mRNA_L-elsbetiae_contig9686.18657.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9686.18657.1 vs. uniprot
Match: A0A830CCS8_9LAMI (Myb-related protein 3r-1 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830CCS8_9LAMI) HSP 1 Score: 65.1 bits (157), Expect = 3.480e-10 Identity = 31/95 (32.63%), Postives = 54/95 (56.84%), Query Frame = 3 Query: 18 ELRKGRWHRYEDDMLIEAMYYQAQGLPPELICWKNIASDVPGRIAYQCRNRWQGYLSPGLNTTPWLDEEMELLERAQGYFGGDRQWM-VELVFPG 299 +L KG W + ED +L++ + Q++ + + W IA+ +PGR+ QCR RW +L+P +N + W EE ++L A +G +W + + PG Sbjct: 125 DLVKGPWSKEEDKLLVKLVEKQSE----KKMKWAEIATQLPGRMGKQCRERWHNHLNPEINKSAWTIEEEKVLINAHSVYGN--KWSEIAKILPG 213
BLAST of mRNA_L-elsbetiae_contig9686.18657.1 vs. uniprot
Match: A0A5N6NFH3_9ASTR (Uncharacterized protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NFH3_9ASTR) HSP 1 Score: 60.5 bits (145), Expect = 1.070e-8 Identity = 27/70 (38.57%), Postives = 40/70 (57.14%), Query Frame = 3 Query: 27 KGRWHRYEDDMLIEAMYYQAQGLPPELICWKNIASDVPGRIAYQCRNRWQGYLSPGLNTTPWLDEEMELL 236 KG+W+ ED +L++ + W IA+ +PGRIA QCR+RWQ +L P + W +EE +LL Sbjct: 56 KGQWNSQEDGLLVQLVKEHGDSK------WSRIAAKLPGRIAKQCRDRWQNHLRPDITKDAWSEEEDKLL 119
BLAST of mRNA_L-elsbetiae_contig9686.18657.1 vs. uniprot
Match: A0A8K1FB42_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FB42_PYTOL) HSP 1 Score: 60.5 bits (145), Expect = 1.500e-8 Identity = 31/94 (32.98%), Postives = 50/94 (53.19%), Query Frame = 3 Query: 21 LRKGRWHRYEDDMLIEAMYYQAQGLPPELICWKNIASDVPGRIAYQCRNRWQGYLSPGLNTTPWLDEEMELLERAQGYFGGDRQW-MVELVFPG 299 L KG W +E+D+ ++ M Q W +A+ +PGR A QCR RW+ +L P +N P+ EE ++++A Y D +W + + PG Sbjct: 88 LVKGHWG-HEEDLALQEMVLQG------CHSWSEVAAQIPGRTAKQCRERWRNHLDPSINRAPFTPEEDNIIQQA--YERLDNRWTQIAELLPG 172
BLAST of mRNA_L-elsbetiae_contig9686.18657.1 vs. uniprot
Match: A0A383WD91_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WD91_TETOB) HSP 1 Score: 60.1 bits (144), Expect = 2.210e-8 Identity = 34/86 (39.53%), Postives = 44/86 (51.16%), Query Frame = 3 Query: 18 ELRKGRWHRYEDDMLIEAMYYQAQGLPPELICWKNIASDVPGRIAYQCRNRWQGYLSPGLNTTPWLDEEMELLERAQGYFGGDRQW 275 EL KG W + ED ++IE + G W IAS++PGRI QCR RW +L+P +N + W EE E L G QW Sbjct: 96 ELIKGCWTKEEDRLIIELV--ATHGAKK----WSLIASNLPGRIGKQCRERWHNHLNPDINRSEWTREEDEQLVALHASIGN--QW 173
BLAST of mRNA_L-elsbetiae_contig9686.18657.1 vs. uniprot
Match: A0A2U1N189_ARTAN (Homeodomain-like protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1N189_ARTAN) HSP 1 Score: 59.3 bits (142), Expect = 2.820e-8 Identity = 27/70 (38.57%), Postives = 39/70 (55.71%), Query Frame = 3 Query: 27 KGRWHRYEDDMLIEAMYYQAQGLPPELICWKNIASDVPGRIAYQCRNRWQGYLSPGLNTTPWLDEEMELL 236 KG+W+ ED +L++ + W IA +PGRIA QCR+RWQ +L P + W +EE +LL Sbjct: 60 KGQWNSDEDRLLVQLVKQHGDSK------WSQIAEKLPGRIAKQCRDRWQNHLRPDITKDAWSEEEDKLL 123
BLAST of mRNA_L-elsbetiae_contig9686.18657.1 vs. uniprot
Match: A0A251TUZ6_HELAN (Putative homeodomain-like protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251TUZ6_HELAN) HSP 1 Score: 59.3 bits (142), Expect = 2.900e-8 Identity = 26/70 (37.14%), Postives = 39/70 (55.71%), Query Frame = 3 Query: 27 KGRWHRYEDDMLIEAMYYQAQGLPPELICWKNIASDVPGRIAYQCRNRWQGYLSPGLNTTPWLDEEMELL 236 KG+W+ ED +L++ + W +A +PGRIA QCR+RWQ +L P + W +EE +LL Sbjct: 56 KGQWNSQEDRLLVQLVKQYGDSK------WSRVAEKLPGRIAKQCRDRWQNHLRPDITKDAWSEEEDKLL 119
BLAST of mRNA_L-elsbetiae_contig9686.18657.1 vs. uniprot
Match: A0A7J7IRZ5_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IRZ5_9RHOD) HSP 1 Score: 59.7 bits (143), Expect = 2.930e-8 Identity = 30/91 (32.97%), Postives = 46/91 (50.55%), Query Frame = 3 Query: 27 KGRWHRYEDDMLIEAMYYQAQGLPPELICWKNIASDVPGRIAYQCRNRWQGYLSPGLNTTPWLDEEMELLERAQGYFGGDRQWMVELVFPG 299 KG W ED +IE + + W +A+ + GR QCR RW +L+PG+N +PW +EE ++L FG +R ++ PG Sbjct: 167 KGAWTAAEDARIIELVRQIGEK------SWSRLATFLEGRTGKQCRERWFHHLAPGVNKSPWTEEEEQVLREKHAEFG-NRWALIARYLPG 250
BLAST of mRNA_L-elsbetiae_contig9686.18657.1 vs. uniprot
Match: A0A2R5G948_9STRA (Transcription factor MYB98 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G948_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 3.470e-8 Identity = 35/91 (38.46%), Postives = 47/91 (51.65%), Query Frame = 3 Query: 27 KGRWHRYEDDMLIEAMYYQAQGLPPELICWKNIASDVPGRIAYQCRNRWQGYLSPGLNTTPWLDEEMELLERAQGYFGGDRQWMVELVFPG 299 KG W ED L + + + P+ WK IAS++PGRIA QCR RW +L PG+ PW EE + + A G M +L+ PG Sbjct: 225 KGTWTAEEDKQLCQLV----ERFGPKK--WKVIASELPGRIAKQCRERWCHHLCPGIRKGPWTKEEDKTIIAAHQRLGNRWAEMAKLL-PG 308
BLAST of mRNA_L-elsbetiae_contig9686.18657.1 vs. uniprot
Match: A0A168KEY8_MUCCL (Homeodomain-like DNA binding domain-containing transcription factor n=2 Tax=Mucor circinelloides f. lusitanicus TaxID=29924 RepID=A0A168KEY8_MUCCL) HSP 1 Score: 58.9 bits (141), Expect = 4.840e-8 Identity = 28/80 (35.00%), Postives = 40/80 (50.00%), Query Frame = 3 Query: 21 LRKGRWHRYEDDMLIEAMYYQAQGLPPELICWKNIASDVPGRIAYQCRNRWQGYLSPGLNTTPWLDEEMELLERAQGYFG 260 + KG+W +YED L EA++Y + W IA ++P R QC+ RW L P + W EE + LE A +G Sbjct: 70 VHKGKWSKYEDQALTEAVHYYQTITSSMALPWNRIAENIPHRTGIQCQARWTEALDPTVRKGRWHPEEDKQLEVAIAKYG 149
BLAST of mRNA_L-elsbetiae_contig9686.18657.1 vs. uniprot
Match: A0A6S7LCP3_LACSI (Uncharacterized protein n=2 Tax=Lactuca TaxID=4235 RepID=A0A6S7LCP3_LACSI) HSP 1 Score: 58.5 bits (140), Expect = 5.660e-8 Identity = 27/70 (38.57%), Postives = 39/70 (55.71%), Query Frame = 3 Query: 27 KGRWHRYEDDMLIEAMYYQAQGLPPELICWKNIASDVPGRIAYQCRNRWQGYLSPGLNTTPWLDEEMELL 236 KG+W+ ED +L++ + W IA +PGRIA QCR+RWQ +L P + W +EE +LL Sbjct: 64 KGQWNSDEDRLLVQLVTQHGDTK------WSKIAEKLPGRIAKQCRDRWQNHLRPDITKDAWSEEEDKLL 127 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9686.18657.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9686.18657.1 >prot_L-elsbetiae_contig9686.18657.1 ID=prot_L-elsbetiae_contig9686.18657.1|Name=mRNA_L-elsbetiae_contig9686.18657.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=96bp MVELRKGRWHRYEDDMLIEAMYYQAQGLPPELICWKNIASDVPGRIAYQCback to top mRNA from alignment at L-elsbetiae_contig9686:4737..5760+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9686.18657.1 ID=mRNA_L-elsbetiae_contig9686.18657.1|Name=mRNA_L-elsbetiae_contig9686.18657.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1024bp|location=Sequence derived from alignment at L-elsbetiae_contig9686:4737..5760+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9686:4737..5760+ >mRNA_L-elsbetiae_contig9686.18657.1 ID=mRNA_L-elsbetiae_contig9686.18657.1|Name=mRNA_L-elsbetiae_contig9686.18657.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=576bp|location=Sequence derived from alignment at L-elsbetiae_contig9686:4737..5760+ (Laminarionema elsbetiae ELsaHSoW15)back to top |