mRNA_L-elsbetiae_contig9647.18625.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9647.18625.1 vs. uniprot
Match: A0A6H5K3H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H5_9PHAE) HSP 1 Score: 175 bits (444), Expect = 4.060e-48 Identity = 85/135 (62.96%), Postives = 105/135 (77.78%), Query Frame = 2 Query: 533 QVRALLENVDIEGTVLDCCGAAKDAVDTVLTAHGLHVATNDFTSRLTANSHMDAASDKFVEAYSEYSRRPDWVVTSPPYKNAFPILKQALRLGRKGVAFKLRLTFLEPTKTRGRWLKDNPPDRIVMLPRATYRSR 937 +V ALL NV + G VLD CG+A DA+ VL AH L+V+TNDF RLTA++H+DA S++F +S +RPDW+VTSPPY NAF IL +AL + R GVAFKLRL+FLEPTKTRG+WLKDNPP +V+LPRATY R Sbjct: 14 KVDALLLNVKLAGGVLDACGSASDAIKVVLEAHSLNVSTNDFNPRLTADTHLDATSEEFTAMFSTEGQRPDWIVTSPPYGNAFSILVRALGVVRVGVAFKLRLSFLEPTKTRGKWLKDNPPSAVVVLPRATYCGR 148
BLAST of mRNA_L-elsbetiae_contig9647.18625.1 vs. uniprot
Match: A0A6H5KE39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE39_9PHAE) HSP 1 Score: 132 bits (333), Expect = 2.690e-33 Identity = 52/94 (55.32%), Postives = 66/94 (70.21%), Query Frame = 2 Query: 161 GYSRRLWESIARKQVPGGGLPLCFACGRPGSRDGCMQKWRHVGNTPLWADLGVWCSTVGDAWVHERDLRADPLQVGECICCRPDCVGTMLDNFK 442 G+ ++ K+ PGGGL LCFACGRPGSRDGC +W+HVG T WA++G W + VG W HERDL+ DPL+VGECIC RPDC G ++ + Sbjct: 4 GFLGSCGRAVHGKEAPGGGLGLCFACGRPGSRDGCSSRWKHVGQTTYWAEVGEWSAMVGQEWPHERDLQGDPLKVGECICTRPDCAGGIVQKVQ 97
BLAST of mRNA_L-elsbetiae_contig9647.18625.1 vs. uniprot
Match: A0A6H5JGM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGM7_9PHAE) HSP 1 Score: 132 bits (331), Expect = 8.080e-33 Identity = 56/107 (52.34%), Postives = 73/107 (68.22%), Query Frame = 2 Query: 194 RKQVPGGGLPLCFACGRPGSRDGCMQKWRHVGNTPLWADLGVWCSTVGDAWVHERDLRADPLQVGECICCRPDCVGTMLDNFKLCQRKEELGSMGKMVVGQSSPMGR 514 ++ G L CFAC RPGSRDGC W+HV ++ WA+LG W +TVG+ W HERDL DPL+ GECIC R DCV + +K +++EE G++ MV+GQ SPMGR Sbjct: 16 KEPAAAGELRRCFACDRPGSRDGCSTNWQHVVDSEYWAELGEWSATVGEGWTHERDLVGDPLKAGECICRRADCVVNLYQRYKGRRQREEKGALHTMVIGQRSPMGR 122
BLAST of mRNA_L-elsbetiae_contig9647.18625.1 vs. uniprot
Match: D7FJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU4_ECTSI) HSP 1 Score: 108 bits (270), Expect = 3.100e-23 Identity = 73/195 (37.44%), Postives = 102/195 (52.31%), Query Frame = 2 Query: 395 ICCRPDCVGTML-------DNFKLCQRKEELGSMGKMVVGQSSP--------MGRYPSTGSQVRALLENVDIEGTVLDCCGAAKDAVDTVLTAHGLHVATNDFTSRLTA-----NSHMDAASDKFVEAY--SEYSRRPDWVVTSPPYKNAFPILKQALRLGRKGVAFKLRLTFLEPTKTRGRWLKDNPPDRIVML 913 +C RPDC+ + + + R ++L G G P + RY ++ V ALL V++EG VLD CG DA+ T L A V TND ++RL+ ++++DA+ F + ++ +RPDWV+TSPPYK A +K AL L KGVA KL L+FLEP RG WL+ NPP V Sbjct: 28 LCNRPDCLLQLYIKQLREKNKPRTKLRAQQLARHGAKWTGIPEPRKHIKRRCLDRYCTSPEAVEALLGAVELEGCVLDMCGGPGDAIATRLGAT-CKVVTNDISTRLSPGGLPPDTNLDASLASFAVDFLLAKPGQRPDWVLTSPPYKGALEYVKSALSLAAKGVALKLPLSFLEPCADRGGWLQANPPAVCVFF 221
BLAST of mRNA_L-elsbetiae_contig9647.18625.1 vs. uniprot
Match: D8LSI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI1_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 6.470e-19 Identity = 53/116 (45.69%), Postives = 72/116 (62.07%), Query Frame = 2 Query: 587 CGAAKDAVDTVLTAHGLHVATNDFTSRLTANSHMDAASDKFVEAY-SEYS-RRPDWVVTSPPYKNAFPILKQALRLGRKGVAFKLRLTFLEPTKTRGRWLKDNPPDRIVMLPRATY 928 CG DAV T L + + TND +S A+++++A+ + F E + + YS +RP+WVVTSPPY A +K A+ L KGVAFK+ + FLEP RG WL+ NPP V L RA Y Sbjct: 2 CGGPTDAVATRLRST-CEILTNDVSSGRPADTNLNASLELFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMSLATKGVAFKMPIFFLEPCADRGGWLQTNPPSVCVFLRRAKY 116
BLAST of mRNA_L-elsbetiae_contig9647.18625.1 vs. uniprot
Match: D7FTC1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC1_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 8.260e-19 Identity = 35/60 (58.33%), Postives = 43/60 (71.67%), Query Frame = 2 Query: 182 ESIARKQVPGGGLPLCFACGRPGSRDGCMQKWRHVGNTPLWADLGVWCSTVGDAWVHERD 361 ++ K+ PGGG LCFACGRPGSRDGC +W+HVG WA+LG W + VG+ W HERD Sbjct: 7 RAVHGKEAPGGGPGLCFACGRPGSRDGCSSRWKHVGQGTYWAELGEWSAIVGEEWPHERD 66
BLAST of mRNA_L-elsbetiae_contig9647.18625.1 vs. uniprot
Match: A0A252D8B1_9NOSO (Uncharacterized protein n=1 Tax=Nostoc sp. RF31YmG TaxID=1932668 RepID=A0A252D8B1_9NOSO) HSP 1 Score: 90.5 bits (223), Expect = 2.170e-17 Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = 2 Query: 515 YPSTGSQVRALLENVDIEGTVLDCCGAAKDAVDTVLTAHGLHVATNDFTSRLTANSHMDAASDKFVEAYSEYSRRPDWVVTSPPYKNAFPILKQALRLGRKGVAFKLRLTFLEPTKTRGRWLKDNPPDRIVMLPRATY 928 Y + S V LL ++DI GT+L+ C + A+ L GL V T D N DA + ++ + Y DWVVT+PP+ +A IL +A GVAF LRL++LEP K RG+WL ++PP ++++LPR ++ Sbjct: 19 YFTPTSAVDTLLNHIDITGTLLEPCNGS-GAISNRLKEDGLSVITTDIAD----NPQDDATTHQYWQRQKPY----DWVVTNPPFDSASKILPKAYEYASVGVAFLLRLSYLEPCKDRGQWLAEHPP-KLIVLPRISF 146
BLAST of mRNA_L-elsbetiae_contig9647.18625.1 vs. uniprot
Match: A0A6H5L6X2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6X2_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 3.220e-15 Identity = 48/77 (62.34%), Postives = 53/77 (68.83%), Query Frame = -1 Query: 685 GSITILSGGLSFSHRPLVLVGSRNVSLNLNATPLRPSRNACFKIGKAFLYGGLVTTQSGRREYSEYASTNLSDAASI 915 G T ++ SH PLVLVGSR VSL+LNATP RP A FKI KA LYGGLVTT SGRR S+ STN+S ASI Sbjct: 160 GMTTPVAEAKHLSHCPLVLVGSRKVSLSLNATPTRPILKARFKIAKACLYGGLVTTHSGRRPSSQKVSTNVSVVASI 236
BLAST of mRNA_L-elsbetiae_contig9647.18625.1 vs. uniprot
Match: A0A6H5K6T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6T5_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 1.750e-14 Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 2 Query: 818 GVAFKLRLTFLEPTKTRGRWLKDNPPDRIVMLPRATYRSR 937 GVAFKLRLTFL P K+RGRWLKDNPPDRIVMLPRATYR R Sbjct: 2 GVAFKLRLTFLGPAKSRGRWLKDNPPDRIVMLPRATYRRR 41
BLAST of mRNA_L-elsbetiae_contig9647.18625.1 vs. uniprot
Match: A0A6H5L5Q9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Q9_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 1.640e-13 Identity = 40/67 (59.70%), Postives = 43/67 (64.18%), Query Frame = -3 Query: 677 PPPSGFGWL*KC*PQLECHPLAPEPQRLL*NWEGVLVRRARHDPVRTTRVLRVCFDELVRRGVHMTV 877 P PSGFG L K PQLECHP P PQ N EGVLV RARHDP+R L + VRRG+HMTV Sbjct: 172 PLPSGFGGLKKSQPQLECHPHTPNPQSTFQNSEGVLVWRARHDPLRAPPFLAEGIHKCVRRGIHMTV 238 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9647.18625.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9647.18625.1 >prot_L-elsbetiae_contig9647.18625.1 ID=prot_L-elsbetiae_contig9647.18625.1|Name=mRNA_L-elsbetiae_contig9647.18625.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=225bp MQKWRHVGNTPLWADLGVWCSTVGDAWVHERDLRADPLQVGECICCRPDCback to top mRNA from alignment at L-elsbetiae_contig9647:4151..6609- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9647.18625.1 ID=mRNA_L-elsbetiae_contig9647.18625.1|Name=mRNA_L-elsbetiae_contig9647.18625.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2459bp|location=Sequence derived from alignment at L-elsbetiae_contig9647:4151..6609- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9647:4151..6609- >mRNA_L-elsbetiae_contig9647.18625.1 ID=mRNA_L-elsbetiae_contig9647.18625.1|Name=mRNA_L-elsbetiae_contig9647.18625.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1350bp|location=Sequence derived from alignment at L-elsbetiae_contig9647:4151..6609- (Laminarionema elsbetiae ELsaHSoW15)back to top |