGCTGCTGTTGTTGCTGCTGCTGTTGTTGTGCTGCTGCTGCTGCTGTTGT TGTTATTGTTGCTGCTGTTGTGTGTGTGGTGTGGTTGTTGCTGCTGCTGC TGCTGCTGCTGTTGCTGTTGCTGTTGTTGTTGTTGCTGCTGCTGCTGTTG TTGCTGTTGTGTGTGTTGTGTCTGCTGCTGCTGCTGCTGCTGCTGCTGCT GCTGCTGCTGCTGTAACTCGAGGCAAATAAACGCCTGGGTGTCTCCGGGC ATGCCCCAGATCCTCTTCCTAAAGGACTACCTACTATCTCTACCTGCTCG TCGCCCGTCGCGCCGAACCGAACCGCTCCGTGTGTTTGCTCTCCCTCGCC CTCGCGCAGGGGTTGGATGCCACGACGGCGCTAGAGGTCCTCACCGCCGT CCGCGGCCTCGCTGATCTCGGCCGCACGGTTGTCGTCAGCCTGCACCAGC CCTCCGGGGAGATGTTTGAGCTGTTCGACACGTGCCTGCTGCTCGCGAGG GGGGGCTACCCCGCCTACTTCGGCAAGGCGAACCGGTGAGATAGTTGGGG CCGAAATCCGTCCGGTGACGCCGCCGCCGCCATCATTTTTGTCTTTTTTT TATTATCTAATGTAGCGCAGTATGTTTCGGCAGGGCAGCGAGTGGAGTTA TTGGCGAGAGAGAGAGAGAGAGAGAGAGAGAGGTTGCCGTGGCAACCGGC GTTTTGAGTTGCAGTGTCTGGAGTGGACGCAAAAGGGTTGCACCGGCAAT TGATGCCAAAACGGGATACACCCTCGTTCGGTCAGTAAGTAGCCTTCGCA GTTTTTTTTACTGGAATGAAGTATGGAAACGGCTAATGGGGGGTCGGTTT AGGGTTAGGGTTAGGGTTACGGAACCCCTGTCTATTATTTCGTGCAAGAC AGGAATATTTTCGCGAAGGGCGGTCCCGTTCGGTCATACGCAACAAAAAG GTTGCACCGGCAATTGATGCCAAGCCGGGACACCCTTGTTCCAGTGGTTC GGCGAGTCCACTCGGACCGGCTTGCAGGCAAAAAGAAAGCGCGAAGGTTT GGCTGCGGTGTTTGAATTATTTTTCATTTTTGTTATTCTTTTTGGCTTGG CTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTCGGGGGGATTGA ATCAATAAGGCTTGGACCCGAAGCGGGGGTGGGTGGTAATGTAGGAGTAT GTGTTTACCCTCGCTCTCTCTCCCCAGTCAGCCTTTTTTCTTGCTGCGAG ATAAAGTACATTCCTACGTACTACAGGGCCTTTTTGGCGAGGTATCTACG TAAGAGTCAGGCTTTCGGACGGTCAGACATGGGGCCGGGACTTGCCGAAC AACCGGCGCGCAGCATTGGTGCGGCGGCTGCTACATAGGTATTTATCCAC CCCTTTCTCTCGCCAAGCAAGCACACCGGGTCTGACAAGCCTCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCGGCCCCCGGGCGCCTCCCCCC CCCCCGGCGCTCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCCCCCCC CCCNNNNNNNNNNTTTCACTCTTGGTTTCTCCTCTCCCCCTCCCCCCCAC CACCACCCCCGCGGGTCTTGCACACCCCCCCCCCCCCCCCCCCCTCCCGT GCGACTCGTCCACAGGGCGATGGCGTACTTCGCGTCGATCGGCCTTTCCC CGCCGCCCTCCCCGACCTCGTCGGCGGCCTCGGCCGCCTCCGGGCAAAAC CCGGCCGACTTCCTCCTGTCCCTGCTGGCGGCGTCCTCGGCTTCGGACCG GTCTGTCACGGGGGAGGAGGGGGCGCCGCTGCTTCTGGACGACCCCGTGG ACGTCGGCGTCGAGAACGTCGGCATCAACAGCGGCCGCCCGAGAACAGCC GCCGCCGCCGTCGCCGCCGCCGCCGCCGCCGCCGATGCCGCGGCGGCGGC GGCGGCGGCTACGGGCCGCTCCTTTTCCGCCGGTGCGGCCGCCGCCGGCA GCGGCGCCGAAGAAGAAGGCGGGGGCAGAGACGAAAGTCACAGGGGCAGG AGCAGGAGCGGGAGCAGCGGCAGCAACAGCAGCAGCAGCAGCAGCAGCAG CGGTGGGAGTGGGAGGCCGTACGCCGTGACCCCCGCGGAGCTCGGGCGAG CGTACTACGAGTCGGCGGCCTCGGTGGGGATCAGGGAGGGGGTGGAGAGG GAGGCCGCGGAGGCGGCGGGGGCCCACAGGAGGGGCGGCGGCGGCGGGAG GCGGTGGCGGCGACGGAGGGGGAGCAGGAGCAGGAAGCGGAAGGACTACT CGACGGTCTGGCTGTCCGCCGTGCTCACTCAGCGGCAGGTT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9700:993..5733+

>mRNA_L-elsbetiae_contig9700.18675.1 ID=mRNA_L-elsbetiae_contig9700.18675.1|Name=mRNA_L-elsbetiae_contig9700.18675.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2520bp|location=Sequence derived from alignment at L-elsbetiae_contig9700:993..5733+ (Laminarionema elsbetiae ELsaHSoW15)
GGTCCCTCCGGGTCGGGAAAGACGACGCTGCTTGACCTTCTCGGCGGGCG
CAAGACTCGATCGGCCGGCAGGCAAGAGGGCGACATCATCGTCGACGGCG
TGCTGGGATCGGGCGGCGGGGCGAGCAGCGCCTACGTGATGCAGGGTCCC
TCCGGGTCGGGAAAGACGACGCTGCTTGACCTTCTCGGCGGGCGCAAGAC
TCGATCGGCCGGCAGGCAAGAGGGCGACATCATCGTCGACGGCGTGCTGG
GATCGGGCGGCGGGGCGAGCAGCGCCTACGTGATGCAGGATAACGTGCAC
CATGGCGCCCTCACGGTGCGGCAGACGCTTTCGTTCGCGGCAAAGCTCCG
CATGTCGAGCACAGCCACGGCGAGGGACAGGGACAGGCGGGTCGCCGCCA
TGGTCACCATGCTCGGGCTGCGCGGATAACGTGCACCATGGCGCCCTCAC
GGTGCGGCAGACGCTTTCGTTCGCGGCAAAGCTCCGCATGTCGAGCACAG
CCACGGCGAGGGACAGGGACAGGCGGGTCGCCGCCATGGTCACCATGCTC
GGGCTGCGCGGCGTTTTGGACACCACCGTCGGGGACGAGTCGAAGCGCGG
CATCAGCGGCGGAGAGGCGAAGCGGCTCAGCATCGCGGTCGAGGCCATGG
ACCTCCCGGGGCTGCTGTTGCTCGACGAAGCCACTTCTGCGTTTTGGACA
CCACCGTCGGGGACGAGTCGAAGCGCGGCATCAGCGGCGGAGAGGCGAAG
CGGCTCAGCATCGCGGTCGAGGCCATGGACCTCCCGGGGCTGCTGTTGCT
CGACGAAGCCACTTCTGGGTTGGATGCCACGACGGCGCTAGAGGTCCTCA
CCGCCGTCCGCGGCCTCGCTGATCTCGGCCGCACGGTTGTCGTCAGCCTG
CACCAGCCCTCCGGGGAGATGTTTGAGCTGTTCGACACGTGCCTGCTGCT
CGCGAGGGGGGGCTACCCCGCCTACTTCGGCAAGGCGAACCGGGGTTGGA
TGCCACGACGGCGCTAGAGGTCCTCACCGCCGTCCGCGGCCTCGCTGATC
TCGGCCGCACGGTTGTCGTCAGCCTGCACCAGCCCTCCGGGGAGATGTTT
GAGCTGTTCGACACGTGCCTGCTGCTCGCGAGGGGGGGCTACCCCGCCTA
CTTCGGCAAGGCGAACCGGGCGATGGCGTACTTCGCGTCGATCGGCCTTT
CCCCGCCGCCCTCCCCGACCTCGTCGGCGGCCTCGGCCGCCTCCGGGCAA
AACCCGGCCGACTTCCTCCTGTCCCTGCTGGCGGCGTCCTCGGCTTCGGA
CCGGTCTGTCACGGGGGAGGAGGGGGCGCCGCTGCTTCTGGACGACCCCG
TGGACGTCGGCGTCGAGAACGTCGGCATCAACAGCGGCCGCCCGAGAACA
GCCGCCGCCGCCGTCGCCGCCGCCGCCGCCGCCGCCGATGCCGCGGCGGC
GGCGGCGGCGGCTACGGGCCGCTCCTTTTCCGCCGGTGCGGCCGCCGCCG
GCAGCGGCGCCGAAGAAGAAGGCGGGGGCAGAGACGAAAGTCACAGGGGC
AGGAGCAGGAGCGGGAGCAGCGGCAGCAACAGCAGCAGCAGCAGCAGCAG
CAGCGGTGGGAGTGGGAGGCCGTACGCCGTGACCCCCGCGGAGCTCGGGC
GAGCGTACTACGAGTCGGCGGCCTCGGTGGGGATCAGGGAGGGGGTGGAG
AGGGAGGCCGCGGAGGCGGCGGGGGCCCACAGGAGGGGCGGCGGCGGCGG
GAGGCGGTGGCGGCGACGGAGGGGGAGCAGGAGCAGGAAGCGGAAGGACT
ACTCGACGGTCTGGCTGTCCGCCGTGCTCACTCAGCGGCAGGTTGGCGAT
GGCGTACTTCGCGTCGATCGGCCTTTCCCCGCCGCCCTCCCCGACCTCGT
CGGCGGCCTCGGCCGCCTCCGGGCAAAACCCGGCCGACTTCCTCCTGTCC
CTGCTGGCGGCGTCCTCGGCTTCGGACCGGTCTGTCACGGGGGAGGAGGG
GGCGCCGCTGCTTCTGGACGACCCCGTGGACGTCGGCGTCGAGAACGTCG
GCATCAACAGCGGCCGCCCGAGAACAGCCGCCGCCGCCGTCGCCGCCGCC
GCCGCCGCCGCCGATGCCGCGGCGGCGGCGGCGGCGGCTACGGGCCGCTC
CTTTTCCGCCGGTGCGGCCGCCGCCGGCAGCGGCGCCGAAGAAGAAGGCG
GGGGCAGAGACGAAAGTCACAGGGGCAGGAGCAGGAGCGGGAGCAGCGGC
AGCAACAGCAGCAGCAGCAGCAGCAGCAGCGGTGGGAGTGGGAGGCCGTA
CGCCGTGACCCCCGCGGAGCTCGGGCGAGCGTACTACGAGTCGGCGGCCT
CGGTGGGGATCAGGGAGGGGGTGGAGAGGGAGGCCGCGGAGGCGGCGGGG
GCCCACAGGAGGGGCGGCGGCGGCGGGAGGCGGTGGCGGCGACGGAGGGG
GAGCAGGAGCAGGAAGCGGAAGGACTACTCGACGGTCTGGCTGTCCGCCG
TGCTCACTCAGCGGCAGGTT
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