mRNA_L-elsbetiae_contig9670.18647.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9670.18647.1 vs. uniprot
Match: D7FT33_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT33_ECTSI) HSP 1 Score: 148 bits (373), Expect = 3.370e-40 Identity = 72/77 (93.51%), Postives = 75/77 (97.40%), Query Frame = 1 Query: 1 MPRTITIDLIRRKAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLAL 231 MP ITIDLIRR+AEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIG+M+NLHHMKELEYLNLAL Sbjct: 1 MPNKITIDLIRRRAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGKMQNLHHMKELEYLNLAL 77
BLAST of mRNA_L-elsbetiae_contig9670.18647.1 vs. uniprot
Match: A0A835Z7F5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7F5_9STRA) HSP 1 Score: 129 bits (325), Expect = 2.870e-34 Identity = 61/81 (75.31%), Postives = 72/81 (88.89%), Query Frame = 1 Query: 1 MPRTITIDLIRRKAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNIA 243 M I+++L+RR+AEHNEGLIHTLEE+SLHQEE+E I+D LG NCR LKILYLQNNII +M+NLHH+KELEYLNLALNNI Sbjct: 1 MAPVISLELVRRRAEHNEGLIHTLEEISLHQEEIERINDVLGKNCRHLKILYLQNNIINKMENLHHLKELEYLNLALNNIT 81
BLAST of mRNA_L-elsbetiae_contig9670.18647.1 vs. uniprot
Match: A0A7S2CFI3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CFI3_9STRA) HSP 1 Score: 115 bits (287), Expect = 9.880e-31 Identity = 55/76 (72.37%), Postives = 67/76 (88.16%), Query Frame = 1 Query: 13 ITIDLIRRKAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNI 240 +T LIR++AEHNEG+I +LEE+SLHQEELE I + LG CR+LKI+YLQNNII +M+NLHH+KELEYLNLALNNI Sbjct: 4 LTRALIRKRAEHNEGIISSLEEISLHQEELEGIREVLGTTCRKLKIVYLQNNIIPKMENLHHLKELEYLNLALNNI 79
BLAST of mRNA_L-elsbetiae_contig9670.18647.1 vs. uniprot
Match: A0A7S3HTQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTQ6_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.670e-30 Identity = 57/79 (72.15%), Postives = 70/79 (88.61%), Query Frame = 1 Query: 13 ITIDLIRRKAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNIAKV 249 IT DL+R++AEHNEG+I TLEE+SLHQEELESI++ LG CR+LKILYLQNNII +M+NL HMK+L YLNLALNN+ K+ Sbjct: 28 ITRDLLRKRAEHNEGMISTLEEISLHQEELESINEVLGMTCRKLKILYLQNNIISKMENLFHMKDLVYLNLALNNVTKI 106
BLAST of mRNA_L-elsbetiae_contig9670.18647.1 vs. uniprot
Match: A0A6A3PUF8_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3PUF8_9STRA) HSP 1 Score: 107 bits (268), Expect = 5.100e-29 Identity = 54/80 (67.50%), Postives = 70/80 (87.50%), Query Frame = 1 Query: 1 MPRTITIDLIRRKAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNI 240 MPR IT++L+R++AEHNEG+I +LEE+SLHQEELE I+ +G CR+L+ILYLQNNII +M++L HMKEL YLN+ALNNI Sbjct: 1 MPR-ITVELLRKRAEHNEGIISSLEEISLHQEELEKIE-VIGTLCRKLRILYLQNNIIDKMEDLTHMKELRYLNVALNNI 78
BLAST of mRNA_L-elsbetiae_contig9670.18647.1 vs. uniprot
Match: A0A7S4E455_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E455_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.320e-28 Identity = 52/79 (65.82%), Postives = 71/79 (89.87%), Query Frame = 1 Query: 13 ITIDLIRRKAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNIAKV 249 +T+ LIR++AEHNEG+I TLEEL+LHQEEL +I+ LG CR+LKILYLQNNII ++++LHH+K+LEYLN+ALNN++K+ Sbjct: 27 MTLKLIRKRAEHNEGIISTLEELTLHQEELVAIEPCLGTTCRKLKILYLQNNIISKIQHLHHLKDLEYLNMALNNVSKI 105
BLAST of mRNA_L-elsbetiae_contig9670.18647.1 vs. uniprot
Match: A0A6A5AU65_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AU65_9STRA) HSP 1 Score: 106 bits (265), Expect = 3.350e-28 Identity = 51/83 (61.45%), Postives = 72/83 (86.75%), Query Frame = 1 Query: 1 MPRTITIDLIRRKAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNIAKV 249 MPR IT++L+R+++EHNEG++ TLEE++LHQEE+E I+ +G CR+L+ILYLQNNII ++++L HMK+L YLNLALNNI K+ Sbjct: 4 MPR-ITLELLRKRSEHNEGMVSTLEEIALHQEEIEKIE-VIGTLCRKLRILYLQNNIIEKIEDLTHMKDLRYLNLALNNIKKI 84
BLAST of mRNA_L-elsbetiae_contig9670.18647.1 vs. uniprot
Match: A0A662WUB0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUB0_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.040e-27 Identity = 57/83 (68.67%), Postives = 73/83 (87.95%), Query Frame = 1 Query: 1 MPRTITIDLIRRKAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNIAKV 249 MPR IT++L+R++AEHNEG+I TLEE+SLHQEELE I+ +G CR+L+ILYLQNNII +M++L HMKEL YLNLALNNI+K+ Sbjct: 1 MPR-ITVELLRKRAEHNEGIISTLEEISLHQEELEKIE-VIGTLCRKLQILYLQNNIIEKMEDLTHMKELRYLNLALNNISKI 81
BLAST of mRNA_L-elsbetiae_contig9670.18647.1 vs. uniprot
Match: W7TJA0_9STRA (Leucine-rich repeat containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJA0_9STRA) HSP 1 Score: 112 bits (281), Expect = 2.170e-27 Identity = 53/79 (67.09%), Postives = 68/79 (86.08%), Query Frame = 1 Query: 13 ITIDLIRRKAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNIAKV 249 IT DL+R++AEHNEG++ TLEEL+LHQEELE I+D LG CR +KILYLQNN++ ++NLHH+K LEYLN+ALNNI+ V Sbjct: 4 ITRDLLRKRAEHNEGILTTLEELALHQEELEGINDILGKTCREIKILYLQNNLLPRIENLHHLKCLEYLNVALNNISVV 82
BLAST of mRNA_L-elsbetiae_contig9670.18647.1 vs. uniprot
Match: F0YAK5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAK5_AURAN) HSP 1 Score: 107 bits (266), Expect = 4.690e-26 Identity = 53/72 (73.61%), Postives = 63/72 (87.50%), Query Frame = 1 Query: 13 ITIDLIRRKAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLA 228 IT +LIR++AEHNEG+I TLEEL+LHQEEL +I LG CR+LKILYLQNNII +M+NLHHMK+LEYLNLA Sbjct: 1 ITRELIRKRAEHNEGVISTLEELTLHQEELLAIAPCLGTICRKLKILYLQNNIISKMENLHHMKDLEYLNLA 72 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9670.18647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9670.18647.1 >prot_L-elsbetiae_contig9670.18647.1 ID=prot_L-elsbetiae_contig9670.18647.1|Name=mRNA_L-elsbetiae_contig9670.18647.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=83bp MPRTITIDLIRRKAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKIback to top mRNA from alignment at L-elsbetiae_contig9670:6251..7300+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9670.18647.1 ID=mRNA_L-elsbetiae_contig9670.18647.1|Name=mRNA_L-elsbetiae_contig9670.18647.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1050bp|location=Sequence derived from alignment at L-elsbetiae_contig9670:6251..7300+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9670:6251..7300+ >mRNA_L-elsbetiae_contig9670.18647.1 ID=mRNA_L-elsbetiae_contig9670.18647.1|Name=mRNA_L-elsbetiae_contig9670.18647.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=498bp|location=Sequence derived from alignment at L-elsbetiae_contig9670:6251..7300+ (Laminarionema elsbetiae ELsaHSoW15)back to top |