mRNA_L-elsbetiae_contig9694.18667.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9694.18667.1 vs. uniprot
Match: D8LGV9_ECTSI (FHA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV9_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 6.190e-18 Identity = 136/385 (35.32%), Postives = 163/385 (42.34%), Query Frame = 1 Query: 133 DLDVSKNRRDGVKGEARLIGANLEASSKQKAVNLEKDLHELVQYLNIPTGTIMADSQGAGSFGEKRRGXXXXXXXXXXXXXXXXXXXXVAPGDDSSVPGGSG-DGXXRGRGGEVGR-----SLAGAVP---VAXXXXXXXXXXXXXXXHGGVEXXXXXXXXXXXXXXXXXXXXXXXXXNNTQGDQXXXRGXXXXXXXXXXXXXXXXXXXXVDGERSAEGGSDEDGGGKEREEIDTEXXXXXXXXXXXXXXXXXXXXXXRRLMGMEGGDGTGGGQEEPALSGPSAM-PHVGVRLHEGYGDXXXXXXXXXXXXXXXXGDEEFTVPPLDFGRGTRSTGAPGGVATTAXXXXXXXXAGGEQNGAAEVETELLTVSEIEQRM--LEDPMP 1251 DL+VSKNRRDGVKGEAR IG NL+ +KQKA+ L K+L EL+QYL++P G ++ADSQGA S G+ X SG D R G E+ + G P GGV XXXXXXXXXXX +NTQGD+ RG D +++A G D DGG R+E G E + G E +LSGP+A PH VRL +G+GD + EFTVPPLDFGRGTR A G A E NG AE ETELLTVSE+EQ+M LED P Sbjct: 487 DLEVSKNRRDGVKGEARFIGTNLK-KAKQKALVLNKELMELMQYLDVPVGNMLADSQGAPSLGDPTVDDAIANGGCGSHGSPDPNGNXXXXXXXXXXXXNSGADSPARSLGNEMDEVERLDATQGNGPSSGATDAEGEGTANGGSCEEDGGVAPDAGAGGGDXXXXXXXXXXXEEM--HNTQGDEE--RGSEEAPKARAQPNGTAEVC--ADEDQTA--GRD-DGGDSTRDE------------------------------GNENDEEQGQLLLEVSLSGPAAAAPHGAVRLDQGFGDED---------------ETEFTVPPLDFGRGTRGGPAEGVDQAGGGGGTLVSAAPREDNGVAEQETELLTVSELEQQMSKLEDAAP 816
BLAST of mRNA_L-elsbetiae_contig9694.18667.1 vs. uniprot
Match: A0A6H5KXX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX6_9PHAE) HSP 1 Score: 71.6 bits (174), Expect = 1.630e-9 Identity = 50/111 (45.05%), Postives = 60/111 (54.05%), Query Frame = 1 Query: 928 EEPALSGPSAM-PHVGVRLHEGYGDXXXXXXXXXXXXXXXXGDEEFTVPPLDFGRGTRSTGAPGGVATTAXXXXXXXXAGGEQNGAAEVETELLTVSEIEQRM--LEDPMP 1251 +E +LSGP+A PH VRL +G+GD + EF+VPPLDFGRGTR A G A E NG AE ETELLTVSE+EQ+M +ED P Sbjct: 502 QEVSLSGPAAAAPHGAVRLDQGFGDED---------------ETEFSVPPLDFGRGTRGGPAEGVGQAGGGGGTLVSTAPREDNGVAEQETELLTVSELEQQMSKVEDASP 597 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9694.18667.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9694.18667.1 >prot_L-elsbetiae_contig9694.18667.1 ID=prot_L-elsbetiae_contig9694.18667.1|Name=mRNA_L-elsbetiae_contig9694.18667.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=482bp QKLLEESVLSEGAAKADASRLSQELEESQKSNRALDAELLQAKLDLDVSKback to top mRNA from alignment at L-elsbetiae_contig9694:1611..7568- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9694.18667.1 ID=mRNA_L-elsbetiae_contig9694.18667.1|Name=mRNA_L-elsbetiae_contig9694.18667.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5958bp|location=Sequence derived from alignment at L-elsbetiae_contig9694:1611..7568- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9694:1611..7568- >mRNA_L-elsbetiae_contig9694.18667.1 ID=mRNA_L-elsbetiae_contig9694.18667.1|Name=mRNA_L-elsbetiae_contig9694.18667.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2892bp|location=Sequence derived from alignment at L-elsbetiae_contig9694:1611..7568- (Laminarionema elsbetiae ELsaHSoW15)back to top |