mRNA_L-elsbetiae_contig9649.18626.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9649.18626.1
Unique NamemRNA_L-elsbetiae_contig9649.18626.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig9649.18626.1 vs. uniprot
Match: D8LDR4_ECTSI (Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR4_ECTSI)

HSP 1 Score: 410 bits (1055), Expect = 4.730e-138
Identity = 246/338 (72.78%), Postives = 269/338 (79.59%), Query Frame = 1 
Query:  163 MILPVISNDGLTPPPADTLTNRLSALSELVLQVPNGGGGVEVVAEYKTFLSEFGCRVGPFDVLAGDRDAQTDAVVAWLDAGARRAIVAIDVSDPSAVQGLASWSHQLPASRHRLVASFRARDLSTGAPGGXXXXXXXXXLVGSLRSAVDGLRPVVGCVQVDFEGDYAVAPRVLEELKGLRGKEGAADYVDLVFTRTXXXXXXXXXXXXXXXXXXXXXXAPWSPEEIGKLHLESGVDVQCPAKLQVQ-EKDGGXXXXXXXXXXXXXXVDAASAFLACLRTDRPDGLMATVVCDTMGVALGLVYSNSASIRASLESGRGVYWSRSRGGLWRKGDTSGAWQ 1173
            MILPVI NDG +PP AD LT RL+ALSELV+Q+P+GGG   +VA +K FL EF CRVGPFDVLAGDRDA TDAVVAWLD+GARR IVA+DVSDP AVQGLA WS QLPASRHRLVASFRARDL   A GG         L  +LR+ +DGLRPVV CVQVDFEG YA AP+VL+EL G+RGKEGA  Y+++VFTR+      XXXXXXXXX         WSPE IGKLH E GVDVQCPA L ++      XXXXXXXXXXXXXXVDA SAFL CLRTDRPDGLM TVVCDTMG+ALGLVYSNS SIRAS+ESGRGVYWSRSRGGLWRKGDTSGAWQ
Sbjct:    1 MILPVIVNDGQSPPRADALTTRLAALSELVIQLPSGGGA-GMVAGFKAFLGEFACRVGPFDVLAGDRDANTDAVVAWLDSGARRVIVALDVSDPGAVQGLADWSTQLPASRHRLVASFRARDLRMDAGGGG--------LGEALRTVMDGLRPVVSCVQVDFEGAYAAAPQVLKELGGVRGKEGAPGYMEVVFTRSPAPAPAXXXXXXXXXNNSSGNTG-WSPEGIGKLHHEYGVDVQCPATLSLEGXXXXXXXXXXXXXXXXXXXVDAVSAFLTCLRTDRPDGLMTTVVCDTMGIALGLVYSNSTSIRASIESGRGVYWSRSRGGLWRKGDTSGAWQ 328
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BLAST of mRNA_L-elsbetiae_contig9649.18626.1 vs. uniprot
Match: A0A6H5L2R7_9PHAE (PRA-CH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R7_9PHAE)

HSP 1 Score: 310 bits (793), Expect = 9.270e-99
Identity = 203/290 (70.00%), Postives = 220/290 (75.86%), Query Frame = 1 
Query:  364 DAQTDAVVAWLDAGARRAIVAIDVSDPSAVQGLASWSHQLPASRHRLVASFRARDLSTGAPGGXXXXXXXXXLVGSLRSAVDGLRPVVGCVQVDFEGDYAVAPRVLEELKGLRGKEGAADYVDLVFTRTXXXXXXXXXXXXXXXXXXXXXXAPWSPEEIGKLHLESGVDVQCPAKLQVQEKDGGXXXXXXXXXXXXXXVDAASAFLACLRTDRPDGLMATVVCDTMGVALGL--------------------VYSNSASIRASLESGRGVYWSRSRGGLWRKGDTSGAWQ 1173
            + +TDAVVAWLD+GARR IVA+DVSDP AVQGLA WS QLPASRHRLVASFRARDL   A GG         L  SLR+ +DGLRPVV CVQVDFEG YAVAP+VL+EL G+RGKEGA  Y+++VFTR+     XXXXXXXXXXXX       WSPE IGKLH E GVDVQCPA L + E    XXXXXXXXXXXXXXVDA SAFLACLRTDRPDGLM TVVCDTMG+ALGL                    VYSNS+SIRAS+ESGRGVYWSRSRGGLWRKGDTSGAWQ
Sbjct:    5 NGETDAVVAWLDSGARRVIVALDVSDPGAVQGLADWSTQLPASRHRLVASFRARDLRMDAGGGG--------LGESLRAVMDGLRPVVSCVQVDFEGVYAVAPQVLKELGGVRGKEGAPGYMEVVFTRSPAPAPXXXXXXXXXXXXSSGNTG-WSPEGIGKLHHEYGVDVQCPATLSL-EGXXXXXXXXXXXXXXXXXVDAVSAFLACLRTDRPDGLMTTVVCDTMGIALGLQPLPPPPNSCTPNLRTPPSKVYSNSSSIRASIESGRGVYWSRSRGGLWRKGDTSGAWQ 284
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BLAST of mRNA_L-elsbetiae_contig9649.18626.1 vs. uniprot
Match: A0A835ZKL0_9STRA (PRA-CH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKL0_9STRA)

HSP 1 Score: 195 bits (495), Expect = 4.650e-54
Identity = 141/350 (40.29%), Postives = 182/350 (52.00%), Query Frame = 1 
Query:  163 MILPVISNDGLTPPPADTLTNRLSALSEL-----VLQVPNGGGGVEVVAEYKTFLSEFGCRVGPFDVLAG--DRDAQTDAVVAWLDAGARRAIVAIDVSDPSAVQGLASWSHQLPASRHRLVASFRARDLSTGAPGGXXXXXXXXXLVGSLRSAVDGLRPVVGCVQVDFEGDYAVAPRVLEELKGLRGKEGAADYVDLVFTRTXXXXXXXXXXXXXXXXXXXXXXAPWSPEEIGKLHLESGVDVQCPAKLQVQEKDGGXXXXXXXXXXXXXXV------DAASAFLACLRTDRPDGLMATVVCDTMGVALGLVYSNSASIRASLESGRGVYWSRSRGGLWRKGDTSGAWQ 1173
            MI+P++       PP D        + EL     +  V   G   +    Y   L++ GCRVGPF    G  + DA TDA+V+WLD GARRA++ +     SA   LA+W+ QLP +R RLV   ++ +L +              +  +L   ++ L   V  +Q D       A R+ + LK LRGKEG+A Y++LVF                                IG+LH E G+DV  P  ++           XXXXXXXXXX       D A+A  ACLR+DRPDGL+ TVVCD  GVALGLVYSN+ S+ AS+  GRGVYWSRSRGGLWRKGDTSGAWQ
Sbjct:    1 MIIPLVQ-----VPPTDGSAVTAEQVPELRRLHVIGDVHLAGAAHDAHTSYAPLLAQCGCRVGPFGAEDGFLEDDAITDAIVSWLDKGARRAVLHMQQPAASAA-ALAAWTQQLPDARSRLVLQVQSSNLGSSEA----------EIAAALPPLIESLSTAVCTMQFDMAESPVTATRLAQLLKPLRGKEGSAAYLELVFCNVDQLTTSL----------------------IGQLHKEFGIDVVAPCHVESVPDPSDTATPXXXXXXXXXXXXXXXXQDVAAAVFACLRSDRPDGLIPTVVCDECGVALGLVYSNAQSVAASIACGRGVYWSRSRGGLWRKGDTSGAWQ 312
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BLAST of mRNA_L-elsbetiae_contig9649.18626.1 vs. uniprot
Match: A0A7S2V4U4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4U4_9STRA)

HSP 1 Score: 140 bits (352), Expect = 8.870e-34
Identity = 101/284 (35.56%), Postives = 136/284 (47.89%), Query Frame = 1 
Query:  325 CRVGPFDVLAGDRDAQTDAVVAWLDAGARRAIVAIDVSDPSAVQGLASWSHQLPASRHRLVASFRARDLSTGAPGGXXXXXXXXXLVGSLRSAVDGLRPVVGCVQVDFEGDYAVAPRVLEELKGLRGKEGAADYVDLVFTRTXXXXXXXXXXXXXXXXXXXXXXAPWSPEEIGKLH-LESGVDVQCPAKLQVQEKDGGXXXXXXXXXXXXXXVDAASAFLACLRTDRPDGLMATVVCDTMGVALGLVYSNSASIRASLESGRGVYWSRSRGGLWRKGDTSGAWQ 1173
            C VGPFD  + +     D+  +WLD GA   I  I  S  + +  +      LP  R R++      D++    G          +VG +       R ++ C Q + E        V E +K +RGKEG+ D+V LV                            W+P+++G +H ++  VD  CPA +  ++                  V  A AF+AC RTDRPDGL  TVV D  GVALGLVYSN+ S++AS  + RGVYWSRSRGGLWRKGDTSGA Q
Sbjct:   51 CLVGPFDWKSTE---SLDSATSWLDKGAAAGIFDILPSSET-LSDIRDALSTLP--RDRVIVRIVISDVA--GEGSEDKLASLKDVVGEVGKVAS--RVILACTQEEAES----FGEVCEAMKEVRGKEGSPDHVGLVLQAPL-----------------------WTPDQVGAIHRMKPQVDAACPAAILPEDAP-----------PQPGKVSLADAFMACCRTDRPDGLFTTVVVDECGVALGLVYSNALSVKASFAAKRGVYWSRSRGGLWRKGDTSGAVQ 286
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BLAST of mRNA_L-elsbetiae_contig9649.18626.1 vs. uniprot
Match: A0A7S2WIY7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WIY7_9STRA)

HSP 1 Score: 125 bits (313), Expect = 2.230e-28
Identity = 117/302 (38.74%), Postives = 139/302 (46.03%), Query Frame = 1 
Query:  325 CRVGPFDVLAGDRDAQTDAVVAWLDAGARRAIV-AIDVSDPSAVQG---------LASWSHQLPASRHRLVASFRARDLSTGAPGGXXXXXXXXXLVGSLRSAVDGLRPVVGCVQVDFEGD-YAVAPRVLEELKGLRGKEGAADYVDLVFTRTXXXXXXXXXXXXXXXXXXXXXXAPWSPEEIGKLH--------LESGVDVQCPAKLQVQEKDGGXXXXXXXXXXXXXXVDAASAFLACLRTDRPDGLMATVVCDTMGVALGLVYSNSASIRASLESGRGVYWSRSRGGLWRKGDTSGAWQ 1173
            CRVGPF   AG+  A   A   W+ AGA RA++  +  SD     G         LA W  + P  RHRLVA      L T               V +L   +  +RP+VG V +   G  +       +E K  RG +   D++ L   +                        PW  EE+  LH          S  D               XXXXXXXXXXX   +D    F+ACLRTDR DGL  TVV D  GVALGLVYSN  SIRA++   RGVYWSRSRGGLWRKGDTSGAWQ
Sbjct:   16 CRVGPFP--AGE--AGLAAASEWMHAGAFRAVLDLVPTSDTLPTAGDVDAFGERLLALWKQEQP--RHRLVARVIV-PLGTS--------------VAALNELLARVRPLVGAVHLVLPGPVFETVVATAKEFKTSRGSDSERDHLLLSVEKQE----------------------PWDLEEVRALHQAQIHSVLATSLRDEHATEAPPTXXXXXXXXXXXXXXXXXSANLDLVDCFVACLRTDRSDGLYTTVVADQCGVALGLVYSNPESIRAAVCCSRGVYWSRSRGGLWRKGDTSGAWQ 274
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BLAST of mRNA_L-elsbetiae_contig9649.18626.1 vs. uniprot
Match: A0A6H5LAS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAS8_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 3.410e-23
Identity = 51/73 (69.86%), Postives = 59/73 (80.82%), Query Frame = 1 
Query:  163 MILPVISNDGLTPPPADTLTNRLSALSELVLQVPNGGGGVEVVAEYKTFLSEFGCRVGPFDVLAGDRDAQTDA 381
            MILPVI NDG +PP AD LT RL+ALSELV+Q+P+GGG V +VA +K FL EF CRVGPFDVLA DRDA+  A
Sbjct:    1 MILPVIVNDGQSPPRADALTTRLAALSELVIQLPSGGG-VAMVAGFKAFLGEFACRVGPFDVLAADRDAKASA 72
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BLAST of mRNA_L-elsbetiae_contig9649.18626.1 vs. uniprot
Match: A0A0G4GMC0_VITBC (PRA-CH domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GMC0_VITBC)

HSP 1 Score: 107 bits (266), Expect = 8.330e-22
Identity = 102/339 (30.09%), Postives = 135/339 (39.82%), Query Frame = 1 
Query:  163 MILPVISNDGLTPPPADTLTNRLSALSELVL-QVPNGGGGVEVVAEYKTFLSEFGCRVGPFDVLAGDRDAQTDAVVAWLDAGARRAIVAIDVSDPSAVQG-LASWSHQLPASRHRLVASFRARDLSTGAPGGXXXXXXXXXLVGSLRSAVDGLRPVVGCVQVDFEGDYAVAPRVLEELKGLRGKEGAADYVDLVFTRTXXXXXXXXXXXXXXXXXXXXXXAPWSPEEIGKLHLESGVDVQCPAKLQVQEKDGGXXXXXXXXXXXXXXVDAASAFLACLRTDRPDGLMATVVCDTMGVALGLVYSNSASIRASLESGRGVYWSRSRGGLWRKGDTSGAWQ 1173
            M++PV+    L  P    LT  L+  S   L QV       +V+           C VGPF +     D   D+ +  LD GA    +  D +      G L      +P    + +A   A ++S G             LVG+LR  V       G V++    +      ++  LK  RGK+   DY+ LV                           P          +E G    C + L      G               +DA   F +CL TDRPDGL  TVV D  G+ALGLVYS+  SIR ++   RGVYWSRSR GLWRKGDT+GA Q
Sbjct:    1 MLIPVVDLSSLALPLPQRLTEWLTRASSFALCQVAIRNAAQDVIL---ALCRPLRCWVGPFSMT----DEGMDSAIKCLDGGAAMVEMTADEAQRGEWVGVLERLMDGVPPEAVKRIAL--AVEVSPGES------DHLPGLVGALRGKV-------GWVKLTSRREGIDWMALVASLKTARGKDVQEDYMQLVVEGAGVDGDLVATLQGKDVHVMAGAAVP----------MEEGQPSVCFSSLLPTANGGSAPASGGSSPSPSPPLDAVECFTSCLTTDRPDGLFTTVVSDPGGIALGLVYSSVESIRVAIALQRGVYWSRSRKGLWRKGDTTGATQ 307
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BLAST of mRNA_L-elsbetiae_contig9649.18626.1 vs. uniprot
Match: A0A2R5GVC6_9STRA (Histidine biosynthesis trifunctional protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVC6_9STRA)

HSP 1 Score: 108 bits (269), Expect = 8.600e-22
Identity = 98/298 (32.89%), Postives = 128/298 (42.95%), Query Frame = 1 
Query:  289 VAEYKTFLSEFGCRVGPFDVLAGDRDAQTDAVVAWLDAGARRAIVAIDVSDPSAVQGLASWSHQLPASRHRLVASFRARDLSTGAPGGXXXXXXXXXLVGSLRSAVDGLRPVVGCVQVDFEGDYAVAPRVLEELKGLRGKEGAADYVDLVFTRTXXXXXXXXXXXXXXXXXXXXXXAPWSPEEIGKLHLESGVDVQCP---AKLQVQEKDGGXXXXXXXXXXXXXXVDAASAFLACLRTDRPDGLMATVVCDTMGVALGLVYSNSASIRASLESGRGVYWSRSRGGLWRKGDTSGAWQ 1173
            V ++   L  + C+VGP +  A       + +  WL+ GA + I+        +++ LA  + QLP  + RLVA  +A DLS                      AV+ L   VG + V      + A  V+E  +   G  G    +++                                  IGKLH     D       A + +  KD                     A ++CLRTDR DGL ATVV D  GVALGLVYS+SASI ASLE GRGVYWSRSR  LWRKGDTSGA+Q
Sbjct:  381 VHQWARALYSYPCQVGPIEAGA------LEEITQWLNHGALQVIL------DGSLEELAEVAEQLP--KERLVARLKADDLS--------------------EDAVEKLLACVGGISV--VSPASTAAEVIETAERAWGLVGKRLTINIEAPELASGSEAQKENNPL----------------IGKLHSLHSSDYPVSVSHASVSLPGKDAAVDVPDSDAVFCL-----GRALVSCLRTDRTDGLYATVVADEFGVALGLVYSSSASILASLECGRGVYWSRSRQSLWRKGDTSGAFQ 621
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BLAST of mRNA_L-elsbetiae_contig9649.18626.1 vs. uniprot
Match: A0A7S2RTE9_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RTE9_9STRA)

HSP 1 Score: 104 bits (259), Expect = 3.840e-21
Identity = 51/72 (70.83%), Postives = 56/72 (77.78%), Query Frame = 1 
Query:  958 VDAASAFLACLRTDRPDGLMATVVCDTMGVALGLVYSNSASIRASLESGRGVYWSRSRGGLWRKGDTSGAWQ 1173
            VD     ++CLRTDRPDGL  TVV D  GVALGLVYS+  S+ ASLE GRGVYWSRSR  LWRKGDTSGA+Q
Sbjct:  169 VDIGQGLISCLRTDRPDGLYTTVVTDEYGVALGLVYSSKESLLASLECGRGVYWSRSRNNLWRKGDTSGAYQ 240
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BLAST of mRNA_L-elsbetiae_contig9649.18626.1 vs. uniprot
Match: A0A0G4HM72_9ALVE (PRA-CH domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HM72_9ALVE)

HSP 1 Score: 105 bits (261), Expect = 4.240e-21
Identity = 50/66 (75.76%), Postives = 55/66 (83.33%), Query Frame = 1 
Query:  976 FLACLRTDRPDGLMATVVCDTMGVALGLVYSNSASIRASLESGRGVYWSRSRGGLWRKGDTSGAWQ 1173
            F A L++DRPDGL  TVVCD  GVALGLVYSN  S+ A++E  RGVYWSRSRGGLWRKGDTSGAWQ
Sbjct:  256 FAATLKSDRPDGLFTTVVCDESGVALGLVYSNVQSLHAAVECMRGVYWSRSRGGLWRKGDTSGAWQ 321
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9649.18626.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDR4_ECTSI4.730e-13872.78Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Ectocarp... [more]
A0A6H5L2R7_9PHAE9.270e-9970.00PRA-CH domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835ZKL0_9STRA4.650e-5440.29PRA-CH domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S2V4U4_9STRA8.870e-3435.56Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2WIY7_9STRA2.230e-2838.74Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6H5LAS8_9PHAE3.410e-2369.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4GMC0_VITBC8.330e-2230.09PRA-CH domain-containing protein n=2 Tax=Vitrella ... [more]
A0A2R5GVC6_9STRA8.600e-2232.89Histidine biosynthesis trifunctional protein n=1 T... [more]
A0A7S2RTE9_9STRA3.840e-2170.83Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A0G4HM72_9ALVE4.240e-2175.76PRA-CH domain-containing protein n=1 Tax=Chromera ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9649contigL-elsbetiae_contig9649:243..6374 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score412.5
Seed ortholog evalue2.1e-112
Seed eggNOG ortholog2880.D8LDR4
Preferred nameHIS4
KEGG rclassRC00002,RC00099,RC00242,RC00463,RC01055
KEGG koko:K11755,ko:K14152
KEGG ReactionR01158,R01163,R03012,R04035,R04037
KEGG Pathwayko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230
KEGG ModuleM00026
Hectar predicted targeting categorymitochondrion
GOsGO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0004635,GO:0004636,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016462,GO:0016491,GO:0016614,GO:0016616,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
EggNOG free text desc.phosphoribosyl-ATP diphosphatase activity
EggNOG OGsCOG0139@1,KOG4311@2759
EC1.1.1.23,3.5.4.19,3.6.1.31
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Ec32 ortholog descriptionPhosphoribosyl-ATP pyrophosphohydrolase-like
Ec32 orthologEc-19_001690.1
Exons4
Model size1173
Cds size1173
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9649.18626.1prot_L-elsbetiae_contig9649.18626.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9649 243..6374 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817030.4230735-CDS-L-elsbetiae_contig9649:242..3561622817030.4230735-CDS-L-elsbetiae_contig9649:242..356Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9649 243..356 -
1691683995.045418-CDS-L-elsbetiae_contig9649:242..3561691683995.045418-CDS-L-elsbetiae_contig9649:242..356Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9649 243..356 -
1622817030.4355052-CDS-L-elsbetiae_contig9649:1955..23391622817030.4355052-CDS-L-elsbetiae_contig9649:1955..2339Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9649 1956..2339 -
1691683995.0859082-CDS-L-elsbetiae_contig9649:1955..23391691683995.0859082-CDS-L-elsbetiae_contig9649:1955..2339Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9649 1956..2339 -
1622817030.4460151-CDS-L-elsbetiae_contig9649:2814..31171622817030.4460151-CDS-L-elsbetiae_contig9649:2814..3117Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9649 2815..3117 -
1691683995.0999103-CDS-L-elsbetiae_contig9649:2814..31171691683995.0999103-CDS-L-elsbetiae_contig9649:2814..3117Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9649 2815..3117 -
1622817030.4579477-CDS-L-elsbetiae_contig9649:6002..63741622817030.4579477-CDS-L-elsbetiae_contig9649:6002..6374Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9649 6003..6374 -
1691683995.1112237-CDS-L-elsbetiae_contig9649:6002..63741691683995.1112237-CDS-L-elsbetiae_contig9649:6002..6374Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9649 6003..6374 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9649.18626.1

>prot_L-elsbetiae_contig9649.18626.1 ID=prot_L-elsbetiae_contig9649.18626.1|Name=mRNA_L-elsbetiae_contig9649.18626.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=391bp
MVVGRYHRPLHGHAALGGISFSVQRLSCWVKYSRSGAPQPRNSRKLGSAR
EQGNMILPVISNDGLTPPPADTLTNRLSALSELVLQVPNGGGGVEVVAEY
KTFLSEFGCRVGPFDVLAGDRDAQTDAVVAWLDAGARRAIVAIDVSDPSA
VQGLASWSHQLPASRHRLVASFRARDLSTGAPGGAGGAGGGGGLVGSLRS
AVDGLRPVVGCVQVDFEGDYAVAPRVLEELKGLRGKEGAADYVDLVFTRT
TTTEGGGTTDEGATTTTAAAAAAPWSPEEIGKLHLESGVDVQCPAKLQVQ
EKDGGDGGGGGSGGGGDGAVDAASAFLACLRTDRPDGLMATVVCDTMGVA
LGLVYSNSASIRASLESGRGVYWSRSRGGLWRKGDTSGAWQ
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mRNA from alignment at L-elsbetiae_contig9649:243..6374-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9649.18626.1 ID=mRNA_L-elsbetiae_contig9649.18626.1|Name=mRNA_L-elsbetiae_contig9649.18626.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6132bp|location=Sequence derived from alignment at L-elsbetiae_contig9649:243..6374- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTTGTCGGGCGGTACCACAGGCCACTGCACGGGCACGCTGCACTTGG
TGGCATCTCCTTCTCTGTGCAGAGGCTCAGTTGCTGGGTGAAATATAGCA
GAAGCGGCGCGCCACAACCCCGCAACAGCAGAAAGCTTGGAAGCGCGCGA
GAGCAGGGAAACATGATCTTGCCTGTGATCAGCAACGATGGCCTGACGCC
GCCGCCCGCCGACACACTCACGAACCGCCTCTCAGCCCTTTCAGAGCTTG
TGCTTCAAGTTCCCAACGGTGGTGGCGGGGTTGAGGTGGTTGCTGAATAC
AAGACGTTCCTCAGCGAGTTTGGCTGCCGCGTAGGGCCGTTCGATGTGCT
CGCAGGGGACCGGGACGCTCAGGTACGCTCTCCTTCGAACCATCGAACCA
TGGGTATTGTAACATAGCATGCGTTTAGACTAGACTGATACAGCTTTGTA
TGTGTCATATATGTAGCTGGTGTGCCCACCTGGCAAACACGCGTTTGGTA
ATGTGATTTGTATGTGTGTGCTTACTTCTGTATGTGCGAATGCCCTGAAA
CACGCCCTCACACGTCGATTTGAAACAGCAAACCGCACCACACACCCCTT
GCTTGCCCTTGAAGCGATTTTTGGAGCTCCATTGCTCCGTAACGAAGAGG
GTACCAACACCCAGCGCCAATCGACACATTTTCGGACAGCCCTCGACTGT
GTAGATATTTCCAACGCCAGCCCCTTTCGGCACTGGCACTCTTTTTGCTC
GGGGAAGAATCGAGCTTGGCTGTGCAGGGGGTGTGGTATCTTGTGTCACC
TACGGTTCACACGGTACTTATGTACATACATACGTGCATTGCATGCACTC
ATTCTGGTACGCAGATGATGGTGTCCTTGGGGTTTTACCGGTAGTATTTA
GAAGCTGATGGATAACCGAGCCACAACATCAACATCAGCAGCAAGCGCCA
GCGAGCACCAGCAAAGTCGCGTCGTACAAGAAAGCAGTGGCTGATAATAG
TAGTTTTTCCGCGAAAAAAATACCGGCAGTAGGCTTTGATCGTTGATAGA
AGGGGAGAAAGCAGGTGTGTTTCCACCATGTAGCGAAGAACGCAATAAAC
TATCTTTGTGATTTTCTCTTTCGCACGCAAGGCGACAAGGCGACCTACTT
CCGAACTTCCGAATCATTCAAGCGCCGCGCTGGTTCTCGAAAAGCACCAA
TTGGGACTCCGACACTCCGACTTCTCGGTCGCTTTCGTATCACACAAACT
GCGCACCCATCGGGACAGGGGTTGCGGTCCGCTCGCTCGAAGGGGGAGAG
GGTATGTTCAACGCGGAGACAGACGTGGACACAGCCGGGGGGGTCGCTGA
TTTTCTCACAGTCCTGTGTGTGCAGAACTCCTCTCGATACAAACGCCTGC
GGTGTGTGTAGACTAGGCATGCAGCTGAGTTTTGGGAGGCCACGAAAACC
CGAGCAAGCTCGTCGACCTGGGTATGTATCGATCGCAAAACTAACTGCTG
GAGGTGACTCTATCGACTTGAAGAGCACCCTCTGCCACATTGGTTTGACA
TTCAGACGTCGCGCAGTTGCCGAACGCCGGCACCTCAAAGACAAAATACA
CCGGGTAGTCTACGCAGGTTTTTGTTCAGCGAAACATATGGGATAAAGTA
TGGAATCGGGAATGTCTGGGGGGTCGGTGGTTAGGGTTAGGGTTAGGGTT
ACGGAACCCCTACTACTCTATTTCACATATAAACCAATATTCCCCGTTTT
TTCTCGCGAAGGCAGTCCAATACACCACCTGCACGCCGACAACTCGGCGA
GCGAAGCACGAAACTCCAAACCGACAAGTGCACTGAGGAGTGAAGCACAG
TTCCTTTCCTGCACACCCTTCGGTTTTCAGATTGGTGGTCTATAGCGGAA
ACGGCGGCGAAAAGATCAGCACTAACTTACTCCTAACTAACGAACACGGG
CCCCCAAACACTGGGGTTTCGTGCATGCAACGAGAGGGGGGTCTATATGA
AAGTTTTTGTGCGAACAAAAACTACTATATAAAAAAAATGTGTTCGGTTG
GGAATGTGACCCTCTACGCATGATGGCATTCTGACAGACAGTGTTACTGG
AATTCGGCTTTCAAGGGGGCGCATACGCGATTTGGGTTTTTAGGGAGGGA
CTTCCTGGGACGTTAGAATACACAGATCTTCAGTGTAGGCAGATATGGAG
AGGTCGAAAGCTCAGCTTAAAGAAAGTCATCCACGCCAGGAGTCCGAGGA
CATGTGGGTAATATCCTTGGTGTATAATAATAGGACAAAATTAGGCGTCA
GTTCTTGCAGGGCACTAACTCTCAGCATCGCTTGACATTCGTACTGGACT
AGAAGAGCTCGGACGAGAGAGAGAGAGCCAGTCCGCCGATCCACAGCACG
ATTTTGGGTGGTTTGGGGGCAGGATCAGATAGCATCCATCCACGAGGAAA
CTAATCACATCGGGAAGCACACGGTCCCAGGTGTGTAGAACACTTGTCAA
TACCGAAAACCGTCATGCAGGGCACTGGCTGCAGCTGCCGCTGCCCACTG
GTGCTGGCCTCGCCGAGCCCCTCCGTGCGTGTTCGAAGGCAGCTCTGATT
TGACGCTCACAGAGCGATTCAGGGTCTGAAACCCGCAACGACGCTAAATA
GTCATCAGTACAATAGTATATATCCTCCCTTGTGGTTTGTTTCGTCTGGG
ATGGTGACTGTGCGCTACAAGGGCTGGCGCACCGGTGCGAGCGTGTGCCT
CGACAGGGCTGGGTTTTTGGTTATATAGAAGTATACATATATATATATAT
ATATATATTTTCCGTGTTTTCGTCTGCAGGGCCACTGCTGCAGCAGTCTG
TTGACGCCCTAAATCGTTCGTACTGCGCCACTAGAGCATCGATTCGCTTG
GTTATTTTTACCCCAACACTCGACAGGTATCAGAGCTACAAGTCTAAGCT
TGCTGCGCTGCAAAATCTGTATTCAGCTGCGAGCACTTGTCAAGAAAAAG
CTCATTTCTGCGCCTCCTTGAAATCGATTCCGAATAACACACTGCAGACG
CTCGTTTGGTCTCCGGAGGCCACCCCCCTCTTTTGCTACACTACATCATG
GCCCATCGACGACTCCCCACTCATCAACCGCACGCTGGGCTACTACCCAT
TGACACCTCCTCCTCCTCCCGACCCCCTCCCGCAGCCCTTACCCCCCCCC
CCCGTTTTTCCACCCTAACCCCTGCTCTCTCCGAAAACACAAACCAACCT
CAAACAGACTGACGCCGTCGTGGCCTGGCTGGACGCCGGCGCGCGCCGAG
CGATCGTCGCCATCGACGTCTCCGACCCTTCCGCCGTCCAAGGCCTCGCC
TCCTGGTCCCACCAGCTCCCTGCCTCGCGGCACAGGCTGGTCGCCTCTTT
TCGCGCGCGGGATCTCAGCACCGGGGCCCCCGGGGGCGCCGGGGGCGCCG
GGGGCGGGGGCGGGCTGGTTGGGTCGCTGCGGTCGGCCGTGGACGGGCTG
AGACCGGTCGTGGGCTGCGTCCAGGTGGACTTCGAGGGGGACTACGCGGT
CGCTCCCCGGGTAAGCTGGCGGCTGCGGCCCGCCATATCCACGCATATGT
AAACAGAATGTACAAGCTGGTAGGTGACATACACTGTGCATATGTAAACA
GAATGTACAAGCTGGTAGGTGACATACACTGTACTTTCTAGTAGAAGTTT
ATGGATACATGCAACAAGTATGCAGCGGGGTGGGGGGGGGGGGCAGGCAG
GCGTCCTGAATGCGGCGCACAGCAGTGAGAGTAGTGGGCCCGCGGCGTTC
AACCGTGGACCGCCGCGTTGGCCTCGGAGAAGGGAGGACCGCATACGGGC
GGCAGGAGCAAAGGGGCCTGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTGCCGTGCTTGACGTCGGTCGTGTCTCGGTTGCTCACTGCCGCTGTT
TCCTGCCGCTGTTTGCTGCTGCTGCTGCTGCTGCTGCGATACCCTTTGTC
TCCCCCCAATCCAACCCCCATGCCGGCCAACACAGGTCCTGGAGGAGCTC
AAGGGCCTGCGGGGCAAAGAGGGGGCGGCCGACTACGTCGACCTCGTCTT
CACCCGCACCACCACCACCGAGGGGGGGGGCACAACAGACGAAGGCGCTA
CCACCACCACCGCCGCAGCAGCAGCAGCGCCTTGGTCCCCGGAGGAGATC
GGAAAGCTCCACCTCGAGTCCGGGGTCGACGTGCAGTGTCCGGCGAAGCT
GCAAGTCCAGGAAAAAGACGGCGGCGATGGCGGCGGCGGTGGCAGCGGCG
GTGGCGGAGACGGTGCCGTGGACGCCGCGAGCGCGTTCCTGGCGTGCCTC
CGAACAGACCGACCCGACGGGCTGATGGCCACCGTGGTCTGCGACACGAT
GGGCGTTGCGCTTGGGCTGGTGAGCGTGGCCAGGGGTGTCGTTGAGGGGG
GGGAGGGGGGGGGCTCTGGTGTGGATGGGCTCTTCAGGGGAAAGGGGCGG
GATTGGGGGAGGGGGAGAAGGGAGAGGGGTCGGGGTGGAGAAGTGGAGGC
CCGGCGGGTTCGTTTGTACAGGTGGTGTGGGGTTGCGGAGGGTGGATCCC
AGCTTTTGTACGGATGGGTTTTGCTGTCGGATGGGGGCAGGGATGGCCGG
GGTGGGTGCGCGCTGGTTCGGCGTGTCTTCTCACGGTGGGGTGGTGAGAA
GATGTATGTAGAGCTTCCAGTATTTTTTATCAATGTATACCAATGTCAGC
AGTCTACGTCTACATAGCCTGCGAAGAAGTCGTTCCAGAGGGACTGATAC
TGTTGTAGACAGTCCTGCTGACAGTCCCGCCACCCGGCCTCTTTTAATAA
ATGTTACAAATGTCAGCAGTCTAAATACGTCTGCATAGTCTGCGAAGAAG
TCATTCCAGAGGGACTGACTGTTGTAGGCATATACTAACCCCCTGTTTCC
CCATCCAAGATATACTCACTCGCACAAAAATCCGTACGTAGTTCTATCAC
TCTGCTTCTCTACCGGCGAGAGACGCTGAATAGTCGTGTTCACGAAGCTG
TGCATGTGTGGTGCGAACAGCAGAGCGACACAGGACAAATACCGTGATCG
CCTCTTAAATTCTTCCGGGGGGTGTTGACACCTTTCGAGGCTGATTTTCT
CCGCAATTGGGGGGGGGGGCCTCGTCGTGCGCGCCTGGGCGCCTTTGCGC
CAGTGTGGGGGTTGCTATCGCCGAGCTTTGCGCCCTTGGAATTATCTCAC
CGAAACCTTTCCATAGTTCACACGCTTGCTGATTTGATGGTAACCCTCTC
GGCTGAGGAGAAAACCGGCTTCGAGAATGTTTAACGCCCTGGGGAGGGGT
ACTCAAGACACGATTACCGTATTGTAGTATTAGTAGAGTCCTCGGCACTC
GCATTTGCTTCCCCTCCCAGCCTGCGCGCGTGTGACGCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCC
CCCCCCACCACCCCCCCCCCCCCCCCCNNNNNNNNNNTTTCCGTTTTTTG
TTATTGGTTTAGTCCCCCGCCCCCCCCTTTTTCTCCCCCCCCCCCCCCGC
GGGGGTGGCCCCCCCCCCCCCCCCCCCCCGTCGTGTGCCAAGTCCAGATC
CCCCAACACAAGCCAAATACCACTAAAATACCCGGTACTTCTGCGAATGC
AAGACGTGCCAATACCAAGGTTCACCTTTTCCCCCGATATCTTCGCTTCC
AATGCGTCCAGCCTTCCCCCCCGCTGGCAAGGGGCTGGACGGCTCCTACC
CCCTTCGCCCCCAACCGTACATGACCCCAACCACTAGTAAGCGCTGGCGA
GGGGGTCCCAGAGAGAGGGTAGATTCCCCGGAGCTCCCTGCACCGGCACC
TGGCGAGTCCATTCGGACCGTGTATATCTTTTGTTCGTTAGATGGACTTA
TCCACTAGGCCACTCAGTCAAGCATGGCTCCGACGCTTGAAACCCCCATC
GCGCGGAACCCCCCGTAGGTGTACTCGAACTCCGCCAGCATCCGCGCCTC
CTTGGAGAGCGGCAGGGGGGTGTACTGGTCGCGGTCTAGGGGGGGGCTCT
GGCGCAAGGGCGACACTAGCGGGGCGTGGCAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9649:243..6374-

>mRNA_L-elsbetiae_contig9649.18626.1 ID=mRNA_L-elsbetiae_contig9649.18626.1|Name=mRNA_L-elsbetiae_contig9649.18626.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2346bp|location=Sequence derived from alignment at L-elsbetiae_contig9649:243..6374- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTTGTCGGGCGGTACCACAGGCCACTGCACGGGCACGCTGCACTTGG
TGGCATCTCCTTCTCTGTGCAGAGGCTCAGTTGCTGGGTGAAATATAGCA
GAAGCGGCGCGCCACAACCCCGCAACAGCAGAAAGCTTGGAAGCGCGCGA
GAGCAGGGAAACATGATCTTGCCTGTGATCAGCAACGATGGCCTGACGCC
GCCGCCCGCCGACACACTCACGAACCGCCTCTCAGCCCTTTCAGAGCTTG
TGCTTCAAGTTCCCAACGGTGGTGGCGGGGTTGAGGTGGTTGCTGAATAC
AAGACGTTCCTCAGCGAGTTTGGCTGCCGCGTAGGGCCGTTCGATGTGCT
CGCAGGGGACCGGGACGCTCAGATGGTTGTCGGGCGGTACCACAGGCCAC
TGCACGGGCACGCTGCACTTGGTGGCATCTCCTTCTCTGTGCAGAGGCTC
AGTTGCTGGGTGAAATATAGCAGAAGCGGCGCGCCACAACCCCGCAACAG
CAGAAAGCTTGGAAGCGCGCGAGAGCAGGGAAACATGATCTTGCCTGTGA
TCAGCAACGATGGCCTGACGCCGCCGCCCGCCGACACACTCACGAACCGC
CTCTCAGCCCTTTCAGAGCTTGTGCTTCAAGTTCCCAACGGTGGTGGCGG
GGTTGAGGTGGTTGCTGAATACAAGACGTTCCTCAGCGAGTTTGGCTGCC
GCGTAGGGCCGTTCGATGTGCTCGCAGGGGACCGGGACGCTCAGACTGAC
GCCGTCGTGGCCTGGCTGGACGCCGGCGCGCGCCGAGCGATCGTCGCCAT
CGACGTCTCCGACCCTTCCGCCGTCCAAGGCCTCGCCTCCTGGTCCCACC
AGCTCCCTGCCTCGCGGCACAGGCTGGTCGCCTCTTTTCGCGCGCGGGAT
CTCAGCACCGGGGCCCCCGGGGGCGCCGGGGGCGCCGGGGGCGGGGGCGG
GCTGGTTGGGTCGCTGCGGTCGGCCGTGGACGGGCTGAGACCGGTCGTGG
GCTGCGTCCAGGTGGACTTCGAGGGGGACTACGCGGTCGCTCCCCGGACT
GACGCCGTCGTGGCCTGGCTGGACGCCGGCGCGCGCCGAGCGATCGTCGC
CATCGACGTCTCCGACCCTTCCGCCGTCCAAGGCCTCGCCTCCTGGTCCC
ACCAGCTCCCTGCCTCGCGGCACAGGCTGGTCGCCTCTTTTCGCGCGCGG
GATCTCAGCACCGGGGCCCCCGGGGGCGCCGGGGGCGCCGGGGGCGGGGG
CGGGCTGGTTGGGTCGCTGCGGTCGGCCGTGGACGGGCTGAGACCGGTCG
TGGGCTGCGTCCAGGTGGACTTCGAGGGGGACTACGCGGTCGCTCCCCGG
GTCCTGGAGGAGCTCAAGGGCCTGCGGGGCAAAGAGGGGGCGGCCGACTA
CGTCGACCTCGTCTTCACCCGCACCACCACCACCGAGGGGGGGGGCACAA
CAGACGAAGGCGCTACCACCACCACCGCCGCAGCAGCAGCAGCGCCTTGG
TCCCCGGAGGAGATCGGAAAGCTCCACCTCGAGTCCGGGGTCGACGTGCA
GTGTCCGGCGAAGCTGCAAGTCCAGGAAAAAGACGGCGGCGATGGCGGCG
GCGGTGGCAGCGGCGGTGGCGGAGACGGTGCCGTGGACGCCGCGAGCGCG
TTCCTGGCGTGCCTCCGAACAGACCGACCCGACGGGCTGATGGCCACCGT
GGTCTGCGACACGATGGGCGTTGCGCTTGGGCTGGTCCTGGAGGAGCTCA
AGGGCCTGCGGGGCAAAGAGGGGGCGGCCGACTACGTCGACCTCGTCTTC
ACCCGCACCACCACCACCGAGGGGGGGGGCACAACAGACGAAGGCGCTAC
CACCACCACCGCCGCAGCAGCAGCAGCGCCTTGGTCCCCGGAGGAGATCG
GAAAGCTCCACCTCGAGTCCGGGGTCGACGTGCAGTGTCCGGCGAAGCTG
CAAGTCCAGGAAAAAGACGGCGGCGATGGCGGCGGCGGTGGCAGCGGCGG
TGGCGGAGACGGTGCCGTGGACGCCGCGAGCGCGTTCCTGGCGTGCCTCC
GAACAGACCGACCCGACGGGCTGATGGCCACCGTGGTCTGCGACACGATG
GGCGTTGCGCTTGGGCTGGTGTACTCGAACTCCGCCAGCATCCGCGCCTC
CTTGGAGAGCGGCAGGGGGGTGTACTGGTCGCGGTCTAGGGGGGGGCTCT
GGCGCAAGGGCGACACTAGCGGGGCGTGGCAGGTGTACTCGAACTCCGCC
AGCATCCGCGCCTCCTTGGAGAGCGGCAGGGGGGTGTACTGGTCGCGGTC
TAGGGGGGGGCTCTGGCGCAAGGGCGACACTAGCGGGGCGTGGCAG
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