mRNA_L-elsbetiae_contig9654.18633.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9654.18633.1 vs. uniprot
Match: D7FQD7_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQD7_ECTSI) HSP 1 Score: 404 bits (1039), Expect = 2.520e-136 Identity = 210/262 (80.15%), Postives = 233/262 (88.93%), Query Frame = 1 Query: 28 PAVGRERSIALRNQHARPATPNGGRHVMMVAGVGSVST-ADVDESTLIKNSLLQVAAMTERGQLATEAQRNDMDTLVERLEDLKASGQLGPFEDENMIGIWTLVYSSSQAFRSSPFFATFQALLGGEGVAQKIFSLTDAFPNAKIGQARQIINEGCTELLSRVEMSVWPHRWISGVVETRSKVVNDDIGDRLELIVDDTRVSDSILGKISPRLEELRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDKNFLIYVKDY 810 P +G RSI N+H R + G+HV+ + SV T ADVDE TLIKNSLLQVAAMTERGQLATEAQ+NDMD L+ERLE+LKA L P++DENM+G WTLVYSSSQAFRSSPFFATFQAL+G +GVA++IFS TDAFPNAKIGQARQI+NE CTELLSRVEMSVWPHRWISGVVETRSK+VNDDIGD+LE+IVDDTRVSDSILGKISPRLEE+RVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPD+NFL+YVKDY Sbjct: 23 PGMGSGRSITAGNRHTRHFSCCDGKHVLTTR-MSSVGTPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMVGTWTLVYSSSQAFRSSPFFATFQALIGKDGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHRWISGVVETRSKIVNDDIGDQLEVIVDDTRVSDSILGKISPRLEEVRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLVYVKDY 283
BLAST of mRNA_L-elsbetiae_contig9654.18633.1 vs. uniprot
Match: A0A835ZIJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIJ0_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.340e-41 Identity = 85/198 (42.93%), Postives = 127/198 (64.14%), Query Frame = 1 Query: 229 QRNDMDTLVERLEDLKASGQLGPFEDENMIGIWTLVYSSSQAFRSSPFFATFQALLGGEGVAQKIFSLTDAFPNAKIGQARQII----NEGCTELLSRVEMSVWPHRWISGVVETRSKVVNDDIGDRLELIVDDTRVSDSILGKISP-RLEELRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDKNFLIYVKD 807 QR+D++ LV RL++L + + PF ++M+G WTLVYSS + FR P FA QAL G +++ + A P A++G +Q I EG + + + V+P ++ G +ET +++VNDDIGD LE+IV+ + V++S L + P + VPV +LSER FDR+PR+ L+T++LD D RV+RLPD LIYVKD Sbjct: 2 QRDDVELLVTRLQELVPAEE--PFNGDDMLGSWTLVYSSGEVFRGDPVFAHIQALAGNPLWPNRVYRMAGAMPTARVGTVQQTIAAGGEEGRCKRCLVIRLEVFPWNYLQGTIETEARIVNDDIGDGLEVIVERSAVTESPLTRFWPGKNGPPAVPVARLSERFFDRLPRLALETLYLDSDFRVTRLPDDTLLIYVKD 197
BLAST of mRNA_L-elsbetiae_contig9654.18633.1 vs. uniprot
Match: A0A7S0WSZ6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WSZ6_9CHLO) HSP 1 Score: 108 bits (269), Expect = 6.210e-23 Identity = 86/228 (37.72%), Postives = 125/228 (54.82%), Query Frame = 1 Query: 130 SVSTADVDESTLIKNSLLQVAAMTERGQLATEAQRNDMDTLVERLEDLKASGQLGPFEDENMIGIWTLVYSSSQAFRSSPFFATFQ-ALLGGEGVAQKIFSLTDAFPNAKIGQARQIINEGCTELLSRVEMSVWPHRWISGVVETRSKVVNDDIGDRLELIVDDTRVSDSILGKISPRLEELRVPVDQLSERLFDR-IPRITLDTVFLDQDLRVSRL-PDKNFLIYVK 804 +VS+ VD +K LL+ A +RGQ+ATE+Q+ +++ ++ +LE +A E + G W LVY+S +AFRSSPFF FQ L+G E +A IF TDA P A +GQA Q + E +S V++ V+P G V T S V L L V++TRV+ S L + L+ + VPV + E + R ++ D FLD +LRV+R PD +Y K Sbjct: 29 NVSSVAVDSD--LKKVLLRHVAGIDRGQVATESQKQEIEMVISQLEASQAPMSEQLEVQEALQGKWQLVYTSVEAFRSSPFFWAFQEGLVGSEELASAIFKFTDAIPGATVGQAFQTFDFNTGECVSEVDLEVFPGA--KGCVVTTSTVRCSTPPTCLVLTVENTRVARSNL--LPFLLDSVVVPVKDVVEAVRGRGKTAVSADMTFLDGELRVARTRPDGAIFVYRK 250
BLAST of mRNA_L-elsbetiae_contig9654.18633.1 vs. uniprot
Match: A0A7R9UZ95_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9UZ95_9CHLO) HSP 1 Score: 94.4 bits (233), Expect = 1.210e-18 Identity = 70/168 (41.67%), Postives = 92/168 (54.76%), Query Frame = 1 Query: 319 GIWTLVYSSSQAFRSSPFFATFQA--LLGGEGVAQKIFSLTDAFPNAKIGQARQIINEGCTELLSRVEMSVWPHRWI---SGVVETRSKVVNDDIGDRLELIVDDTRVSDS-ILGKISPRLEELRVPVDQLSERLFDR-IPRITLDTVFLDQDLRVSR-LPDKNFLIY 798 G W LVYSS +AFRSSPFF FQ L G +A IF+ TD+ P A IG ARQ I+ L+S V+++V P + SG V T + RL + V DTRVS S + G++ L++L VPV + E L R + T +LD LRV R LP+K +Y Sbjct: 29 GTWELVYSSVEAFRSSPFFWAFQEGLLAGNVNLASAIFAYTDSVPGATIGSARQTIDTSFGTLVSEVDLTVTPLPGLPGASGAVVTGCDIDASSGDGRLVVTVTDTRVSGSNVAGQL---LDQLSVPVKDIFEALRGSGAARTEVTTTYLDDTLRVMRVLPNKELFVY 193
BLAST of mRNA_L-elsbetiae_contig9654.18633.1 vs. uniprot
Match: A0A0D2KT63_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2KT63_9CHLO) HSP 1 Score: 96.3 bits (238), Expect = 3.860e-18 Identity = 69/174 (39.66%), Postives = 96/174 (55.17%), Query Frame = 1 Query: 319 GIWTLVYSSSQAFRSSPFFATFQALLGG---------------EGVAQKIFSLTDAFPNAKIGQARQIINEGCTELLSRVEMSVWPHRWISGVVETRSKVVNDDIGDR-------LELIVDDTRVSDSILGKISPRLEELRVPVDQLSERLF-DRIPRITLDTVFLDQDLRVSR 771 G W L+Y++++AFR+SPFFA+F ++ G +A IF+ TDA P A IG A QII G L+S V++SV+P + G V TRS++ LEL V+ TRV S SP L+++ VPV+QL ERL R+T + FLDQ+LRV+R Sbjct: 163 GRWELLYANTEAFRNSPFFASFSNVVSGLADVAGLSGTIDVPNGALADAIFAFTDAIPGATIGAAYQIITPGA--LVSEVDLSVFPG--LRGTVVTRSRLERPATAGGAGGAPQVLELFVESTRVERS---NFSPLLDQVSVPVEQLIERLRGSEAARVTYEVTFLDQNLRVTR 329
BLAST of mRNA_L-elsbetiae_contig9654.18633.1 vs. uniprot
Match: A0A6V1MSR7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MSR7_HETAK) HSP 1 Score: 94.7 bits (234), Expect = 6.480e-18 Identity = 76/232 (32.76%), Postives = 122/232 (52.59%), Query Frame = 1 Query: 136 STADVDESTLIKNSLLQVAAMTERGQLATEAQRNDMDTLVERLEDLKASGQLGPFEDENMIGIWTLVYSSSQAFRSSPFFATFQALLGGEGV-AQKIFSLTD-AFPNAKIGQARQIINEGCTELLSRVEMSVW-----PHRWISGVVETRSKVVNDDIGDRLELIVDDTRVSDSILGKISPRLEEL--RVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDKNFLIYVK 804 S DV +K+ ++ + A T RGQ+A+E +++ + LV +LE + S + G W LVYS + FRSSPFF + L G + A + FSL A ++IG+ +QI+ G + L+S V++ V P VV N D L++ V T+VS+S + K LE++ VPV + ERL +P + L+T +LD +R+SR D++F +Y++ Sbjct: 70 SEEDVTYREKLKSEIIALGATTNRGQIASEDEKDIVIDLVYQLESMNPSPKTNIAAS---YGTWELVYSDVELFRSSPFFMAVRDLFGDDDEKASQAFSLHRLATSTSEIGKVKQIL--GPSTLVSEVDLKVGTIPSLPFAITGTVVSDAEVTANGD--QSLQVTVGKTKVSNSNILKFL-NLEDMGAAVPVKDVFERLRGSVPTVPLNTYYLDDTMRISRTQDEHFFVYIR 293
BLAST of mRNA_L-elsbetiae_contig9654.18633.1 vs. uniprot
Match: A0A7S2Q3I4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q3I4_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 9.890e-18 Identity = 77/239 (32.22%), Postives = 128/239 (53.56%), Query Frame = 1 Query: 139 TADVDESTLI-----KNSLLQVAAMTERGQLATEAQRNDMDTLVERLEDLKASGQLGPFEDENMIGIWTLVYSSSQAFRSSPFFATFQALLGGEG--VAQKIFSLTDAFPNA-KIGQARQIINEGCTELLSRVEMSVW-----PHRWISGVVETRSK--VVNDDIGDRLELIVDDTRVSDSILGKISPRLEE--LRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDKNFLIYVK 804 + D+DE+ I K L+ ++++T RG AT + N + LV +LE L + N G W L YSS+Q+FRSSPFF ++ LG + +A+ F + DA A ++G+ RQII++ EL+S E+SV P + + G V T ++ V+ + EL V T+V S + + L++ L VPV + + + +P TL T ++D+ LR++R D+NF ++ + Sbjct: 52 SVDMDENDAIIRDELKRELILLSSVTNRGSCATTEESNLVVDLVTQLEALNPTADPAA----NCQGDWELCYSSTQSFRSSPFFLAIRSFLGDDNKQIAESAFDIHDAATTASRVGKVRQIIDKNNNELVSEYEVSVGLLPGLPVQ-VKGTVITSAEMSVIRPE---SWELEVKGTKVKGSNVPFLDAFLDDSDLEVPVGEAYKAVSGAVPVSTLKTFYVDEGLRITRDVDENFYVFTR 282
BLAST of mRNA_L-elsbetiae_contig9654.18633.1 vs. uniprot
Match: B8BQA8_THAPS (PAP_fibrillin domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQA8_THAPS) HSP 1 Score: 94.0 bits (232), Expect = 1.380e-17 Identity = 77/239 (32.22%), Postives = 124/239 (51.88%), Query Frame = 1 Query: 139 TADVDESTLI-----KNSLLQVAAMTERGQLATEAQRNDMDTLVERLEDLKASGQLGPFEDE--NMIGIWTLVYSSSQAFRSSPFFATFQALLG--GEGVAQKIFSLTDAFPNA-KIGQARQIINEGCTELLSRVEMSVW-----PHRWISGVVETRSKVVNDDIGDRLELIVDDTRVSDSILGKISPRLEE--LRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDKNFLIYVK 804 + D+DE I K LL ++++T RGQ A++ + N + LV +LE L P D N G W L YSS+Q+FRSSPFF ++ +G + +A+ F + D A ++G+ RQI++ G EL+S E+SV P R + G V T S + + EL V T+V S + L++ L +PV + + + +P L T ++D+ +R+SR D NF ++ + Sbjct: 72 SVDIDEDDAIIRDELKRELLLLSSVTNRGQCASQEEENLVVDLVTQLE------ALNPTADPALNSQGDWELCYSSTQSFRSSPFFLAIRSFMGESNKSMAENAFDIHDRATTASRVGKVRQIVDAGNMELISEYELSVGLLPGLPVR-VKGTVIT-SADMRAIAPETWELTVKATKVKGSNVPFFDQYLDDSGLELPVGEAYKAISGSVPVSVLKTFYVDEGMRISRDVDDNFFVFTR 302
BLAST of mRNA_L-elsbetiae_contig9654.18633.1 vs. uniprot
Match: A0A1X6P059_PORUM (PAP_fibrillin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P059_PORUM) HSP 1 Score: 94.4 bits (233), Expect = 2.110e-17 Identity = 75/223 (33.63%), Postives = 117/223 (52.47%), Query Frame = 1 Query: 145 DVDES-TLIKNSLLQVAAMTERGQLATEAQRNDMDTLVERLEDLKASGQLGPFEDENMIGIWTLVYSSSQAFRSSPFFATFQALLGGEGVAQKIFSLTDAFPNAKIGQARQIINEGCTELLSRVEMSVWPHRWISGVVETRSKVVNDDIGDRLELIVDDTRVSD-SILGKISPRLEELRVPVDQLSERLFD-RIPRITLDTVFLDQDLRVSRLPDKNFLIYVK 804 D D S T +K LL++AA T+RGQLAT AQ+ ++ LV LE A+ P + + G W LVY+S F+++P L A P +GQ +Q++ EL++ VE++ +P I+G V T ++V G+RLEL+V+ T V S+ GK+ +PV+QL +L + +P LDT +LD+ +R+SR + +Y K Sbjct: 154 DADASRTEMKGKLLEIAAATDRGQLATSAQKEAVEDLVSMLE--AANPTDSPVDTALIDGTWLLVYASKPLFKTTPLL------------------LAAATPLLVVGQVKQMLRVDSGELVNDVEVTAFP--MITGTVSTTARVT-PITGERLELVVEKTGVKGKSLAGKLDLGGLGGSLPVEQLYGKLKNGAVPETFLDTFYLDEKMRISRGKGGSIYVYTK 353
BLAST of mRNA_L-elsbetiae_contig9654.18633.1 vs. uniprot
Match: K0SUV6_THAOC (PAP_fibrillin domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUV6_THAOC) HSP 1 Score: 92.4 bits (228), Expect = 8.740e-17 Identity = 80/221 (36.20%), Postives = 120/221 (54.30%), Query Frame = 1 Query: 166 IKNSLLQVAAMTERGQLATEAQRNDMDTLVERLEDLKASGQLGPFEDE--NMIGIWTLVYSSSQAFRSSPFFATFQALLGGEG--VAQKIFSLTDAFPNA-KIGQARQIINEGCTELLSRVEMSVW-----PHRWISGVVETRSKVVNDDIGDRLELIVDDTRVSDSILGKISPRLEE--LRVPVDQLSERLFDR-IPRITLDTVFLDQDLRVSRLPDKNF 789 +K L+ +A+ T RGQ AT ++N + LV +LE L P D N G W L YSS+Q+FRSSPFF +A LG + VA+ FS+ D A ++G+ RQII+ TEL+S ++SV P R + G V T S ++ + E+ V TRV S + I L++ + VPV ++ E + +P L T ++D+ +R+SR D+NF Sbjct: 76 LKRELILLASTTNRGQCATLEEQNLVIDLVTQLE------ALNPTADPALNSQGDWELCYSSTQSFRSSPFFLAIRAFLGDDNKEVAENAFSIHDMATTASRVGKVRQIIDSYNTELISEYDLSVGVAPGLPVR-VKGCVVT-SADLSVSAPETWEMKVRGTRVKSSNVPFIDEWLDDSQVEVPVGRVYEAINGGDVPAAILKTYYVDEGMRISRDADENF 288 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9654.18633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9654.18633.1 >prot_L-elsbetiae_contig9654.18633.1 ID=prot_L-elsbetiae_contig9654.18633.1|Name=mRNA_L-elsbetiae_contig9654.18633.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=235bp MMVAGVGSVSTADVDESTLIKNSLLQVAAMTERGQLATEAQRNDMDTLVEback to top mRNA from alignment at L-elsbetiae_contig9654:367..4670+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9654.18633.1 ID=mRNA_L-elsbetiae_contig9654.18633.1|Name=mRNA_L-elsbetiae_contig9654.18633.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4304bp|location=Sequence derived from alignment at L-elsbetiae_contig9654:367..4670+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9654:367..4670+ >mRNA_L-elsbetiae_contig9654.18633.1 ID=mRNA_L-elsbetiae_contig9654.18633.1|Name=mRNA_L-elsbetiae_contig9654.18633.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1410bp|location=Sequence derived from alignment at L-elsbetiae_contig9654:367..4670+ (Laminarionema elsbetiae ELsaHSoW15)back to top |