mRNA_L-elsbetiae_contig9700.18675.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Match: A0A6H5KKK8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK8_9PHAE) HSP 1 Score: 369 bits (946), Expect = 3.050e-111 Identity = 270/443 (60.95%), Postives = 297/443 (67.04%), Query Frame = 1 Query: 1 GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIVDGVLGSGGGA--------SSAYVMQDNVHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTVGDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAVRGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYFASIGLSPPPSPTSSAASAASGQNPADFLLSLLAASS-----------ASDRSVTGEEGAPLLLDDPVDVGVENVGINSGRPRTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGRPY----AVTPAELGRAYYESAASVGIREGVEREAAEAAGAHRXXXXXXXXXXXXXGSRSRKRKDYSTVWLSAVLTQRQV 1260 GPSGSGKTTLLDLLGGRKTRS GRQEGDI+VDGV G GG SAYVMQDNVHH +LTVRQTL FAAKLRMS+T TA DR++RVAAMVTMLGL GVL+TTVGDES RGISGGEAKRLS+AVEA+DLPGLLLLDE TSGLDATTALEVLTAVRGLADLGRTV++SLHQPSGEMFEL D CLLLARGGYPAYFG+ANRAMAYFAS+GL+PPPS S + QNPADFLLSLLA SS ASD + G+ L + G++ T AXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX Y VTPAELGRA+ +S+ SVGIR+ EREAAEA R G+ R S +WLSAVLT R++ Sbjct: 1103 GPSGSGKTTLLDLLGGRKTRSVGRQEGDIVVDGVFGREGGVVSRGSGVGGSAYVMQDNVHHASLTVRQTLQFAAKLRMSNTVTAEDREKRVAAMVTMLGLEGVLETTVGDESNRGISGGEAKRLSVAVEAIDLPGLLLLDEPTSGLDATTALEVLTAVRGLADLGRTVILSLHQPSGEMFELLDVCLLLARGGYPAYFGRANRAMAYFASVGLTPPPSSAS-----VTDQNPADFLLSLLAQSSPSSNNGTLTATASDDGDQHDRGSSLPTSSSSSPSRFSAGVDIAP--TMAXXXXXXXXXXXXXXXXXXXXGLSPLLDVDLGIGHVGVEVGQGLSTPSRRGGGFSGIGXXXXXXXXXXXXXXXYNGRRPVTPAELGRAFLQSSLSVGIRQEAEREAAEAGVRRRDAERMGLTVD---GAEEAGRGWRSMLWLSAVLTHREL 1535
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Match: D8LSM1_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM1_ECTSI) HSP 1 Score: 363 bits (933), Expect = 1.600e-110 Identity = 198/251 (78.88%), Postives = 213/251 (84.86%), Query Frame = 1 Query: 1 GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIVDGVLGSGGGA--------SSAYVMQDNVHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTVGDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAVRGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYFASIGLSPPPSPTSSAASAASGQNPADFLLSLLAASSASDRSVT 729 GPSGSGKTTLLDLLGGRKTRS GRQEGDI+VDGV G GG SAYVMQDNVHH +LTVRQTL FAAKLRM +T TA DR++RVAAMVTMLGL GVL+TTVGDES RGISGGEAKRLS+AVEA+DLPGLLLLDE TSGLDATTALEVLTAVRGLADLGRTV++SLHQPSGEMFEL D CLLLARGGYPAYFG+ANRAMAYFAS+GL+PPPS S + QNPADFLLSLLA SS S + T Sbjct: 700 GPSGSGKTTLLDLLGGRKTRSVGRQEGDIVVDGVFGREGGVVSRGSGVGGSAYVMQDNVHHASLTVRQTLQFAAKLRMCNTVTAEDREKRVAAMVTMLGLEGVLETTVGDESNRGISGGEAKRLSVAVEAIDLPGLLLLDEPTSGLDATTALEVLTAVRGLADLGRTVILSLHQPSGEMFELLDVCLLLARGGYPAYFGRANRAMAYFASVGLTPPPSSAS-----VTDQNPADFLLSLLAQSSPSSNNGT 945
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Match: A0A6J0M9T5_RAPSA (ABC transporter G family member 22-like n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0M9T5_RAPSA) HSP 1 Score: 178 bits (451), Expect = 1.040e-46 Identity = 120/280 (42.86%), Postives = 160/280 (57.14%), Query Frame = 1 Query: 1 GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIVDGVLGSGGGASSAY-------VMQDNVHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTVGDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAVRGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYFASIGLSPPPSPTSSAASAASGQNPADFLLSLLAASSASDRSVTGEEGAPLLLDDPVDVGVENVGINSGRPRTA 819 GPSGSGKTTLL LLGGR ++SA + G + S Y V QD+V LTV++TL++AA+LR+ T T +++R ++ LGL DT +G RG+SGGE KR+SI E + P LLLLDE TSGLD+TTAL + + +A+ G+TV+ ++HQPS +F FD +LL RG YFGK++ A+ YF+SIG SP NPA+FLL L A + SD SV E LDD V VG+ N +G+P A Sbjct: 2 GPSGSGKTTLLSLLGGRISQSA--------IGGSITYNNKPYSKYLKSKIGFVTQDDVLFPHLTVKETLTYAARLRLPKTLTREQKEQRAIGVIQELGLERCQDTMIGGAFVRGVSGGERKRVSIGNEIIINPSLLLLDEPTSGLDSTTALRTIQMLHDIAEAGKTVITTIHQPSSRLFHRFDKLILLGRGNL-LYFGKSSEALDYFSSIGCSP-----------LIAMNPAEFLLDL-ANGNISDISVPSE------LDDRVQVGISNRESQTGKPSPA 254
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Match: W7TLH8_9STRA (Abc transporter g family member 29 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLH8_9STRA) HSP 1 Score: 181 bits (458), Expect = 4.310e-46 Identity = 107/230 (46.52%), Postives = 147/230 (63.91%), Query Frame = 1 Query: 1 GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIVDGVLGSGGGASSAYVMQDNVHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTVGDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAVRGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYFASIGLSPPPSPTSSAASAASGQNPADFLLS 690 G SG+GKTTLLD+L GRKT AG EG++ +G G +YV QDNVH G TVR+TL FAA LR+ R++ V ++ MLGL V D VGD ++GISGG+A+RL+I VE ++LPG++ LDE T+GLD+ + EV+ AVR LA+ RTV ++HQPS E+F LFD +L+A+G YFG + A+ YF+S L + + G NPA+F++S Sbjct: 695 GGSGAGKTTLLDVLAGRKT--AGLIEGEVFFNGKAGMPSPKLCSYVTQDNVHIGCFTVRETLHFAALLRIKEGVRPAQREKMVDDVLGMLGLDSVADVMVGDSLRKGISGGQARRLTIGVEIINLPGMIFLDEPTTGLDSNISYEVMAAVRNLANQNRTVCCTIHQPSIEVFALFDKLILMAKGEQ-VYFGATHEAVKYFSSPALD---------FAFSKGVNPAEFVMS 912
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Match: A0A5K0VPC4_9MAGN (ABC transporter domain-containing protein (Fragment) n=1 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K0VPC4_9MAGN) HSP 1 Score: 170 bits (430), Expect = 4.420e-46 Identity = 104/232 (44.83%), Postives = 146/232 (62.93%), Query Frame = 1 Query: 1 GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIVDGV-LGSGGGASSAYVMQDNVHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTVGDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAVRGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYFASIGLSPPPSPTSSAASAASGQNPADFLLSL 693 GPSGSGKTTLL LGGR GR G + +G+ + + +V QD+V H LTV +TL F A+LR+ + TA+++ + A++ LGL G ++ +G RG+SGGE KR+S+ E + P LLLLDE TSGLD+TTA +++ + GLA GRT+V+++HQPS ++ LF+ LLL+ G+P YFG+A+ A+ YF+SIG SP NPADFLL L Sbjct: 80 GPSGSGKTTLLTALGGRL---GGRLAGSVTYNGIPFCNSVKRNMGFVTQDDVLHPHLTVTETLVFTAQLRLPNIMTAQEKASQAEAVIAELGLAGCRNSVIGGNFLRGVSGGERKRVSVGQEMLINPSLLLLDEPTSGLDSTTAQRLVSTLAGLAKGGRTIVMTIHQPSSRLYYLFNKVLLLS-DGHPFYFGQASGALDYFSSIGHSP-----------TLAMNPADFLLDL 296
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Match: A0A2U1LD00_ARTAN (AAA+ ATPase domain-containing protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1LD00_ARTAN) HSP 1 Score: 174 bits (440), Expect = 2.910e-45 Identity = 116/274 (42.34%), Postives = 162/274 (59.12%), Query Frame = 1 Query: 1 GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIV-DGVLGSGGGASSAYVMQDNVHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTVGDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAVRGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYFASIGLSPPPSPTSSAASAASGQNPADFLLSLLAASSASDRSVTGEEGAPLLLDDPVDVGVENVGINSGRPRTA 819 GPSGSGKTTLL LLGGR T + Q G I D + +V QD++ LTV++T+++AA LR+ T T ++++ + A ++ LGL DT +G+ RG+SGGE KR+SI E + P LL LDE TSGLD+TTAL ++ ++ +A+ G+TV+ ++HQPS +F FD +LL +G YFGKA+ AM YF+SIG SP S NPA+FLL L A + +D SV E L+D VD+G +G+P A Sbjct: 187 GPSGSGKTTLLSLLGGRVTDA--NQGGSITYNDQPYSKFLKSRIGFVTQDDILFPHLTVKETITYAALLRLPKTLTKQEKENQAADIIRELGLERCQDTMIGNSFVRGVSGGERKRVSIGNEIIINPSLLFLDEPTSGLDSTTALRIIELLQDIAETGKTVITTIHQPSSRLFHKFDKLILLGKGSL-LYFGKASEAMTYFSSIGCSPLIS-----------MNPAEFLLDL-ANGNLNDVSVPHE------LEDKVDLGNSGRETRNGKPSPA 439
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Match: A0A8E6YI21_SALMI (ABC transporter n=1 Tax=Salvia miltiorrhiza TaxID=226208 RepID=A0A8E6YI21_SALMI) HSP 1 Score: 174 bits (441), Expect = 4.050e-45 Identity = 116/274 (42.34%), Postives = 155/274 (56.57%), Query Frame = 1 Query: 1 GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIV-DGVLGSGGGASSAYVMQDNVHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTVGDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAVRGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYFASIGLSPPPSPTSSAASAASGQNPADFLLSLLAASSASDRSVTGEEGAPLLLDDPVDVGVENVGINSGRPRTA 819 GPSGSGKT+LL LLGGR T A G I D +V QD+V LTVR+TL++AA+LR+ T T ++D+R + ++ LGL DT +G RG+SGGE KR+ I E + P LL LDE TSGLD+TTAL ++ + +A+ G+TVV ++HQPS +F FD +LL +G YFGK + AM YF+SIG SP NPA+F+L L A + +D SV E L+D V +G SG+P A Sbjct: 27 GPSGSGKTSLLSLLGGRVTEPA--HGGSITYNDQAYSKSLKCRIGFVTQDDVLFPHLTVRETLTYAARLRLPKTLTKEEKDQRASDVIYELGLESCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVDTLHDIAEAGKTVVTTIHQPSSRLFLKFDKLILLGKGSL-LYFGKVSEAMVYFSSIGCSP-----------LIAMNPAEFMLDL-ANGNVTDISVPSE------LEDKVQMGNSTTETKSGKPAPA 279
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Match: A0A4D9C2V9_SALSN (ABC transporter domain-containing protein n=3 Tax=Salvia TaxID=21880 RepID=A0A4D9C2V9_SALSN) HSP 1 Score: 174 bits (442), Expect = 5.100e-45 Identity = 115/274 (41.97%), Postives = 153/274 (55.84%), Query Frame = 1 Query: 1 GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIV-DGVLGSGGGASSAYVMQDNVHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTVGDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAVRGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYFASIGLSPPPSPTSSAASAASGQNPADFLLSLLAASSASDRSVTGEEGAPLLLDDPVDVGVENVGINSGRPRTA 819 GPSGSGKT+LL LLGGR G I D +V QD+V LTVR+TL++AA+LR+ T T ++D+R + ++ LGL DT +G RG+SGGE KR+ I E + P LL LDE TSGLD+TTAL ++ + +A+ G+TVV ++HQPS +F FD +LL +G YFGK + AM YF+SIG SP NPA+F+L L A + +D SV E LDD V +G SG+P A Sbjct: 66 GPSGSGKTSLLSLLGGRGRVREPAHGGSITYNDQPYSKSLKCRIGFVTQDDVLFPHLTVRETLTYAARLRLPKTLTKEEKDKRASDVIYELGLESCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVDTLHDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSL-LYFGKVSEAMVYFSSIGCSP-----------LIAMNPAEFMLDL-ANGNVTDISVPSE------LDDRVQIGDSTTETKSGKPAPA 320
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Match: A0A7N1A6Y3_KALFE (ABC transporter domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N1A6Y3_KALFE) HSP 1 Score: 173 bits (439), Expect = 1.250e-44 Identity = 113/274 (41.24%), Postives = 162/274 (59.12%), Query Frame = 1 Query: 1 GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIVDGVLGSGGGASSAYVMQDNVHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTVGDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAVRGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYFASIGLSPPPSPTSSAASAASGQNPADFLLSLLAASSASDRSVTGEEGAPLLLDDPVDVGVENVGINSGRPRTAA 822 GPSGSGKTTLL+LLGGR S G++ D + +V QD+V LTV++TL+++A+LR+S T T +++++R + ++ LGL DT +G RG+SGGE KR+ I E + P LL LDE TSGLD+TTAL ++ ++ +A+ G+TV+ ++HQPS +F FD +LL +G YFG+A+ A+ YFASIG SP NPA+FLL L A + SD SV E L++ V +G + G+P AA Sbjct: 185 GPSGSGKTTLLNLLGGR-LNSQGQRGSVTYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYSARLRLSKTMTKQEKEKRASDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEILINPSLLFLDEPTSGLDSTTALRIVQMLQDIAESGKTVITTIHQPSSRLFHKFDKLILLGKGSL-LYFGRASEALEYFASIGCSP-----------LIAMNPAEFLLDL-ANGNVSDVSVPSE------LEEKVQMGSSERHMKDGKPSPAA 438
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Match: A0A2U1LCX9_ARTAN (AAA+ ATPase domain-containing protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1LCX9_ARTAN) HSP 1 Score: 174 bits (440), Expect = 3.080e-44 Identity = 116/274 (42.34%), Postives = 162/274 (59.12%), Query Frame = 1 Query: 1 GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIV-DGVLGSGGGASSAYVMQDNVHHGALTVRQTLSFAAKLRMSSTATARDRDRRVAAMVTMLGLRGVLDTTVGDESKRGISGGEAKRLSIAVEAMDLPGLLLLDEATSGLDATTALEVLTAVRGLADLGRTVVVSLHQPSGEMFELFDTCLLLARGGYPAYFGKANRAMAYFASIGLSPPPSPTSSAASAASGQNPADFLLSLLAASSASDRSVTGEEGAPLLLDDPVDVGVENVGINSGRPRTA 819 GPSGSGKTTLL LLGGR T + Q G I D + +V QD++ LTV++T+++AA LR+ T T ++++ + A ++ LGL DT +G+ RG+SGGE KR+SI E + P LL LDE TSGLD+TTAL ++ ++ +A+ G+TV+ ++HQPS +F FD +LL +G YFGKA+ AM YF+SIG SP S NPA+FLL L A + +D SV E L+D VD+G +G+P A Sbjct: 187 GPSGSGKTTLLSLLGGRVTDA--NQGGSITYNDQPYSKFLKSRIGFVTQDDILFPHLTVKETITYAALLRLPKTLTKQEKENQAADIIRELGLERCQDTMIGNSFVRGVSGGERKRVSIGNEIIINPSLLFLDEPTSGLDSTTALRIIELLQDIAETGKTVITTIHQPSSRLFHKFDKLILLGKGSL-LYFGKASEAMTYFSSIGCSPLIS-----------MNPAEFLLDL-ANGNLNDVSVPHE------LEDKVDLGNSGRETRNGKPSPA 439 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9700.18675.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9700.18675.1 >prot_L-elsbetiae_contig9700.18675.1 ID=prot_L-elsbetiae_contig9700.18675.1|Name=mRNA_L-elsbetiae_contig9700.18675.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=420bp GPSGSGKTTLLDLLGGRKTRSAGRQEGDIIVDGVLGSGGGASSAYVMQDNback to top mRNA from alignment at L-elsbetiae_contig9700:993..5733+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9700.18675.1 ID=mRNA_L-elsbetiae_contig9700.18675.1|Name=mRNA_L-elsbetiae_contig9700.18675.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4741bp|location=Sequence derived from alignment at L-elsbetiae_contig9700:993..5733+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9700:993..5733+ >mRNA_L-elsbetiae_contig9700.18675.1 ID=mRNA_L-elsbetiae_contig9700.18675.1|Name=mRNA_L-elsbetiae_contig9700.18675.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2520bp|location=Sequence derived from alignment at L-elsbetiae_contig9700:993..5733+ (Laminarionema elsbetiae ELsaHSoW15)back to top |