mRNA_L-elsbetiae_contig9690.18662.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9690.18662.1
Unique NamemRNA_L-elsbetiae_contig9690.18662.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig9690.18662.1 vs. uniprot
Match: A0A6H5J623_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J623_9PHAE)

HSP 1 Score: 471 bits (1211), Expect = 1.450e-155
Identity = 324/567 (57.14%), Postives = 363/567 (64.02%), Query Frame = 1 
Query:    1 MLRRGVAILAATLLLLKAYSSGSGERKDVNGDDPRHRQSNHRANRTRKSSLAEDALSRYPQTGKFGPRHKTGVAVSSRDPCDEVERWEEEMEESWAETLAALAASGTALALQTV--PES---------GRRXXXXXXXXXXXXXXXXXXXXXXVV---ERLQAELAATLDTLSSWRRRXXXXXXXWPRPTLAARQHLGQLTARLSGATAAAGQRAGALLSAARESGDRGLRITGGYGELLRGRGHGLLLRSVEILRRGAXXXXXXXXXXXXXXXXEGEWEGSR-LMRLTDMTVQNVVDVVARDGWEHVATTSGVVVHRQYIALGADGTPLEETDAAAGAVAGXXXXAGEVRTTVEPSAVVVRGSSXXXXXXXXXXXXXXXXXXGSVGID----KAPRFACVKATAIICVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCASSPVTFIRRLEVAAQKLMVELQQ 1644
            MLR  VAILAATLLLL+ +S   G    +  D  +HR+  H  +       A+D  SRYPQTG+F  +HK G+ V  +   +E   WEE   E W+ T+AA+ ASG+ LALQ    P+          GR+     XXXXXXXXXXXXXXX        R++AEL+A LD   +WR R        P   +  RQHL  LTA+LS  T    +RA  LLSAA  SG+ G+RI G   ELLR RG  L L     LR+                  E E    R L  LTD  VQNVVDVVARDGWE V    GVVVHRQY+ALG DGTP      AA A A     A     +V      V GS+                    VG D    + P+FACVKA+AI+ VPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVS+PVEHPAAPR+SRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLC SSPVTFIRRLEVAA+KLM+ELQQ
Sbjct:    1 MLRERVAILAATLLLLECHSMSGGATGAI-PDQQQHRR--HVPHYGCTPQRAQDFGSRYPQTGRFEAQHKRGLVVDDQPAGEE---WEEADLECWSATMAAIVASGSTLALQRTLKPDEQQSASAEGYGRQQRHIRXXXXXXXXXXXXXXXNSSAPRFRRIRAELSANLD---AWRMRRRRARETIPAAAIVIRQHLTHLTAQLSELTGEGFRRAERLLSAANASGNVGIRIAG-CAELLRRRGRELFLLG---LRKRQNPDGSGGDKLGMGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPAAHAQAAGVPKAEAYSASVGGR---VEGSADDP---------------APVGEDSGKFRPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLELQQ 536
[Close]
BLAST of mRNA_L-elsbetiae_contig9690.18662.1 vs. uniprot
Match: D8LLJ0_ECTSI (START domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ0_ECTSI)

HSP 1 Score: 469 bits (1206), Expect = 1.830e-155
Identity = 325/576 (56.42%), Postives = 360/576 (62.50%), Query Frame = 1 
Query:    1 MLRRGVAILAATLLLLKAYSSGSGERKDVNGDDPRHRQSNHRANRTRKSSLAEDALSRYPQTGKFGPRHKTGVAVSSRDPCDEVERWEEEMEESWAETLAALAASGTALALQTV-----------------PESGRRXXXXXXXXXXXXXXXXXXXXXXVVERLQAELAATLDTLSSWRRRXXXXXXXWPRPTLAARQHLGQLTARLSGATAAAGQRAGALLSAARESGDRGLRITGGYGELLRGRGHGLLLRSVEILRRGAXXXXXXXXXXXXXXXXEGEWEGSR---LMRLTDMTVQNVVDVVARDGWEHVATTSGVVVHRQYIALGADGTP-----LEETDAAAG---AVAGXXXXAGEVRTTVEPSAVVVRGSSXXXXXXXXXXXXXXXXXXGSVGIDKAPRFACVKATAIICVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCASSPVTFIRRLEVAAQKLMVELQQ 1644
            MLR  VAILAATLLLLK +S   G    +  D  +HR+  H  +       A+D  SRYPQTG+F   HK G+ +      +E   WE    E W  T+AA+ ASG+ LALQ                   P   RRXXXXXXXXXXXXXXXX         R++AEL+A LD   +WR R        P   +  RQHL QLTA+LS  T    +RA  LLSAA+ SG+ G+RI G   ELLR RG  L L  +    R                  EGE E  +   L  LTD  VQNVVDVVARDGWE V    GVVVHRQY+ALG DGTP           AAG   A A      G V  + + S  V   S                      G  K P+FACVKA+AI+ VPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVS+PVEHPAAPR+SRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLC SSPVTFIRRLEVAA+KLM+ELQQ
Sbjct:   34 MLRERVAILAATLLLLKCHSMSGGATGAL-PDQQQHRR--HVPHYGCTPPRAQDFGSRYPQTGRFEAWHKRGLVLDDEPAGEE---WEGADRECWGATIAAIVASGSTLALQRTLKPDEQQSASAEGYGRQPRHYRRXXXXXXXXXXXXXXXXSAPRF---RRMRAELSANLD---AWRMRRRRARETTPAAAIVIRQHLTQLTAQLSELTGEGFRRAERLLSAAKASGNVGIRIAG-CAELLRRRGRELFLLGL----RKKQNPDGLGGEGKLGKGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAXXXXXXXXQAAGVPKAEASSAFVGGRVEGSADDSVPVGDDS----------------------GKSKPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLELQQ 570
[Close]
BLAST of mRNA_L-elsbetiae_contig9690.18662.1 vs. uniprot
Match: A0A7S2V5A8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5A8_9STRA)

HSP 1 Score: 207 bits (526), Expect = 6.200e-57
Identity = 96/166 (57.83%), Postives = 124/166 (74.70%), Query Frame = 1 
Query: 1132 RFACVKATAIICVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCASSPVTFIRRLEVAAQKLM 1629
            +FA +KA   I  P E V+ LF DNSRVGEYN+HC E+KDLE +   +K+TW+ASG+ GPFKARDFCTLVHF TL+DGT A VS P  HP AP +SRYVRSE+++AG+FMR  P DP++T F  +T VNPGG A +   A +VNSL    P+TF++++E+AAQ+ M
Sbjct:  219 KFAVIKAVGTIDAPIEEVHKLFVDNSRVGEYNDHCHEIKDLEWVGPRTKVTWSASGKYGPFKARDFCTLVHFATLADGTQAIVSVPFNHPQAPATSRYVRSEVIMAGHFMRRDPKDPNKTAFTTITQVNPGGIAGSAGAAKIVNSLSTQGPITFVKKVELAAQQTM 384
[Close]
BLAST of mRNA_L-elsbetiae_contig9690.18662.1 vs. uniprot
Match: I2CRQ3_NANGC (Lipid transfer protein 5-like protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRQ3_NANGC)

HSP 1 Score: 198 bits (503), Expect = 1.050e-56
Identity = 87/144 (60.42%), Postives = 116/144 (80.56%), Query Frame = 1 
Query: 1132 RFACVKATAIICVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVN 1563
            RFACVKA  ++  P + V+ LF D++RVGEYNEHCRE++D++ LS ++K+TW+ASGR GPFKARDFCT+VH+R L DG L  V+R  EH  APRS +YVRSEILLAGN MRP P DP++T  + +TH+NPGG+ +++AGA++VN
Sbjct:   16 RFACVKAVGVVDAPVDRVFDLFLDSARVGEYNEHCREIQDIDTLSANTKVTWSASGRYGPFKARDFCTVVHYRRLEDGRLVVVNRAAEHVRAPRSDKYVRSEILLAGNIMRPHPSDPNKTLLVTLTHINPGGSIDSKAGALMVN 159
[Close]
BLAST of mRNA_L-elsbetiae_contig9690.18662.1 vs. uniprot
Match: A0A6U4ZLH7_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4ZLH7_HEMAN)

HSP 1 Score: 198 bits (503), Expect = 1.770e-55
Identity = 90/173 (52.02%), Postives = 124/173 (71.68%), Query Frame = 1 
Query: 1105 GSVGIDKAPRFACVKATAIICVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCASSPVTFIRRLEVAAQK 1623
            G   + +A +F CVKA A++   P  VY LF DN+RV EYNE C++++DLE  +  +K+TW+AS R+GPFK RDF T VH+RTL D TL  V+R  +HPAAP++ RY+R EI+L GN M+PVP DP +T F M+THVNPGG A TR G M++NS  A+ P++F++ L  A ++
Sbjct:   28 GGRPVGEASKFLCVKAEAVLDASPAQVYTLFVDNTRVREYNEFCKQIRDLEYKNSTTKVTWSASARIGPFKERDFVTRVHYRTLPDQTLLVVNRAEDHPAAPQTDRYLRMEIVLGGNVMKPVPSDPEKTMFTMLTHVNPGGVAGTRMGTMIMNSAAANGPISFVQGLRDALKR 200
[Close]
BLAST of mRNA_L-elsbetiae_contig9690.18662.1 vs. uniprot
Match: A0A7S2RES9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RES9_9STRA)

HSP 1 Score: 196 bits (499), Expect = 6.920e-54
Identity = 91/165 (55.15%), Postives = 119/165 (72.12%), Query Frame = 1 
Query: 1126 APRFACVKATAIICVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCASSPVTFIRRLEVAAQ 1620
            A +F+CVKATAI+   P  VY LF DNS+V EYNEHC++++D+E +S+D+K+ W+ +   GPFK RDF T+VH+R   DGTL  ++RP  HP  P   ++ R+E+LLAGN MRPV GD S+TEF M+THVNPGG      GA +VN +C+  PV FIRRLE AAQ
Sbjct:  133 AAKFSCVKATAILNASPHDVYKLFLDNSQVHEYNEHCQKLEDVERVSKDTKVAWSVTAPFGPFKPRDFVTMVHYRREPDGTLMVLNRPCNHPDRPPVPQFQRAELLLAGNVMRPVQGDKSKTEFTMITHVNPGGVVNNALGAAIVNRICSQGPVDFIRRLERAAQ 297
[Close]
BLAST of mRNA_L-elsbetiae_contig9690.18662.1 vs. uniprot
Match: D8LAW9_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW9_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 1.390e-53
Identity = 126/290 (43.45%), Postives = 166/290 (57.24%), Query Frame = 1 
Query:  784 EGEWEGSRLMRL---TDMTVQNVVDVVARDGWEHVATTSGVVVHRQYIALGADGTPLEETDAAAGAVAGXXXXAGEVRTTVEPSAVVVRGSSXXXXXXXXXXXXXXXXXXGSVGIDKAPRFACVKATAIICVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCASSPVTFIRRLEVAAQKLMVELQQ 1644
            EGE   + ++ L    D +V+ V+ V+  DGWE V   SGVVV R+++                                                 XXXXXXXXXXXX G V    A +FACVKA   +      +Y LF DN RV EYN++C+EV+DLE LS D+K++WA + R  PFKARDF T VH+RTL DGT+  ++RPVEHPAA R  +YVR+EIL+A N MRP   DPS+T+F+ VTH+NPGG A++R GA +VN LCA +PV  +  LE +A    V  ++
Sbjct:  236 EGEVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVXX-----------------------------------------------XXXXXXXXXXXXRGIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAPVPKEE 478
[Close]
BLAST of mRNA_L-elsbetiae_contig9690.18662.1 vs. uniprot
Match: A0A6H5JSI0_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI0_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 4.310e-53
Identity = 94/175 (53.71%), Postives = 124/175 (70.86%), Query Frame = 1 
Query: 1120 DKAPRFACVKATAIICVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCASSPVTFIRRLEVAAQKLMVELQQ 1644
            + A +FACVKA   +      +Y LF DN RV EYN++C+EV+DLE LS D+K++WA + R  PFKARDF T VH+RTL DGT+  V+RPVEHPAA R  +YVR+EIL+A N MRP   DPS+T+F+ VTH+NPGG A++R GA +VN LCA +PV  +  LE +A    V  ++
Sbjct:  239 EAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVVNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSANSAPVPREE 413
[Close]
BLAST of mRNA_L-elsbetiae_contig9690.18662.1 vs. uniprot
Match: A0A7S0QTI7_9CRYP (Hypothetical protein (Fragment) n=2 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QTI7_9CRYP)

HSP 1 Score: 184 bits (466), Expect = 5.020e-50
Identity = 85/161 (52.80%), Postives = 116/161 (72.05%), Query Frame = 1 
Query: 1126 APRFACVKATAIICVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHP-AAPRSSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCASSPVTFIRRL 1605
            A +F C+KA  ++  PP  V+ LF DN+R GEYNE CRE++D+E +   +K+TW+ASGR+GPFK RDF T VH+R+L DGTL  V+R  + P  A  S RY+R E+ L G+ +RP+PG+P+RT +  + HVNPGG AETR GAML+N+  AS PV  ++RL
Sbjct:   38 AAKFDCIKAAGVLDAPPAEVFELFIDNARAGEYNEFCRELRDVEFIDNATKVTWSASGRVGPFKERDFVTRVHYRSLPDGTLLVVNRAEDAPLTAASSDRYLRMEMYLGGSVLRPLPGNPNRTIYTTLAHVNPGGVAETRIGAMLMNAAAASGPVKLVQRL 198
[Close]
BLAST of mRNA_L-elsbetiae_contig9690.18662.1 vs. uniprot
Match: A0A7S4NFJ2_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NFJ2_GUITH)

HSP 1 Score: 183 bits (465), Expect = 1.180e-49
Identity = 88/163 (53.99%), Postives = 114/163 (69.94%), Query Frame = 1 
Query: 1132 RFACVKATAIICVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSSRYVRSEILLAGNFMRPVPG-----DPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCASSPVTFIRRL 1605
            +F CV ++ I+  PPE VY  F DNSRV EYNE C++VKDLE L  ++KITW+ASGR+GPFK RDF T VH+RT SDG+L   +R  +HP AP + R++R EI++ GN +RP        D SRT   ++THVNPGG AETR G M++NS  AS P+ FI+ L
Sbjct:   58 KFFCVMSSGILDAPPEQVYTYFVDNSRVHEYNEFCKQVKDLEYLDANTKITWSASGRVGPFKERDFVTRVHYRTASDGSLIIANRAEKHPKAPETERFLRMEIMIGGNVLRPAREADGSLDHSRTNITVLTHVNPGGIAETRLGTMILNSAAASGPIKFIQGL 220
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9690.18662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J623_9PHAE1.450e-15557.14START domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LLJ0_ECTSI1.830e-15556.42START domain-containing protein (Fragment) n=1 Tax... [more]
A0A7S2V5A8_9STRA6.200e-5757.83Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
I2CRQ3_NANGC1.050e-5660.42Lipid transfer protein 5-like protein (Fragment) n... [more]
A0A6U4ZLH7_HEMAN1.770e-5552.02Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S2RES9_9STRA6.920e-5455.15Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D8LAW9_ECTSI1.390e-5343.45START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JSI0_9PHAE4.310e-5353.71START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S0QTI7_9CRYP5.020e-5052.80Hypothetical protein (Fragment) n=2 Tax=Cryptomona... [more]
A0A7S4NFJ2_GUITH1.180e-4953.99Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9690contigL-elsbetiae_contig9690:638..5107 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score140.6
Seed ortholog evalue2.6e-30
Seed eggNOG ortholog2880.D7G2E9
KEGG koko:K10779
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.lipid binding
EggNOG OGsKOG2761@1,KOG2761@2759
EC3.6.4.12
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03000,ko03036
Ec32 ortholog descriptionSTART domain
Ec32 orthologEc-22_001140.1
Exons6
Model size1902
Cds size1902
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9690.18662.1prot_L-elsbetiae_contig9690.18662.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9690 638..5107 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817033.2727764-CDS-L-elsbetiae_contig9690:637..7051622817033.2727764-CDS-L-elsbetiae_contig9690:637..705Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9690 638..705 +
1691683996.9779327-CDS-L-elsbetiae_contig9690:637..7051691683996.9779327-CDS-L-elsbetiae_contig9690:637..705Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9690 638..705 +
1622817033.2847288-CDS-L-elsbetiae_contig9690:762..12201622817033.2847288-CDS-L-elsbetiae_contig9690:762..1220Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9690 763..1220 +
1691683997.0000732-CDS-L-elsbetiae_contig9690:762..12201691683997.0000732-CDS-L-elsbetiae_contig9690:762..1220Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9690 763..1220 +
1622817033.2955878-CDS-L-elsbetiae_contig9690:1313..21041622817033.2955878-CDS-L-elsbetiae_contig9690:1313..2104Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9690 1314..2104 +
1691683997.011526-CDS-L-elsbetiae_contig9690:1313..21041691683997.011526-CDS-L-elsbetiae_contig9690:1313..2104Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9690 1314..2104 +
1622817033.306839-CDS-L-elsbetiae_contig9690:2847..29781622817033.306839-CDS-L-elsbetiae_contig9690:2847..2978Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9690 2848..2978 +
1691683997.03027-CDS-L-elsbetiae_contig9690:2847..29781691683997.03027-CDS-L-elsbetiae_contig9690:2847..2978Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9690 2848..2978 +
1622817033.3191845-CDS-L-elsbetiae_contig9690:4175..42491622817033.3191845-CDS-L-elsbetiae_contig9690:4175..4249Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9690 4176..4249 +
1691683997.0448887-CDS-L-elsbetiae_contig9690:4175..42491691683997.0448887-CDS-L-elsbetiae_contig9690:4175..4249Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9690 4176..4249 +
1622817033.3296988-CDS-L-elsbetiae_contig9690:4727..51071622817033.3296988-CDS-L-elsbetiae_contig9690:4727..5107Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9690 4728..5107 +
1691683997.0564153-CDS-L-elsbetiae_contig9690:4727..51071691683997.0564153-CDS-L-elsbetiae_contig9690:4727..5107Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9690 4728..5107 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9690.18662.1

>prot_L-elsbetiae_contig9690.18662.1 ID=prot_L-elsbetiae_contig9690.18662.1|Name=mRNA_L-elsbetiae_contig9690.18662.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=634bp
MLRRGVAILAATLLLLKAYSSGSGERKDVNGDDPRHRQSNHRANRTRKSS
LAEDALSRYPQTGKFGPRHKTGVAVSSRDPCDEVERWEEEMEESWAETLA
ALAASGTALALQTVPESGRRQQHRRRRQRRRRPPDVSSAAAAVVERLQAE
LAATLDTLSSWRRRRRRRPRPWPRPTLAARQHLGQLTARLSGATAAAGQR
AGALLSAARESGDRGLRITGGYGELLRGRGHGLLLRSVEILRRGAAAAGG
QSREEEEEEEEEGEWEGSRLMRLTDMTVQNVVDVVARDGWEHVATTSGVV
VHRQYIALGADGTPLEETDAAAGAVAGAAAGAGEVRTTVEPSAVVVRGSS
SSISNDSSSSSSSSSSSSGSVGIDKAPRFACVKATAIICVPPEVVYLLFA
DNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFR
TLSDGTLAQVSRPVEHPAAPRSSRYVRSEILLAGNFMRPVPGDPSRTEFL
MVTHVNPGGAAETRAGAMLVNSLCASSPVTFIRRLEVAAQKLMVELQQQQ
QQQRPLLGSSPALAAGDGDGGGGRGGDSGGGGDNDDSGGGGGGGGGADVD
TDTGRGDGGTAAKEREGRRRASGEAIDERETLEE
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mRNA from alignment at L-elsbetiae_contig9690:638..5107+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9690.18662.1 ID=mRNA_L-elsbetiae_contig9690.18662.1|Name=mRNA_L-elsbetiae_contig9690.18662.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4470bp|location=Sequence derived from alignment at L-elsbetiae_contig9690:638..5107+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTTCGACGGGGTGTGGCCATCCTGGCCGCAACTCTACTCTTGTTGAA
GGCATACAGCTCTGGCTCGTCGGCTAGTCCCGAGCGCGGGCAACAACCAG
GCCTTCAACCCACAGCAAGACAGAGGGGCGAGCGCAAGGACGTTAACGGC
GACGACCCACGCCATCGGCAATCCAACCACCGTGCCAATAGAACAAGGAA
ATCCTCGCTGGCAGAAGACGCGCTAAGCCGCTACCCTCAGACAGGAAAGT
TTGGGCCGAGGCACAAGACCGGCGTGGCTGTCTCCTCCCGTGACCCTTGC
GACGAGGTCGAGAGGTGGGAAGAAGAGATGGAAGAGTCCTGGGCGGAAAC
TCTGGCAGCATTAGCCGCCTCCGGGACTGCGCTCGCCCTTCAGACGGTTC
CCGAAAGCGGGCGTCGGCAACAGCACCGGCGACGAAGACAGCGAAGAAGG
CGCCCCCCCGACGTATCCTCTGCCGCTGCCGCGGTGGTGGAACGACTGCA
AGCGGAGCTGGCGGCGACGCTTGACACCCTTTCCAGCTGGAGAAGACGAC
GGCGACGACGGCCGCGACCGTGGCCAAGACCAAGTCCTCATAGAGTGTCT
CCTCCGCCAGCAGCAGCAGTACGACGGCGCCGTTCGTGGCCTCCTTTTTC
TCCCCACCAAGCTTCGGCCGCGGCAGCGCTGGCCGCACGGCAGCACCTGG
GGCAGCTGACGGCGCGCCTCTCGGGGGCGACGGCCGCAGCTGGTCAGCGG
GCCGGAGCTCTCCTTTCAGCCGCCCGTGAGTCTGGCGACCGTGGCCTCCG
AATAACGGGGGGCTACGGGGAGCTGCTGCGCGGCCGAGGCCACGGGCTGC
TGCTCCGCAGCGTGGAAATACTTAGGCGCGGGGCCGCCGCCGCCGGGGGG
CAGTCGCGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGTGGGAAGG
CTCGCGATTGATGAGGCTGACCGACATGACGGTCCAGAACGTCGTCGATG
TTGTCGCGCGTGACGGGTGGGAGCACGTCGCGACGACAAGCGGCGTCGTG
GTGCACCGGCAGTACATTGCCCTGGGCGCCGACGGGACCCCCTTAGAGGA
GACAGACGCGGCGGCGGGGGCGGTGGCGGGGGCGGCGGCGGGGGCGGGTG
AGGTGCGCACGACAGTGGAACCTTCGGCAGTTGTTGTGAGAGGTAGTAGT
AGCAGCATTAGTAATGATAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAG
CAGTGGCAGTGTTGGGATCGACAAAGCACCGCGGTTCGCGTGCGTGAAGG
CCACGGCGATTATTTGCGTCCCGCCGGAGGTGGTGTACCTCCTGTTCGCA
GACAACTCGAGGGTGGGGGAATACAACGAGCACTGCCGCGAGGTGAAGGA
CCTGGAGGTGCTCTCGCAGGACAGCAAGATCACCTGGGCTGCGAGCGGGC
GCATGGGGCCCTTCAAGGTGCGGTGCGATTTCTCAGGTCTTTGGCGTCGT
CGGTGCCGTCGATGGTGCTCGTGTGTTTACAGGGGGGGGGGGGGGGGGGG
CGAGCGCGGGATAGGGTGATCCGCTCGTTGCGAGTGACGAGCGTGAAATC
AAATCAGGGCATAGGCGCCAAAGAATACCGACAGGGACGGAGGGGGAGTG
GCACACTTGCTGTGCCAGGTAGTGGTAATAGGCAAGTGGTGAGGATGTGT
TCCGGCTCGTTTTGCTTTTTTTGAAGTTGACTCTGTCGGCTCTTCTCTTT
GTTGCGTTTGAGACGGTCCTGCGGCGTCGAAAGTGGCCGGCATCGCGTAC
GGAAGAGATTGGGGGGGGGGGGGATGTGACTGTTGATTCGTGTTTTTTCC
CGCCGCGACCCTGGATACTCCGTACATTGCAAGAAAGGCGGCCTGATTAC
CCCCGCGCTCGGCACACGTGTAAATACCACGCGCGTACAGAAGCGTTCGC
CCTCCTTCTCGCCCTCTATATTGCCCTCTATATTTTAGCTCTCTCGCTTT
GGCCTCCGGCGTAATAATGACACCGCCGTTGCCGTGAGCCAAAAAAGGAA
ACACAAAAACTGTAAGAACAACTTGCTGCTGTATGGCTGGCTGTATGATA
CGATTGATACTATGTTTTTATATGTAAACAAGCACACACACACACACACA
CACACACACACACACACCTTTGTACGCTACATACATACACCATGCGTGCC
CCCCGAGCAGGCTCGAGACTTTTGCACGCTGGTGCACTTCCGGACGCTCA
GCGACGGCACGCTGGCCCAGGTCTCTCGGCCGGTCGAGCACCCGGCGGCC
CCCCGCAGCAGCCGCTACGTCCGGAGCGAGATTCTCTTGGCGTGAGTGAG
ACAATATATGAGATAAGATAGGACACGATAGGATCAGATAGACCAGCCCG
ATGGGATGAAACTGGACTCGCTACACACCTACCGCGTAGCTGTCGGTGCT
GGCCCGCGTGAATATGTAGAATAGGTGGCCGCCGTATTGCGTTGACGCTC
CGCATGCCCTCTTAAAAAAACATATTTTGCGGTAGTATTTAGTGCTGTCC
CATCAATTTCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCGGCTGCGGCTGCGGCTGCGGCTGCTGCGGCCTTTGT
TGTGGCGCGCGGTGAAAGTCGATCCCGCCTTGGGTTTTCCCGAAATACCG
CCGTGTTGATACGGCGACCTCAAGCCAAGAAGATAGGCTTTTTTGCTTGT
CGCCCTCCCCCCGCCGCCGAGTTTCCCGCTGGTGACCTACCTCCTTTTGC
GGCGCCGCTCTCCTCTCCTTGTGGCGGTTTGTCGAAGTTGTGCCGCGCGC
GCGCACCTCGATCACAAGTCTATATTTCTTCGAGGCCAGAATAGAAGTAG
GATCACGCACATGAAGCGTAAGAACAGTTGCGAACCGGCCGCGTTATCTC
TCTTGCGCCGCTAGTTGTCGTCACTGGATCAAATCAACCCATCCCTGCAT
GTGTCGGTGCCCGTTCACCCCCCCGCTGCGTGCCCCCTCTACAAGTTTGC
TGGATATCATACCATACATTGAAACGCAAGCACACCGGCAACGCACGCGC
CCCGTTATTGTTTTGAAAATAAAAAATGAGCGAATCAAAGACAAAACCTC
CCCCATGTTAGAGGCGGGACTTTGGGGATATAAACGGTTTTATTCCATAT
AAAAATACTGACGTCCATGGTTTTTAGTTTTAGCACTTGTCCGGCCGAGT
CGAAAGACGCCCTTTACTACTGTATGGTAGAGAGTTATTTTATAGTCATC
TGCCAGGTCAACCAACTGCATTGCGCTCTTTTGGTTTGATTTAAGAGAGT
GCTCCACAAAATGTCAGCGGTTTCAAGTCCCACCCAACCTATGTACGGAA
AATATCGTTTCAGGGAGACCGTTGAAAACACACCAACCCCCCTCACTGCT
GTCCCCCAGACTATTGCTGCGGTGGGAACAACACCCGCCGTTCGTTTTGG
TGTTCATTTCCTTCTTTTTCTTTCTTGTGGCCACGCAGCGGGAATTTCAT
GCGACCTGTTCCCGGGGACCCATCAAGGACCGAGTTTTTGATGGTGACGC
ACGTTAACCCAGGTAAGAAGTCTCCCTTGCCGGCCTCGCTTAGTTACTAC
TCTGCCTCTGTTCGGTGGCAGTTACGATACTTCTCTTCCCTATTTGCTGA
TTCCTCTCTCTCTGTATCTATCTCTCTTTCTCGCGTTATATCGGCATGAA
TCTATGTATTTGTGTGTGTATGTATGTATGTGTGTGCAATGACCTGTTGT
CTCTCTCTTGAGACCGTGAAAATATCAAGAACATGCATACATGGCACATA
ACCAGGTCCCCCCCCCCCCTACCCCAAGTATCCTGAGAACTGCTATCTAT
CAGTTACATACATATGGATGCACGACTGAAGGAACCTACACCGTCGTGGC
TCCACCGCACCACCCCGCGCGCCCGGCGCTCCCGGTACGAAAGAACCCGC
AGCGCTCAACACACAAACACACCACCATCCACGTGTGCGGCACAATGTTT
TTCACTATCCACCCCCCCCACCCACGCACCCACGCACCAGGGGGTGCCGC
GGAGACACGGGCCGGCGCGATGCTAGTTAACTCCCTCTGCGCAAGCTCCC
CGGTGACGTTCATCCGGAGGTTGGAAGTGGCGGCGCAGAAGCTGATGGTC
GAATTGCAGCAGCAGCAGCAGCAGCAGCGGCCGCTGCTTGGGTCCTCCCC
CGCCCTCGCCGCGGGAGACGGTGACGGCGGCGGCGGTCGTGGCGGCGATA
GCGGCGGCGGCGGTGACAACGACGATAGCGGCGGCGGCGGCGGCGGCGGT
GGTGGCGCCGATGTAGATACAGATACCGGCCGCGGCGACGGCGGCACGGC
GGCCAAGGAACGAGAGGGGAGACGAAGGGCATCAGGAGAAGCGATAGACG
AGCGAGAAACTTTAGAGGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9690:638..5107+

>mRNA_L-elsbetiae_contig9690.18662.1 ID=mRNA_L-elsbetiae_contig9690.18662.1|Name=mRNA_L-elsbetiae_contig9690.18662.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3804bp|location=Sequence derived from alignment at L-elsbetiae_contig9690:638..5107+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTTCGACGGGGTGTGGCCATCCTGGCCGCAACTCTACTCTTGTTGAA
GGCATACAGCTCTGGCTCATGCTTCGACGGGGTGTGGCCATCCTGGCCGC
AACTCTACTCTTGTTGAAGGCATACAGCTCTGGCTCGGGCGAGCGCAAGG
ACGTTAACGGCGACGACCCACGCCATCGGCAATCCAACCACCGTGCCAAT
AGAACAAGGAAATCCTCGCTGGCAGAAGACGCGCTAAGCCGCTACCCTCA
GACAGGAAAGTTTGGGCCGAGGCACAAGACCGGCGTGGCTGTCTCCTCCC
GTGACCCTTGCGACGAGGTCGAGAGGTGGGAAGAAGAGATGGAAGAGTCC
TGGGCGGAAACTCTGGCAGCATTAGCCGCCTCCGGGACTGCGCTCGCCCT
TCAGACGGTTCCCGAAAGCGGGCGTCGGCAACAGCACCGGCGACGAAGAC
AGCGAAGAAGGCGCCCCCCCGACGTATCCTCTGCCGCTGCCGCGGTGGTG
GAACGACTGCAAGCGGAGCTGGCGGCGACGCTTGACACCCTTTCCAGCTG
GAGAAGACGACGGCGACGACGGCCGCGACCGTGGCCAAGACCAAGGGCGA
GCGCAAGGACGTTAACGGCGACGACCCACGCCATCGGCAATCCAACCACC
GTGCCAATAGAACAAGGAAATCCTCGCTGGCAGAAGACGCGCTAAGCCGC
TACCCTCAGACAGGAAAGTTTGGGCCGAGGCACAAGACCGGCGTGGCTGT
CTCCTCCCGTGACCCTTGCGACGAGGTCGAGAGGTGGGAAGAAGAGATGG
AAGAGTCCTGGGCGGAAACTCTGGCAGCATTAGCCGCCTCCGGGACTGCG
CTCGCCCTTCAGACGGTTCCCGAAAGCGGGCGTCGGCAACAGCACCGGCG
ACGAAGACAGCGAAGAAGGCGCCCCCCCGACGTATCCTCTGCCGCTGCCG
CGGTGGTGGAACGACTGCAAGCGGAGCTGGCGGCGACGCTTGACACCCTT
TCCAGCTGGAGAAGACGACGGCGACGACGGCCGCGACCGTGGCCAAGACC
AACGCTGGCCGCACGGCAGCACCTGGGGCAGCTGACGGCGCGCCTCTCGG
GGGCGACGGCCGCAGCTGGTCAGCGGGCCGGAGCTCTCCTTTCAGCCGCC
CGTGAGTCTGGCGACCGTGGCCTCCGAATAACGGGGGGCTACGGGGAGCT
GCTGCGCGGCCGAGGCCACGGGCTGCTGCTCCGCAGCGTGGAAATACTTA
GGCGCGGGGCCGCCGCCGCCGGGGGGCAGTCGCGGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGGGGAGTGGGAAGGCTCGCGATTGATGAGGCTGACCGA
CATGACGGTCCAGAACGTCGTCGATGTTGTCGCGCGTGACGGGTGGGAGC
ACGTCGCGACGACAAGCGGCGTCGTGGTGCACCGGCAGTACATTGCCCTG
GGCGCCGACGGGACCCCCTTAGAGGAGACAGACGCGGCGGCGGGGGCGGT
GGCGGGGGCGGCGGCGGGGGCGGGTGAGGTGCGCACGACAGTGGAACCTT
CGGCAGTTGTTGTGAGAGGTAGTAGTAGCAGCATTAGTAATGATAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGTAGCAGTGGCAGTGTTGGGATCGACAA
AGCACCGCGGTTCGCGTGCGTGAAGGCCACGGCGATTATTTGCGTCCCGC
CGGAGGTGGTGTACCTCCTGTTCGCAGACAACTCGAGGGTGGGGGAATAC
AACGAGCACTGCCGCGAGGTGAAGGACCTGGAGGTGCTCTCGCAGGACAG
CAAGATCACCTGGGCTGCGAGCGGGCGCATGGGGCCCTTCAAGCGCTGGC
CGCACGGCAGCACCTGGGGCAGCTGACGGCGCGCCTCTCGGGGGCGACGG
CCGCAGCTGGTCAGCGGGCCGGAGCTCTCCTTTCAGCCGCCCGTGAGTCT
GGCGACCGTGGCCTCCGAATAACGGGGGGCTACGGGGAGCTGCTGCGCGG
CCGAGGCCACGGGCTGCTGCTCCGCAGCGTGGAAATACTTAGGCGCGGGG
CCGCCGCCGCCGGGGGGCAGTCGCGGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGGGGAGTGGGAAGGCTCGCGATTGATGAGGCTGACCGACATGACGGT
CCAGAACGTCGTCGATGTTGTCGCGCGTGACGGGTGGGAGCACGTCGCGA
CGACAAGCGGCGTCGTGGTGCACCGGCAGTACATTGCCCTGGGCGCCGAC
GGGACCCCCTTAGAGGAGACAGACGCGGCGGCGGGGGCGGTGGCGGGGGC
GGCGGCGGGGGCGGGTGAGGTGCGCACGACAGTGGAACCTTCGGCAGTTG
TTGTGAGAGGTAGTAGTAGCAGCATTAGTAATGATAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGTAGCAGTGGCAGTGTTGGGATCGACAAAGCACCGCG
GTTCGCGTGCGTGAAGGCCACGGCGATTATTTGCGTCCCGCCGGAGGTGG
TGTACCTCCTGTTCGCAGACAACTCGAGGGTGGGGGAATACAACGAGCAC
TGCCGCGAGGTGAAGGACCTGGAGGTGCTCTCGCAGGACAGCAAGATCAC
CTGGGCTGCGAGCGGGCGCATGGGGCCCTTCAAGGCTCGAGACTTTTGCA
CGCTGGTGCACTTCCGGACGCTCAGCGACGGCACGCTGGCCCAGGTCTCT
CGGCCGGTCGAGCACCCGGCGGCCCCCCGCAGCAGCCGCTACGTCCGGAG
CGAGATTCTCTTGGCGCTCGAGACTTTTGCACGCTGGTGCACTTCCGGAC
GCTCAGCGACGGCACGCTGGCCCAGGTCTCTCGGCCGGTCGAGCACCCGG
CGGCCCCCCGCAGCAGCCGCTACGTCCGGAGCGAGATTCTCTTGGCCGGG
AATTTCATGCGACCTGTTCCCGGGGACCCATCAAGGACCGAGTTTTTGAT
GGTGACGCACGTTAACCCAGCGGGAATTTCATGCGACCTGTTCCCGGGGA
CCCATCAAGGACCGAGTTTTTGATGGTGACGCACGTTAACCCAGGGGGTG
CCGCGGAGACACGGGCCGGCGCGATGCTAGTTAACTCCCTCTGCGCAAGC
TCCCCGGTGACGTTCATCCGGAGGTTGGAAGTGGCGGCGCAGAAGCTGAT
GGTCGAATTGCAGCAGCAGCAGCAGCAGCAGCGGCCGCTGCTTGGGTCCT
CCCCCGCCCTCGCCGCGGGAGACGGTGACGGCGGCGGCGGTCGTGGCGGC
GATAGCGGCGGCGGCGGTGACAACGACGATAGCGGCGGCGGCGGCGGCGG
CGGTGGTGGCGCCGATGTAGATACAGATACCGGCCGCGGCGACGGCGGCA
CGGCGGCCAAGGAACGAGAGGGGAGACGAAGGGCATCAGGAGAAGCGATA
GACGAGCGAGAAACTTTAGAGGAGGGGGTGCCGCGGAGACACGGGCCGGC
GCGATGCTAGTTAACTCCCTCTGCGCAAGCTCCCCGGTGACGTTCATCCG
GAGGTTGGAAGTGGCGGCGCAGAAGCTGATGGTCGAATTGCAGCAGCAGC
AGCAGCAGCAGCGGCCGCTGCTTGGGTCCTCCCCCGCCCTCGCCGCGGGA
GACGGTGACGGCGGCGGCGGTCGTGGCGGCGATAGCGGCGGCGGCGGTGA
CAACGACGATAGCGGCGGCGGCGGCGGCGGCGGTGGTGGCGCCGATGTAG
ATACAGATACCGGCCGCGGCGACGGCGGCACGGCGGCCAAGGAACGAGAG
GGGAGACGAAGGGCATCAGGAGAAGCGATAGACGAGCGAGAAACTTTAGA
GGAG
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