mRNA_L-elsbetiae_contig9641.18622.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9641.18622.1 vs. uniprot
Match: A0A6H5KN83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN83_9PHAE) HSP 1 Score: 339 bits (869), Expect = 1.110e-113 Identity = 196/330 (59.39%), Postives = 222/330 (67.27%), Query Frame = 1 Query: 1 MSGVDYSKWDKMANEMSDSDEEAGNHPEVTTFDEPQSVTFGGTPDSHAREGRD----------DTNPN---VAAPIDGSAGAATAAAAGKMASTTPRPKTETPINDEQLAENGAAVCRNADGGGRVLRYVWRQARAEVTVVVPVPAGTRAGDVEVSLSAKPETITEGVADLIRVSIKAAR-----------------------------ELAFQAKLDVEGKGGVDWELKDYPGTV----------------------------ASAGSGDRRGIEVVLRKHCPVPNAAVWWKSLLKGEPEIDVSAIKGRATNNHQSVWEEALGMFKEKV 780 MSGVDYSKWDKMA+EMSDSD++ GN+PEVTTFD+PQSVTFGGT S A EG D DT P+ VAAP DGS GA AAA G TTP P+ + I+DE+L ENGAAV +A+ G + L+YVWRQ RAEV VVVPVPAGTRAGDVEVSL AKPETI EGVADLIRV++KA R ELAFQAKL E +G V+WELKDYPGT +S+ +GDRRG+E+VL+KHCPVPNAAVWWKSLLKG PEIDV+AIKGRATNNHQSVWEEALGMFKE+V Sbjct: 1 MSGVDYSKWDKMASEMSDSDDDNGNNPEVTTFDQPQSVTFGGTSASQAAEGWDGASDDSGAHPDTTPSSSGVAAPADGSTGAVAAAATG----TTPTPQVKPLISDERLTENGAAVRGDANAGRQALQYVWRQTRAEVVVVVPVPAGTRAGDVEVSLRAKPETIAEGVADLIRVAVKATRGRDGAASRELGTAATAPGGGTKLVPVLEGELAFQAKLGAEDEGEVEWELKDYPGTAVARDDPDSSGDPVGSAPPPAPAAGAREASSSSNGDRRGVEIVLKKHCPVPNAAVWWKSLLKGGPEIDVAAIKGRATNNHQSVWEEALGMFKEQV 326
BLAST of mRNA_L-elsbetiae_contig9641.18622.1 vs. uniprot
Match: A0A836CJH1_9STRA (CS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJH1_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.790e-31 Identity = 103/287 (35.89%), Postives = 136/287 (47.39%), Query Frame = 1 Query: 10 VDYSKWDKMANEMSDS-DEEAGNHPEVTTFDEPQSVTFGG--TPDSHAREGRDDTNPNVAAPIDGSAGAATAAAAGKMASTTPRPKTETPINDEQLAENGAAVCRNADGGGRVLRYVWRQARAEVTVVVPVPAGTRAGDVEVSLSAKPETITEG----VADLIRVSIKAA----RELAFQAKLDVEGKGGVDWELKDY--PGTVA--------------SAGSGDRRGIEVVLRKHCPVPNAAVWWKSLLKGEPEIDVSAIKGR---ATNNHQSVWEEALGMFKEKV 780 VDYSKWDKMA +MSDS DEE G+ P VT FD P SVT+GG P+ S+ A K A+ T +P L NGAAV D G Y W Q+R +V + V P GTRA +VEV +++ T + ++VS K A +L + LD + VDW L+D P A S+ R I V LRKH P+ AA+WWK +KG P ID++AI+GR + Q VW+EA+ F+ +V Sbjct: 2 VDYSKWDKMAADMSDSEDEEGGSKPVVTAFDNPTSVTWGGGDAPEEERLXXXXXXXXXXXXXXXXSSAGTPGADDSKRAALTDKP-----ARLLTLTRNGAAV--QDDCGA--YTYFWSQSRGDVAITVVAPPGTRASEVEVKVTSDASAPTLAAQAPLGHHLKVSAKGAILLEGDLTYPVALDPDDPESVDWVLQDLGLPARPAPESAVESDVSTADQSSERSPARAITVTLRKHSPIAGAALWWKGAVKGGPTIDMAAIEGRDAKGASASQKVWDEAMEGFRARV 279
BLAST of mRNA_L-elsbetiae_contig9641.18622.1 vs. uniprot
Match: X6NBK4_RETFI (CS domain-containing protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NBK4_RETFI) HSP 1 Score: 102 bits (255), Expect = 4.050e-22 Identity = 84/281 (29.89%), Postives = 134/281 (47.69%), Query Frame = 1 Query: 1 MSGVDYSKWDKMANEMSDSDEE-AGNHPEVTTFDEPQSVTFG--GTPDSHAREGRDDTNPNVAAPIDGSAGAATAAAAGKMASTTPRPKT---------------ETPINDEQLAENGAAVCRNADGGGRVLRYVWRQARAEVTVVVP-VPAGTRAGDVEVSLSAKPETITEGVADLIRVSIKAARELAFQAKLDVEGKGGVDWELKDYPGTVASAGSGDRRGIEVVLRKHCPVPNAAVWWKSLLKGEPEIDVSAIKGRATN--NHQSVWEEALGMFKEKV 780 M+G++YSKW+K+A + SDEE A N P VT D P SVT G G + + TN N + + + TA + ST PR + E+ + + L+E A V GG Y+W Q R EV + + +P T+A +++ + + T+ D I + K EL++ E G++WE+K +P + + + + + L+K N WW ++ KG+P IDV+AIK R T+ +++W+ A FKEKV Sbjct: 1 MTGINYSKWNKIAEALDSSDEESASNTPHVTKLDRPSSVTIGPTGVTINPSPSNNQSTNANNKSVVKKTIENPTAKQS--YNSTVPRQQKDQKATIVKPQNNEIIESKVKTKTLSELKAEVL--TVNGGETDEYMWSQTRDEVVLFIKNIPLSTKAKSIKIQYNEEKNTVFIQCLDKILYNNK---ELSYNIVKTKEEDCGLEWEIKTFPFCDTNGIASQMKLLTIYLKKKEFSANVITWWGNVFKGDPSIDVAAIKERKTDAKTMRNIWQSAHESFKEKV 274
BLAST of mRNA_L-elsbetiae_contig9641.18622.1 vs. uniprot
Match: L1JV05_GUITC (CS domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JV05_GUITC) HSP 1 Score: 80.5 bits (197), Expect = 3.060e-14 Identity = 77/276 (27.90%), Postives = 123/276 (44.57%), Query Frame = 1 Query: 7 GVDYSKWDKMANEMSDSDEEAGNHPEVTTFDEPQSVTFGGTPDSHAREGRDDTNPNVAAPIDGSAGAATAAA-----AGKMASTTPRPKTETPINDEQLAENGAAVCRNADGGGRVLRYVWRQARAEVTVVVPVPAGTRAGDVEVSLSAKPETITEGVADLIRVSIKAARELAFQAKLDVEGKGGVDWELKDYPGTVASAGSGDRRGIEVVLRKHCP-------VP---NAAVWWKSLLKGEPEIDVSAIKGRATNN---HQSVWEEALGMFKEKV 780 G+DYSKWD+ E+SDS++E ++ G N++ P++ GK T R + +E++A + A + RN GG +Y+W Q R EV + +PAGTRA D+ V L+++ + + +I R+L++ V + +DWELKD+ RR + + LRK P +P + +WWK + G+ EIDV++I R N +QSVW+EA F+ V Sbjct: 28 GLDYSKWDRFTEEVSDSEDE-----DMXXXXXXXXXXRGS---------------NISMPVEXXXXXXXXXXXXXXPVGKEPLTEQRSSGTSASREEEIASSLARMSRN---GGTCDQYIWSQDRHEVVINFFLPAGTRAKDMSVRLTSEKHLLAKNQEVVI-----IDRDLSYPV---VNNEDSLDWELKDF--------HDGRRLLRISLRKTLPGMTSLPALPVEESVILWWKCVFVGDAEIDVASIPDRKKKNLSTNQSVWKEAHEKFQHIV 264
BLAST of mRNA_L-elsbetiae_contig9641.18622.1 vs. uniprot
Match: A0A7S4UCT6_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UCT6_GUITH) HSP 1 Score: 79.7 bits (195), Expect = 1.180e-13 Identity = 73/263 (27.76%), Postives = 120/263 (45.63%), Query Frame = 1 Query: 7 GVDYSKWDKMANEMSDSDEEAGNHPEVTTFDEPQSVTFGGTPDSHAREGRDDTNPNVAAPIDGSAGAATAAAAGKMASTTPRPKTETPINDEQLAENGAAVCRNADGGGRVLRYVWRQARAEVTVVVPVPAGTRAGDVEVSLSAKPETITEGVADLIRVSIKAARELAFQAKLDVEGKGGVDWELKDYPGTVASAGSGDRRGIE-VVLRKHCPVPNAAV-WWKSLLKGEPEIDVSAIKGRATNN---HQSVWEEALGMFKEKV 780 G+DYSKWD+ E+SDS++E ++ G N++ P++ GK T R + +E++A + A + RN GG +Y+W Q R EV + +PAGTRA D+ V L+++ + + +I R+L++ V + +DWELKD+ R+ + + PV + + WWK + G+ EIDV++I R N +QSVW+EA F+E + Sbjct: 93 GLDYSKWDRFTEEVSDSEDE-----DMXXXXXXXXXXRGS---------------NISMPVEXXXXXXQPV--GKEPLTEQRSSGTSASREEEIASSLARMSRN---GGTCDQYIWSQDRHEVVINFFLPAGTRAKDMSVRLTSEKHLLAKNQEVVI-----IDRDLSYPV---VNNEDSLDWELKDFHDGRRLLRISLRKTLPGMTSLPALPVEESVILWWKCVFVGDAEIDVASIPDRKKKNLSTNQSVWKEAHEKFQEMI 322
BLAST of mRNA_L-elsbetiae_contig9641.18622.1 vs. uniprot
Match: A0A1J4MGJ4_9CRYT (Nuclear move domain-containing protein n=1 Tax=Cryptosporidium ubiquitum TaxID=857276 RepID=A0A1J4MGJ4_9CRYT) HSP 1 Score: 68.6 bits (166), Expect = 4.180e-10 Identity = 63/267 (23.60%), Postives = 112/267 (41.95%), Query Frame = 1 Query: 1 MSGVDYSKWDKMANEMSDSDEEAGNHPEVTTFDEPQSVTFGGTPDSHAREGRDDTNPNVAAPIDGSAGAATAAAAGKMASTTPRPKTETPINDEQLAENGAAVCRNADGGGRVLRYVWRQARAEVTVVVPVPAGTRAGDVEVSLSAKPETITEGVADLIRVSIKAARELAFQAKLDVEGKGGVDWELKDYPGTVASAGSGDRRGIEVVLRKHCPVPNAAVWWKSLLKGEPEIDVSAIKGRATNNHQS-------VWEEALGMFKEKV 780 MSG+DYSKWDK+ + + G+ VT FD PQS+T GG RE ++D+ + +D + + + E I+ + G + C Y W Q +T+++ + GT+ D++V+++ T+T G ++ E + K D + W +K+ ++ A + R + + L K + +WWK + KG E D+S ++ + WEEA F+ K+ Sbjct: 1 MSGIDYSKWDKIEISSDEESGKLGSKCNVTRFDSPQSITIGGQ-----RESKEDSLVSSNILVD------------DLKTKSVLVSREKVISLDDYVFGGKSACGKD--------YYWTQTENGLTIILEIDPGTQNKDLKVNVTEDKVTVTHGSETIL------FEEFEYGVKDDDNT---IFWSVKEVE-SLNGAQNKRSRMLVLELEKKELDTSIRLWWKKIFKGGIEADISKFSRFSSPKSEERNRKFLEAWEEAHNEFRNKI 232
BLAST of mRNA_L-elsbetiae_contig9641.18622.1 vs. uniprot
Match: A0A7S0AUT3_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0AUT3_9DINO) HSP 1 Score: 67.4 bits (163), Expect = 8.220e-10 Identity = 51/173 (29.48%), Postives = 80/173 (46.24%), Query Frame = 1 Query: 280 EQLAENGAAVCRNADGGGRVLRYVWRQARAEVTVVVPVPAGTRAGDVEVSLSAKPETITEGVADLIRVSIKAARELAFQAKLDVEGKGGVDWELKDYPGTVASAGSGDRRGIEVVLRKHCPVP---NAAVWWKSLLKGEPEIDVSAIKGR---ATNNHQSVWEEALGMFKEKV 780 E + G + + +GG RY W Q + + V VP GT++ D+ V +S +I A ++ E F+ D + DWE++ G RR + + ++K +P + VWW+ +LKGEPEIDVS I+GR A+ W +A F+E V Sbjct: 45 EGSSNAGPSWPQPTNGGSVGDRYFWSQTKDSIEVNAFVPEGTKSQDISVQVSETQVSIQAHGASILE------GEWEFKVIPDED----PDWEIRTLNG---------RRAVCLTVKK-ADMPGGMSVIVWWRKVLKGEPEIDVSNIQGRKREASETFAKAWRDAHVQFRESV 197
BLAST of mRNA_L-elsbetiae_contig9641.18622.1 vs. uniprot
Match: A0A5A8D7V1_CAFRO (CS domain-containing protein n=4 Tax=Sar TaxID=2698737 RepID=A0A5A8D7V1_CAFRO) HSP 1 Score: 63.5 bits (153), Expect = 5.600e-8 Identity = 48/151 (31.79%), Postives = 69/151 (45.70%), Query Frame = 1 Query: 277 DEQLAENGAAVCRNADGGGRVLRYVWRQARAEVTVVVPVPAGTRAGDVEVSLSAKPETITEGVADLIRVSIKAARELAFQAKLDVEGKGGVDWELKDYPGTVASAGSGDRRGIEVVLRKHCPVPNAAVWWKSLLKGEPEIDVSAIKGRATN 729 +E + G +G R L Y W Q EVT+ VPVPAGTR D+ VS KPET++ G +K A + W ++D P ASAG G R + V+L K WW ++ EP++D+S ++ +N Sbjct: 176 EEAASGEGGIPPSEGNGYSRDL-YSWTQTLKEVTITVPVPAGTRGKDLSVSF--KPETLSVG--------LKGAASVLDGPLFAAVAVADCTWTIEDAP---ASAGGG--RLVTVMLAK----AYGMAWWPHVVTTEPKLDLSKVEPENSN 306
BLAST of mRNA_L-elsbetiae_contig9641.18622.1 vs. uniprot
Match: A0A2P4YYV1_9CRYT (CS domain protein n=4 Tax=Cryptosporidium TaxID=5806 RepID=A0A2P4YYV1_9CRYT) HSP 1 Score: 62.4 bits (150), Expect = 6.560e-8 Identity = 61/268 (22.76%), Postives = 110/268 (41.04%), Query Frame = 1 Query: 1 MSGVDYSKWDKMANEMSDSDEEAGNHPEVTTFDEPQSVTFGGTPDSHAREGRDDTNPNVAAPIDGSAGAATAAAAGKMASTTPRPKTETPINDEQLAENGAAVCRNADGGGRVLRYVWRQARAEVTVVVPVPAGTRAGDVEVSLSAKPETITEGVADLIRVSIKAARELAFQAKLDVEGKGGVDWELKDYPGTVASAGSGDRRGIEVVLRKHCPVPNAA-VWWKSLLKGEPEIDVSAIKGRATNNHQS-------VWEEALGMFKEKV 780 MSG+DYSKWDK+ + E++ + VT FD P S+TFGG H E +D N ++ + P ++ E++ V G+ Y W Q ++T+V+ + ++ D +V+++ TI G+ ++ + ++ K D + W +KD + V+ + + N+ +WWK + KG E D+S ++N + VWE+A F+ K+ Sbjct: 1 MSGIDYSKWDKIEISSDEESEKSVSRCNVTRFDSPHSITFGG----HI-ESEEDNKVNSDVKVE------------EFKKIEPGH-----VSREKILSLNDYVFGGKSKNGK--NYYWTQTENDLTIVIEISPEMQSKDFKVNVTESDITIMYGLETIL------LEKFEYEVKYDDNT---IFWSIKDVESFDKVQNKRIINKMLVLELEKKELNNSIRIWWKRIFKGGIETDISKFNRFTSSNKEERNKKFLQVWEKAHDEFRNKI 235
BLAST of mRNA_L-elsbetiae_contig9641.18622.1 vs. uniprot
Match: A0A8K0DRG7_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0DRG7_9ROSA) HSP 1 Score: 62.0 bits (149), Expect = 1.410e-7 Identity = 51/158 (32.28%), Postives = 73/158 (46.20%), Query Frame = 1 Query: 268 PINDEQLAENGAAVCRNADGGGRVLRYVWRQARAEVTVVVPVPAGTRAGDVE---------VSLSAKPETITEGVADLIRVSIKAARELAFQAKLDVEGKGGVDWELKDYPGTVASAGSGDRRGIEVVLRKHCPVPNAAVWWKSLLKGEPEIDVSAIK 714 P+ E+ E+GA V N G + +Y W Q EVTVV+PVPAGT++ +E V L +P I EG +L R SIK W L+D ++ + ++L KH + WWKSL+KG+PEID ++ Sbjct: 117 PVEVEKKEESGARVP-NLGNGLDLEKYSWTQTLQEVTVVIPVPAGTKSRFIECEIKKNRLKVGLKGQPPII-EG--ELFR-SIKPDDSY---------------WSLED------------QKAVSILLTKH----DQMEWWKSLVKGDPEIDTQKVE 238 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9641.18622.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9641.18622.1 >prot_L-elsbetiae_contig9641.18622.1 ID=prot_L-elsbetiae_contig9641.18622.1|Name=mRNA_L-elsbetiae_contig9641.18622.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=260bp MSGVDYSKWDKMANEMSDSDEEAGNHPEVTTFDEPQSVTFGGTPDSHAREback to top mRNA from alignment at L-elsbetiae_contig9641:5822..6778- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9641.18622.1 ID=mRNA_L-elsbetiae_contig9641.18622.1|Name=mRNA_L-elsbetiae_contig9641.18622.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=957bp|location=Sequence derived from alignment at L-elsbetiae_contig9641:5822..6778- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9641:5822..6778- >mRNA_L-elsbetiae_contig9641.18622.1 ID=mRNA_L-elsbetiae_contig9641.18622.1|Name=mRNA_L-elsbetiae_contig9641.18622.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1560bp|location=Sequence derived from alignment at L-elsbetiae_contig9641:5822..6778- (Laminarionema elsbetiae ELsaHSoW15)back to top |