mRNA_L-elsbetiae_contig9681.18655.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9681.18655.1 vs. uniprot
Match: D7FWR0_ECTSI (Phosphoglycerate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR0_ECTSI) HSP 1 Score: 258 bits (658), Expect = 8.420e-77 Identity = 127/149 (85.23%), Postives = 139/149 (93.29%), Query Frame = 1 Query: 1 EDLVMSTADEYRERSEEYQLIQCAIPTHEKFSSDGYWVMSLRGFGDRRCNVGNIFSGLTCSINDRAPPPRAVRKPTGRPADATRIRTWRNSEALAARKRQLAPTLRELRPQRFRAEETGGLLVQGQDLLEWAAMSSREYFELRHLQESE 447 EDLVMSTADEYRERSEEYQLI AIPT+EKFSSDGYW+MSLRGFG+R CNVGNIFSGLTCSIND+ PPRAVRKPTGRPADATR RTWRNSEALAARKR+LAP LR LRPQ+F+ +ETGGL+VQG+DLLEWAA SSR+YF+LRHLQESE Sbjct: 305 EDLVMSTADEYRERSEEYQLIHSAIPTYEKFSSDGYWMMSLRGFGERSCNVGNIFSGLTCSINDQMAPPRAVRKPTGRPADATRKRTWRNSEALAARKRELAPVLRSLRPQQFQPDETGGLVVQGEDLLEWAAQSSRQYFQLRHLQESE 453
BLAST of mRNA_L-elsbetiae_contig9681.18655.1 vs. uniprot
Match: A0A6H5JLM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM7_9PHAE) HSP 1 Score: 137 bits (345), Expect = 1.580e-37 Identity = 66/88 (75.00%), Postives = 75/88 (85.23%), Query Frame = 1 Query: 112 VMSLRGFGDRRCNVGNIFSGLTCSINDRAPPPRAVRKPTGRPADATRIRTWRNSEALAARKRQLAPTLRELRPQRFRAEETGGLLVQG 375 +MSLRGFG+ CNVGNIFSGLTC IND+ PPRAVRKPTGRPADATR R+WRNSEALA RKR+LAP LR LRPQ+F+ +ETGG +G Sbjct: 1 MMSLRGFGEHSCNVGNIFSGLTCGINDQTAPPRAVRKPTGRPADATRKRSWRNSEALATRKRELAPVLRSLRPQQFQPDETGGEAERG 88
BLAST of mRNA_L-elsbetiae_contig9681.18655.1 vs. uniprot
Match: A0A7S2BBV4_9STRA (Phosphoglycerate kinase (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BBV4_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.720e-28 Identity = 66/146 (45.21%), Postives = 92/146 (63.01%), Query Frame = 1 Query: 7 LVMSTADEYRERSEEYQLIQCAIPTHEKFSSDGYWVMSLRGFGDRRCNVGNIFSGLTCSINDRAPPPRAVRKP----TG---RPADATRIRTWRNSEALAARKRQLAPTLRELRPQRFRAEETGGLLVQGQDLLEWAAMSSREYFE 423 ++MS ++E+RE++EEYQ+IQ AIP HE++ + YW MSLRG G R VGNIFSGL C + + P P+ +R+P TG RP R WRN L +RK++L + +R + E + GL+V Q+LLEWA SS+ YFE Sbjct: 73 MMMSDSNEFREKAEEYQVIQAAIPAHERYGAS-YWEMSLRGQGARFVPVGNIFSGLFCPLREVIPAPKMIRRPNLDGTGAATRPEAEQSSRNWRNDAFLQSRKQRLKKNIMTIRSHELKPELSAGLVVVSQNLLEWAKTSSQAYFE 217
BLAST of mRNA_L-elsbetiae_contig9681.18655.1 vs. uniprot
Match: A0A2R5GE93_9STRA (Adenylate cyclase type 10 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GE93_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.260e-23 Identity = 66/141 (46.81%), Postives = 83/141 (58.87%), Query Frame = 1 Query: 1 EDLVMSTADEYRERSEEYQLIQCAIPTHEKFSSDGYWVMSLRGFGDRRCNVGNIFSGLTCSINDRAPPP-RAVRKPTGRPADATRIR-----TWRNSEALAARKRQLAPTLRELRPQRFRAEETGGLLVQGQDLLEWAAMS 405 +DLV+S AD YRER EEY I AIP HEK S+ YW MSLRG G R VGNIFSGL C +N+ + + VR P R +WR+S L R+R LA LR+LRP E+ L+++G+ LLEWA +S Sbjct: 167 DDLVISRADSYRERMEEYNYISAAIPHHEKHGSE-YWKMSLRGLGTRYVAVGNIFSGLFCPVNESSKNEMQMVRIPRLHKNSQLARRGIDKPSWRDSPILQRRQRNLAGELRKLRPHLLTDEDADALVLRGEPLLEWAYVS 306
BLAST of mRNA_L-elsbetiae_contig9681.18655.1 vs. uniprot
Match: A0A7S3YB66_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YB66_HETAK) HSP 1 Score: 95.9 bits (237), Expect = 9.010e-22 Identity = 62/157 (39.49%), Postives = 85/157 (54.14%), Query Frame = 1 Query: 4 DLVMSTADEYRERSEEYQLIQCAIPTHEKFSSDGYWVMSLRGFGDRRCNVGNIFSGLTCSINDRAPPPRAVRKP-------------TGRPADATRIRTWRNSEALAARKRQLAPTLRELRP----QRFRAEETGGLLVQGQDLLEWAAMSSREYFE 423 D V+ ++ +RE+ EE IQ AIP EK++ +W M LR G R VGNIFSGL C + D P VR+P TG + ++TWR+S L A++R+L +RE+ P A GLLV+G+DLL+WA SS E+FE Sbjct: 51 DTVLVRSEGFREKVEELAAIQAAIPPQEKYAG-AFWEMGLRSQGQRYAQVGNIFSGLFCPLQDDRPVHFLVRRPGVALLGPSLVRTDTG---ELRPMKTWRDSAYLQAKQRRLGARIREVNPVPRVSELDAAAAEGLLVRGRDLLDWALESSAEHFE 203
BLAST of mRNA_L-elsbetiae_contig9681.18655.1 vs. uniprot
Match: A0A7S3ZYQ4_9STRA (Phosphoglycerate kinase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZYQ4_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 3.480e-17 Identity = 53/152 (34.87%), Postives = 82/152 (53.95%), Query Frame = 1 Query: 7 LVMSTADEYRERSEEYQLIQCAIPTHEKFSSDGYWVMSLRGFGDRRCNVGNIFSGLTCSINDRAPPPRAVRKPTGRPADATRIRT--------WRNSEALAARKRQLAPTLRELRPQRFRA-EETGGLLVQGQDLLEWAAMSSREYFELRHL 435 L+M + ++YRE+SE +Q+IQ +IP E + + YW M+LRG G R VGN+FSGL C + P+ +R+P P A + T WR+ + RK+Q L+ L+P + ++ L V G DL WAA +S + R++ Sbjct: 233 LMMKSCEDYREQSENFQIIQASIPQEES-AGESYWEMNLRGEGQRMVRVGNLFSGLYCPLKKGEKAPQQIRRPK-LPGSAAGLTTRSLGEKKDWRSDPYMLKRKKQWEKGLKTLQPHLVGSGDDATELAVVGTDLFRWAADASEDVLNARNV 382
BLAST of mRNA_L-elsbetiae_contig9681.18655.1 vs. uniprot
Match: A0A836CAG5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAG5_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 9.250e-13 Identity = 37/68 (54.41%), Postives = 48/68 (70.59%), Query Frame = 1 Query: 1 EDLVMSTADEYRERSEEYQLIQCAIPTHEKFSSDGYWVMSLRGFGDRRCNVGNIFSGLTCSINDRAPP 204 EDLVMSTADE+RER+E YQL+Q F S+ +W MSLRG G+R+ VGNIF+GL C++ + P Sbjct: 198 EDLVMSTADEFRERTEAYQLLQ--------FPSEVFWEMSLRGIGERQTAVGNIFTGLACNVKEGGVP 257
BLAST of mRNA_L-elsbetiae_contig9681.18655.1 vs. uniprot
Match: A0A5B8MNI0_9CHLO (MYCBP-associated protein n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MNI0_9CHLO) HSP 1 Score: 64.7 bits (156), Expect = 2.760e-9 Identity = 44/130 (33.85%), Postives = 63/130 (48.46%), Query Frame = 1 Query: 4 DLVMSTADEYRERSEEYQLIQCAIPTHEKFSSDGYWVMSLRGFGDRRCNVGNIFSGLTCSINDR---------APPPRAVRKPT-------------GRPADATRIRTWRNSEALAARKRQLAPTLRELR 327 DLV E+R + EE ++++ AIPTHE+ +D W MSLR R VGNIFSGL C + D+ P +V P+ G ATR R+W +S L R+ Q + + ++R Sbjct: 227 DLVFERGPEFRRKKEELEMLELAIPTHERHGAD-QWTMSLRNNWTRYVPVGNIFSGLFCPVEDKPTIEYLEQITKPIHSVDDPSKTAEQLKTLGKTFGSSTLATRGRSWLDSGYLQTRRTQYSKNIAKVR 355
BLAST of mRNA_L-elsbetiae_contig9681.18655.1 vs. uniprot
Match: A0A813A377_9DINO (Ssp2 protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813A377_9DINO) HSP 1 Score: 60.5 bits (145), Expect = 6.500e-8 Identity = 45/130 (34.62%), Postives = 67/130 (51.54%), Query Frame = 1 Query: 1 EDLVMSTADEYRERSEEYQLIQCAIPTHEKFSSDGY-WVMSLRGFGDRRCNVGNIFSGL--TCSINDRAPPPRAVRKP----------TGRPADATRIRTWRNSEALAARKRQLAPTLRELRPQRFRAEE 351 E+LV++ A+EYRER E +L+ A P E+ S G+ W SLRG G R VGN+FSGL ++ +RKP T + + R+WR+ E L AR R+ ++E+ P + +E Sbjct: 147 EELVVTRAEEYRERLEVMELLDRATP--EEIKSGGFNWYHSLRGEGTRFIQVGNMFSGLYLPMKLHKENFVHEIIRKPLLVDLTTARHTAEASGKKKPRSWRDDEYLLARIRKYGAKMKEMAPGQLEYDE 274
BLAST of mRNA_L-elsbetiae_contig9681.18655.1 vs. uniprot
Match: A0A812JL84_9DINO (Ssp2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812JL84_9DINO) HSP 1 Score: 60.5 bits (145), Expect = 7.820e-8 Identity = 45/130 (34.62%), Postives = 67/130 (51.54%), Query Frame = 1 Query: 1 EDLVMSTADEYRERSEEYQLIQCAIPTHEKFSSDGY-WVMSLRGFGDRRCNVGNIFSGL--TCSINDRAPPPRAVRKP----------TGRPADATRIRTWRNSEALAARKRQLAPTLRELRPQRFRAEE 351 E+LV++ A+EYRER E +L+ A P E+ S G+ W SLRG G R VGN+FSGL ++ +RKP T + + R+WR+ E L AR R+ ++E+ P + +E Sbjct: 428 EELVVTRAEEYRERLEVMELLDRATP--EEIKSGGFNWYHSLRGEGTRFIQVGNMFSGLYLPMKLHKENFVHEIIRKPLLVDLTTARHTAEASGKKKPRSWRDDEYLLARIRKYGAKMKEMAPGQLEYDE 555 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9681.18655.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9681.18655.1 >prot_L-elsbetiae_contig9681.18655.1 ID=prot_L-elsbetiae_contig9681.18655.1|Name=mRNA_L-elsbetiae_contig9681.18655.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=145bp MSTADEYRERSEEYQLIQCAIPTHEKFSSDGYWVMSLRGFGDRRCNVGNIback to top mRNA from alignment at L-elsbetiae_contig9681:5269..6363+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9681.18655.1 ID=mRNA_L-elsbetiae_contig9681.18655.1|Name=mRNA_L-elsbetiae_contig9681.18655.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1095bp|location=Sequence derived from alignment at L-elsbetiae_contig9681:5269..6363+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9681:5269..6363+ >mRNA_L-elsbetiae_contig9681.18655.1 ID=mRNA_L-elsbetiae_contig9681.18655.1|Name=mRNA_L-elsbetiae_contig9681.18655.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=870bp|location=Sequence derived from alignment at L-elsbetiae_contig9681:5269..6363+ (Laminarionema elsbetiae ELsaHSoW15)back to top |